RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 RALGAPA2Q2PPJ7 1873 aa6.42□□□□□ -1.38
VCAN-208ENST00000512590 ADCYAP1P18509 176 aa6.42□□□□□ -1.38
VCAN-208ENST00000512590 M0QY20 66 aa6.42□□□□□ -1.38
VCAN-208ENST00000512590 EML6Q6ZMW3 1958 aa6.42□□□□□ -1.38
VCAN-208ENST00000512590 NBDYA0A0U1RRE5 68 aa6.41□□□□□ -1.38
VCAN-208ENST00000512590 A0A1W2PNU3 283 aaPredicted RBP6.41□□□□□ -1.38
VCAN-208ENST00000512590 ZNF22P17026 224 aaPredicted RBP6.41□□□□□ -1.38
VCAN-208ENST00000512590 CRIP2P52943 208 aaPredicted RBP6.41□□□□□ -1.38
VCAN-208ENST00000512590 LINC01554Q52M75 96 aa6.41□□□□□ -1.38
VCAN-208ENST00000512590 SPATA3Q8NHX4 192 aa6.41□□□□□ -1.38
VCAN-208ENST00000512590 C1orf147Q96MC9 270 aaPredicted RBP6.41□□□□□ -1.38
VCAN-208ENST00000512590 CHTF8P0CG12 524 aa6.41□□□□□ -1.38
VCAN-208ENST00000512590 SMIM11BQ8TCY0 68 aa6.41□□□□□ -1.38
VCAN-208ENST00000512590 TTTY13Q9BZ97 58 aa6.41□□□□□ -1.38
VCAN-208ENST00000512590 NOTCH3Q9UM47 2321 aa6.41□□□□□ -1.38
VCAN-208ENST00000512590 FXYD2P54710 66 aa6.4□□□□□ -1.38
VCAN-208ENST00000512590 PCNX2A6NKB5 2137 aa6.4□□□□□ -1.38
VCAN-208ENST00000512590 THSD7BQ9C0I4 1608 aa6.4□□□□□ -1.38
VCAN-208ENST00000512590 PTPRFP10586 1907 aa6.4□□□□□ -1.38
VCAN-208ENST00000512590 C22orf24Q9Y442 160 aa6.4□□□□□ -1.38
VCAN-208ENST00000512590 HIGD1BQ9P298 99 aa6.4□□□□□ -1.39
VCAN-208ENST00000512590 HEATR5AQ86XA9 2040 aa6.4□□□□□ -1.39
VCAN-208ENST00000512590 GREB1Q4ZG55 1949 aa6.39□□□□□ -1.39
VCAN-208ENST00000512590 PLXNA3P51805 1871 aa6.39□□□□□ -1.39
VCAN-208ENST00000512590 ATRXP46100 2492 aa6.39□□□□□ -1.39
VCAN-208ENST00000512590 SMR3BP02814 79 aaPredicted RBP6.39□□□□□ -1.39
VCAN-208ENST00000512590 PRM2P04554 102 aa6.39□□□□□ -1.39
VCAN-208ENST00000512590 LINC00315P59091 139 aa6.38□□□□□ -1.39
VCAN-208ENST00000512590 KRTAP24-1Q3LI83 254 aa6.38□□□□□ -1.39
VCAN-208ENST00000512590 LINC00336Q6ZUF6 198 aa6.38□□□□□ -1.39
VCAN-208ENST00000512590 Q8NBF4 154 aa6.38□□□□□ -1.39
VCAN-208ENST00000512590 LINC00173Q6ZV60 143 aa6.38□□□□□ -1.39
VCAN-208ENST00000512590 TSC2P49815 1807 aa6.38□□□□□ -1.39
VCAN-208ENST00000512590 SPTAN1Q13813 2472 aaKnown RBP6.38□□□□□ -1.39
VCAN-208ENST00000512590 KIF25-AS1Q9Y6Z4 181 aa6.38□□□□□ -1.39
VCAN-208ENST00000512590 TMEM131Q92545 1883 aa6.38□□□□□ -1.39
VCAN-208ENST00000512590 ZNF80P51504 273 aaPredicted RBP6.38□□□□□ -1.39
VCAN-208ENST00000512590 C9orf92A6NGG3 77 aa6.37□□□□□ -1.39
VCAN-208ENST00000512590 PMAIP1Q13794 54 aa6.37□□□□□ -1.39
VCAN-208ENST00000512590 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
VCAN-208ENST00000512590 LINC00304Q8N9R0 145 aa6.37□□□□□ -1.39
VCAN-208ENST00000512590 UQCRQO14949 82 aa6.36□□□□□ -1.39
VCAN-208ENST00000512590 Q6ZS46 218 aa6.36□□□□□ -1.39
VCAN-208ENST00000512590 NTM-AS1Q6ZSK4 140 aa6.36□□□□□ -1.39
VCAN-208ENST00000512590 TRBV7-7A0A0K0K1E9 115 aa6.36□□□□□ -1.39
VCAN-208ENST00000512590 WFDC2Q14508 124 aa6.36□□□□□ -1.39
VCAN-208ENST00000512590 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
VCAN-208ENST00000512590 FAM19A4Q96LR4 140 aa6.36□□□□□ -1.39
VCAN-208ENST00000512590 Q8N6K4 173 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 C1orf64Q8NEQ6 169 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 PTH2Q96A98 100 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 PRRC2AP48634 2157 aaKnown RBP6.35□□□□□ -1.39
VCAN-208ENST00000512590 NBASA2RRP1 2371 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 IGLV8-61A0A075B6I0 122 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 FAM167A-AS1Q96KT0 104 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 C6orf48Q9UBA6 75 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 RIF1Q5UIP0 2472 aaKnown RBP6.35□□□□□ -1.39
VCAN-208ENST00000512590 WISP2O76076 250 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 IGLV1-40P01703 118 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 ODF3L2Q3SX64 289 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 CDC42SE2Q9NRR3 84 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 CACNA1HO95180 2353 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 LCTP09848 1927 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 MED12Q93074 2177 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 FSTL3O95633 263 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 Q6ZRU5 148 aa6.35□□□□□ -1.39
VCAN-208ENST00000512590 FAM208BQ5VWN6 2430 aa6.34□□□□□ -1.39
VCAN-208ENST00000512590 DOCK8Q8NF50 2099 aa6.34□□□□□ -1.39
VCAN-208ENST00000512590 LINC00242Q5T6M2 205 aa6.34□□□□□ -1.39
VCAN-208ENST00000512590 TSHBP01222 138 aa6.34□□□□□ -1.39
VCAN-208ENST00000512590 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.4
VCAN-208ENST00000512590 SSBP3-AS1Q7Z2R9 100 aa6.34□□□□□ -1.4
VCAN-208ENST00000512590 TRIAP1O43715 76 aa6.33□□□□□ -1.4
VCAN-208ENST00000512590 Q9UF83 564 aa6.33□□□□□ -1.4
VCAN-208ENST00000512590 PLXND1Q9Y4D7 1925 aa6.33□□□□□ -1.4
VCAN-208ENST00000512590 TMEM254Q8TBM7 123 aa6.33□□□□□ -1.4
VCAN-208ENST00000512590 AVPP01185 164 aa6.32□□□□□ -1.4
VCAN-208ENST00000512590 IGLV4-60A0A075B6I1 120 aa6.32□□□□□ -1.4
VCAN-208ENST00000512590 OTOGLQ3ZCN5 2332 aa6.32□□□□□ -1.4
VCAN-208ENST00000512590 MALRD1Q5VYJ5 2156 aa6.32□□□□□ -1.4
VCAN-208ENST00000512590 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
VCAN-208ENST00000512590 PHF3Q92576 2039 aaKnown RBP6.31□□□□□ -1.4
VCAN-208ENST00000512590 Q6ZSA8 131 aa6.31□□□□□ -1.4
VCAN-208ENST00000512590 Q8N814 137 aa6.31□□□□□ -1.4
VCAN-208ENST00000512590 PCNTO95613 3336 aa6.3□□□□□ -1.4
VCAN-208ENST00000512590 SIP14410 1827 aa6.3□□□□□ -1.4
VCAN-208ENST00000512590 MUC6Q6W4X9 2439 aa6.3□□□□□ -1.4
VCAN-208ENST00000512590 KRTAP27-1Q3LI81 207 aa6.3□□□□□ -1.4
VCAN-208ENST00000512590 C1orf195Q5TG92 126 aa6.3□□□□□ -1.4
VCAN-208ENST00000512590 PRR3P79522 188 aaKnown RBP6.29□□□□□ -1.4
VCAN-208ENST00000512590 PSPHP1O15172 72 aa6.29□□□□□ -1.4
VCAN-208ENST00000512590 SOSTDC1Q6X4U4 206 aa6.29□□□□□ -1.4
VCAN-208ENST00000512590 ADAMTS9Q9P2N4 1935 aa6.29□□□□□ -1.4
VCAN-208ENST00000512590 LINC00167Q96N53 147 aa6.29□□□□□ -1.4
VCAN-208ENST00000512590 ANK1P16157 1881 aa6.29□□□□□ -1.4
VCAN-208ENST00000512590 COA6Q5JTJ3 125 aaKnown RBP6.29□□□□□ -1.4
VCAN-208ENST00000512590 CSNK1G2-AS1Q8NCQ2 148 aa6.29□□□□□ -1.4
VCAN-208ENST00000512590 MED13Q9UHV7 2174 aa6.28□□□□□ -1.4
VCAN-208ENST00000512590 DOCK11Q5JSL3 2073 aa6.28□□□□□ -1.4
VCAN-208ENST00000512590 IGLV6-57P01721 117 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms