RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 IGKV2-29A2NJV5 120 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-217ENST00000512274 F5H768 121 aa7.15□□□□□ -1.26
PDLIM5-217ENST00000512274 CCL25O15444 150 aa7.15□□□□□ -1.26
PDLIM5-217ENST00000512274 COX8AP10176 69 aa7.15□□□□□ -1.26
PDLIM5-217ENST00000512274 ZC2HC1BQ5TFG8 222 aa7.15□□□□□ -1.26
PDLIM5-217ENST00000512274 C2orf88Q9BSF0 95 aa7.15□□□□□ -1.26
PDLIM5-217ENST00000512274 A0A096LPF7 62 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 NBDYA0A0U1RRE5 68 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 hDV102S1A0JD36 115 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 E9PLD3 99 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 UBE2L6O14933 153 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 SIVA1O15304 175 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 UBE2D1P51668 147 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 MAJINQ3KP22 176 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 LELP1Q5T871 98 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 BOD1L2Q8IYS8 172 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 OR5A1Q8NGJ0 315 aa7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 MRPS16Q9Y3D3 137 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-217ENST00000512274 FUSP35637 526 aaKnown RBP eCLIP7.13□□□□□ -1.27
PDLIM5-217ENST00000512274 XGP55808 180 aa7.13□□□□□ -1.27
PDLIM5-217ENST00000512274 HERVK_113P61574 105 aa7.13□□□□□ -1.27
PDLIM5-217ENST00000512274 ANKRD39Q53RE8 183 aa7.13□□□□□ -1.27
PDLIM5-217ENST00000512274 DGAT2L7PQ6IED9 249 aa7.13□□□□□ -1.27
PDLIM5-217ENST00000512274 SLC25A34Q6PIV7 304 aa7.13□□□□□ -1.27
PDLIM5-217ENST00000512274 Q6ZUT4 128 aa7.13□□□□□ -1.27
PDLIM5-217ENST00000512274 TMEM101Q96IK0 257 aa7.13□□□□□ -1.27
PDLIM5-217ENST00000512274 HERVK_113P63121 156 aa7.12□□□□□ -1.27
PDLIM5-217ENST00000512274 AMMECR1LQ6DCA0 310 aa7.12□□□□□ -1.27
PDLIM5-217ENST00000512274 STPG4Q8N801 248 aa7.12□□□□□ -1.27
PDLIM5-217ENST00000512274 C15orf53Q8NAA6 179 aa7.12□□□□□ -1.27
PDLIM5-217ENST00000512274 OPRPNQ99935 248 aaPredicted RBP7.12□□□□□ -1.27
PDLIM5-217ENST00000512274 CHAC1Q9BUX1 264 aa7.12□□□□□ -1.27
PDLIM5-217ENST00000512274 PRO1933Q9H354 126 aa7.12□□□□□ -1.27
PDLIM5-217ENST00000512274 ZNF22P17026 224 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-217ENST00000512274 HIGD1BQ9P298 99 aa7.11□□□□□ -1.27
PDLIM5-217ENST00000512274 A0A0J9YY99 117 aa7.1□□□□□ -1.27
PDLIM5-217ENST00000512274 TMEM223A0PJW6 202 aa7.1□□□□□ -1.27
PDLIM5-217ENST00000512274 LBHQ53QV2 105 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-217ENST00000512274 SERTAD4-AS1Q5TG53 156 aa7.1□□□□□ -1.27
PDLIM5-217ENST00000512274 LINC01561Q8N1V8 128 aa7.1□□□□□ -1.27
PDLIM5-217ENST00000512274 DEFB104AQ8WTQ1 72 aa7.1□□□□□ -1.27
PDLIM5-217ENST00000512274 CHCHD5Q9BSY4 110 aa7.1□□□□□ -1.27
PDLIM5-217ENST00000512274 A0A0J9YXV3 536 aa7.09□□□□□ -1.27
PDLIM5-217ENST00000512274 LINC00587B1AMM8 73 aa7.09□□□□□ -1.27
PDLIM5-217ENST00000512274 LINC00242Q5T6M2 205 aa7.09□□□□□ -1.27
PDLIM5-217ENST00000512274 LYPD5Q6UWN5 251 aa7.09□□□□□ -1.27
PDLIM5-217ENST00000512274 C14orf144Q96I85 54 aa7.09□□□□□ -1.27
PDLIM5-217ENST00000512274 IGKV2D-26A0A0A0MRZ7 120 aa7.08□□□□□ -1.28
PDLIM5-217ENST00000512274 IGLV5-39A0A0G2JS06 123 aa7.08□□□□□ -1.28
PDLIM5-217ENST00000512274 PCP4L1A6NKN8 68 aa7.08□□□□□ -1.28
PDLIM5-217ENST00000512274 H3BRM9 83 aa7.08□□□□□ -1.28
PDLIM5-217ENST00000512274 HNRNPA3P51991 378 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-217ENST00000512274 RBX1P62877 108 aa7.08□□□□□ -1.28
PDLIM5-217ENST00000512274 PLEKHB2Q96CS7 222 aa7.08□□□□□ -1.28
PDLIM5-217ENST00000512274 PLA2G2DQ9UNK4 145 aa7.08□□□□□ -1.28
PDLIM5-217ENST00000512274 IGLV4-60A0A075B6I1 120 aa7.07□□□□□ -1.28
PDLIM5-217ENST00000512274 TRAV8-6A0A0B4J262 113 aa7.07□□□□□ -1.28
PDLIM5-217ENST00000512274 LEPROTO15243 131 aa7.07□□□□□ -1.28
PDLIM5-217ENST00000512274 NMUP48645 174 aa7.07□□□□□ -1.28
PDLIM5-217ENST00000512274 HAMPP81172 84 aa7.07□□□□□ -1.28
PDLIM5-217ENST00000512274 GAGE6Q13070 117 aa7.07□□□□□ -1.28
PDLIM5-217ENST00000512274 GEMIN7Q9H840 131 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-217ENST00000512274 PRR34Q9NV39 138 aa7.07□□□□□ -1.28
PDLIM5-217ENST00000512274 IGHV3OR16-9A0A0B4J2B5 98 aa7.06□□□□□ -1.28
PDLIM5-217ENST00000512274 IGHV1-58A0A0C4DH39 117 aa7.06□□□□□ -1.28
PDLIM5-217ENST00000512274 FAM229AH3BQW9 127 aa7.06□□□□□ -1.28
PDLIM5-217ENST00000512274 MPV17L2Q567V2 206 aa7.06□□□□□ -1.28
PDLIM5-217ENST00000512274 TMEM170BQ5T4T1 132 aa7.06□□□□□ -1.28
PDLIM5-217ENST00000512274 C2orf91Q6ZV80 131 aa7.06□□□□□ -1.28
PDLIM5-217ENST00000512274 PCP2Q8IVA1 136 aa7.06□□□□□ -1.28
PDLIM5-217ENST00000512274 MYMXA0A1B0GTQ4 84 aa7.05□□□□□ -1.28
PDLIM5-217ENST00000512274 TAL2Q16559 108 aa7.05□□□□□ -1.28
PDLIM5-217ENST00000512274 DNAH5Q8TE73 4624 aa7.05□□□□□ -1.28
PDLIM5-217ENST00000512274 MYCBP2O75592 4640 aa7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 A0A087WZ39 114 aa7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 LINC00959A0A1B0GUT2 108 aa7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 J3QQQ9 107 aa7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 K7EP13 123 aa7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 RNASE13Q5GAN3 156 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 LINC01556Q5JQF7 62 aa7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 SFTA2Q6UW10 78 aa7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 LINC00469Q8N7U9 141 aa7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 UPK3BQ9BT76 320 aa7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 CDKN2A-AS1Q9UH64 79 aa7.04□□□□□ -1.28
PDLIM5-217ENST00000512274 TRAV8-4A0A0B4J246 113 aa7.03□□□□□ -1.28
PDLIM5-217ENST00000512274 KRTAP29-1A8MX34 341 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-217ENST00000512274 M0R143 59 aa7.03□□□□□ -1.28
PDLIM5-217ENST00000512274 IGHV3-30-3P0DP02 117 aa7.03□□□□□ -1.28
PDLIM5-217ENST00000512274 KRTAP10-1P60331 282 aa7.03□□□□□ -1.28
PDLIM5-217ENST00000512274 SS18Q15532 418 aa7.03□□□□□ -1.28
PDLIM5-217ENST00000512274 KRTAP1-5Q9BYS1 174 aa7.03□□□□□ -1.28
PDLIM5-217ENST00000512274 TRAV13-1A0A0B4J241 112 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 SMIM1B2RUZ4 78 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 TMEM262E9PQX1 116 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 DNAH10OSP0CZ25 163 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 LGALS3P17931 250 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 CTAG1AP78358 180 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 HSD52Q0P140 79 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms