RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 AMELXQ99217 191 aa3.35□□□□□ -1.87
CHD1-208ENST00000512392 DIP2AQ14689 1571 aa3.35□□□□□ -1.87
CHD1-208ENST00000512392 ZFHX3Q15911 3703 aa3.35□□□□□ -1.87
CHD1-208ENST00000512392 SPAG17Q6Q759 2223 aa3.35□□□□□ -1.87
CHD1-208ENST00000512392 MYO7BQ6PIF6 2116 aa3.35□□□□□ -1.87
CHD1-208ENST00000512392 COL4A2P08572 1712 aa3.34□□□□□ -1.87
CHD1-208ENST00000512392 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
CHD1-208ENST00000512392 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
CHD1-208ENST00000512392 GDF5OSQ5U4N7 250 aa3.34□□□□□ -1.87
CHD1-208ENST00000512392 ATP5EP2Q5VTU8 51 aa3.34□□□□□ -1.88
CHD1-208ENST00000512392 SAMD9Q5K651 1589 aa3.33□□□□□ -1.88
CHD1-208ENST00000512392 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
CHD1-208ENST00000512392 KRTAP13-2Q52LG2 175 aa3.33□□□□□ -1.88
CHD1-208ENST00000512392 SPINK14Q6IE38 97 aa3.33□□□□□ -1.88
CHD1-208ENST00000512392 R4GMQ9 66 aa3.33□□□□□ -1.88
CHD1-208ENST00000512392 PRRC2AP48634 2157 aaKnown RBP3.33□□□□□ -1.88
CHD1-208ENST00000512392 TET1Q8NFU7 2136 aa3.33□□□□□ -1.88
CHD1-208ENST00000512392 IGKV2-40A0A087WW87 121 aaPredicted RBP3.32□□□□□ -1.88
CHD1-208ENST00000512392 IGKV2D-40P01614 121 aaPredicted RBP3.32□□□□□ -1.88
CHD1-208ENST00000512392 DEFB132Q7Z7B7 95 aa3.32□□□□□ -1.88
CHD1-208ENST00000512392 LRP6O75581 1613 aa3.32□□□□□ -1.88
CHD1-208ENST00000512392 GCC2Q8IWJ2 1684 aa3.32□□□□□ -1.88
CHD1-208ENST00000512392 IGLV4-60A0A075B6I1 120 aa3.32□□□□□ -1.88
CHD1-208ENST00000512392 TRGV4A0A0C4DH28 118 aa3.32□□□□□ -1.88
CHD1-208ENST00000512392 KRTAP1-4P0C5Y4 121 aa3.32□□□□□ -1.88
CHD1-208ENST00000512392 COL4A1P02462 1669 aa3.32□□□□□ -1.88
CHD1-208ENST00000512392 DOCK10Q96BY6 2186 aa3.32□□□□□ -1.88
CHD1-208ENST00000512392 TNRC6BQ9UPQ9 1833 aaKnown RBP3.31□□□□□ -1.88
CHD1-208ENST00000512392 ZNF831Q5JPB2 1677 aa3.31□□□□□ -1.88
CHD1-208ENST00000512392 DEFB107AQ8IZN7 70 aa3.31□□□□□ -1.88
CHD1-208ENST00000512392 ALS2Q96Q42 1657 aa3.31□□□□□ -1.88
CHD1-208ENST00000512392 H3BRN7 92 aa3.31□□□□□ -1.88
CHD1-208ENST00000512392 IGLV6-57P01721 117 aa3.31□□□□□ -1.88
CHD1-208ENST00000512392 C5orf56Q8N8D9 126 aa3.31□□□□□ -1.88
CHD1-208ENST00000512392 V9GYV3 84 aa3.31□□□□□ -1.88
CHD1-208ENST00000512392 ADAMTS9Q9P2N4 1935 aa3.31□□□□□ -1.88
CHD1-208ENST00000512392 SYCP2Q9BX26 1530 aa3.3□□□□□ -1.88
CHD1-208ENST00000512392 GPR179Q6PRD1 2367 aa3.3□□□□□ -1.88
CHD1-208ENST00000512392 SDK1Q7Z5N4 2213 aa3.3□□□□□ -1.88
CHD1-208ENST00000512392 PLCH1Q4KWH8 1693 aa3.3□□□□□ -1.88
CHD1-208ENST00000512392 PCDH15Q96QU1 1955 aa3.3□□□□□ -1.88
CHD1-208ENST00000512392 CTXND1A0A1B0GTU2 59 aa3.29□□□□□ -1.88
CHD1-208ENST00000512392 HCRTO43612 131 aa3.29□□□□□ -1.88
CHD1-208ENST00000512392 LINC00208Q96KT6 92 aa3.29□□□□□ -1.88
CHD1-208ENST00000512392 PLAC8Q9NZF1 115 aa3.29□□□□□ -1.88
CHD1-208ENST00000512392 LOC285556D6RIA3 1793 aa3.29□□□□□ -1.88
CHD1-208ENST00000512392 POLR1AO95602 1720 aaPredicted RBP3.29□□□□□ -1.88
CHD1-208ENST00000512392 IFT172Q9UG01 1749 aa3.29□□□□□ -1.88
CHD1-208ENST00000512392 NKTRP30414 1462 aaKnown RBP3.29□□□□□ -1.88
CHD1-208ENST00000512392 HMGA1P17096 107 aaKnown RBP3.29□□□□□ -1.88
CHD1-208ENST00000512392 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
CHD1-208ENST00000512392 HCP5Q6MZN7 132 aa3.29□□□□□ -1.88
CHD1-208ENST00000512392 DNAJC13O75165 2243 aa3.29□□□□□ -1.88
CHD1-208ENST00000512392 SHPRHQ149N8 1683 aa3.28□□□□□ -1.88
CHD1-208ENST00000512392 ADGRB2O60241 1585 aa3.28□□□□□ -1.88
CHD1-208ENST00000512392 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.28□□□□□ -1.88
CHD1-208ENST00000512392 ZNF137PP52743 207 aa3.28□□□□□ -1.88
CHD1-208ENST00000512392 FXYD4P59646 89 aa3.28□□□□□ -1.88
CHD1-208ENST00000512392 WFDC6Q9BQY6 131 aa3.28□□□□□ -1.88
CHD1-208ENST00000512392 ZNF236Q9UL36 1845 aa3.28□□□□□ -1.88
CHD1-208ENST00000512392 NHSL1Q5SYE7 1610 aa3.28□□□□□ -1.88
CHD1-208ENST00000512392 USP32Q8NFA0 1604 aa3.28□□□□□ -1.88
CHD1-208ENST00000512392 MDC1Q14676 2089 aaKnown RBP3.28□□□□□ -1.88
CHD1-208ENST00000512392 ATP7BP35670 1465 aa3.28□□□□□ -1.89
CHD1-208ENST00000512392 IFI6P09912 130 aa3.27□□□□□ -1.89
CHD1-208ENST00000512392 SPINK7P58062 85 aa3.27□□□□□ -1.89
CHD1-208ENST00000512392 ATXN8Q156A1 80 aa3.27□□□□□ -1.89
CHD1-208ENST00000512392 Q96NJ1 140 aa3.27□□□□□ -1.89
CHD1-208ENST00000512392 ANAPC11Q9NYG5 84 aa3.27□□□□□ -1.89
CHD1-208ENST00000512392 CROCC2H7BZ55 1655 aa3.27□□□□□ -1.89
CHD1-208ENST00000512392 IQGAP2Q13576 1575 aa3.27□□□□□ -1.89
CHD1-208ENST00000512392 UQCR11O14957 56 aa3.27□□□□□ -1.89
CHD1-208ENST00000512392 TRAV1-2A0A0B4J238 106 aa3.26□□□□□ -1.89
CHD1-208ENST00000512392 SNRPGP15A8MWD9 76 aa3.25□□□□□ -1.89
CHD1-208ENST00000512392 ZNF625Q96I27 306 aaPredicted RBP3.25□□□□□ -1.89
CHD1-208ENST00000512392 SPRR4Q96PI1 79 aa3.25□□□□□ -1.89
CHD1-208ENST00000512392 KIAA0556O60303 1618 aa3.25□□□□□ -1.89
CHD1-208ENST00000512392 SHROOM3Q8TF72 1996 aa3.25□□□□□ -1.89
CHD1-208ENST00000512392 CDC42BPAQ5VT25 1732 aa3.25□□□□□ -1.89
CHD1-208ENST00000512392 IGKV4-1P06312 121 aa3.25□□□□□ -1.89
CHD1-208ENST00000512392 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
CHD1-208ENST00000512392 LINC00322Q6ZN03 302 aaPredicted RBP3.25□□□□□ -1.89
CHD1-208ENST00000512392 Q6ZRN7 208 aaPredicted RBP3.25□□□□□ -1.89
CHD1-208ENST00000512392 TMEM14CQ9P0S9 112 aa3.25□□□□□ -1.89
CHD1-208ENST00000512392 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
CHD1-208ENST00000512392 UGGT1Q9NYU2 1555 aa3.24□□□□□ -1.89
CHD1-208ENST00000512392 PARP4Q9UKK3 1724 aaKnown RBP3.24□□□□□ -1.89
CHD1-208ENST00000512392 UBR3Q6ZT12 1888 aa3.24□□□□□ -1.89
CHD1-208ENST00000512392 PHRF1Q9P1Y6 1649 aaKnown RBP3.24□□□□□ -1.89
CHD1-208ENST00000512392 IGKV2-28A0A075B6P5 120 aa3.23□□□□□ -1.89
CHD1-208ENST00000512392 TRGV2A0A075B6R0 118 aa3.23□□□□□ -1.89
CHD1-208ENST00000512392 LOC110117498A0A087WWA1 95 aa3.23□□□□□ -1.89
CHD1-208ENST00000512392 J3QRE1 110 aa3.23□□□□□ -1.89
CHD1-208ENST00000512392 IGKV2D-28P01615 120 aa3.23□□□□□ -1.89
CHD1-208ENST00000512392 MGPP08493 103 aa3.23□□□□□ -1.89
CHD1-208ENST00000512392 PRR9Q5T870 116 aa3.23□□□□□ -1.89
CHD1-208ENST00000512392 MYO7AQ13402 2215 aa3.23□□□□□ -1.89
CHD1-208ENST00000512392 ZMYM4Q5VZL5 1548 aa3.23□□□□□ -1.89
CHD1-208ENST00000512392 FREM1Q5H8C1 2179 aa3.23□□□□□ -1.89
CHD1-208ENST00000512392 ADCY10Q96PN6 1610 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms