RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 HIGD2BQ4VC39 106 aa10.02□□□□□ -0.8
SQSTM1-214ENST00000512234 LINC00526Q96FQ7 95 aa10.02□□□□□ -0.8
SQSTM1-214ENST00000512234 SS18Q15532 418 aa10.02□□□□□ -0.81
SQSTM1-214ENST00000512234 PDZD11Q5EBL8 140 aa10.02□□□□□ -0.81
SQSTM1-214ENST00000512234 FA2HQ7L5A8 372 aa10.02□□□□□ -0.81
SQSTM1-214ENST00000512234 C15orf56Q8N910 161 aa10.02□□□□□ -0.81
SQSTM1-214ENST00000512234 LBHQ53QV2 105 aaPredicted RBP10.01□□□□□ -0.81
SQSTM1-214ENST00000512234 RYR1P21817 5038 aa10.01□□□□□ -0.81
SQSTM1-214ENST00000512234 IGIPA6NJ69 53 aa10□□□□□ -0.81
SQSTM1-214ENST00000512234 SLPIP03973 132 aa10□□□□□ -0.81
SQSTM1-214ENST00000512234 C5orf38Q86SI9 138 aa10□□□□□ -0.81
SQSTM1-214ENST00000512234 hDV102S1A0JD36 115 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 GCSHP23434 173 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 MRPS36P82909 103 aaKnown RBP9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 LINC00173Q6ZV60 143 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 TOMM6Q96B49 74 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 KRTAP17-1Q9BYP8 105 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 PYGO1Q9Y3Y4 419 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 A0A096LNJ9 63 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 LINC01546A6NGU7 62 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 COX6A2Q02221 97 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 SMAGPQ0VAQ4 97 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 TMEM141Q96I45 108 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 FAM30AQ9NZY2 134 aa9.99□□□□□ -0.81
SQSTM1-214ENST00000512234 LINC00614P0C842 121 aa9.98□□□□□ -0.81
SQSTM1-214ENST00000512234 DDTP30046 118 aa9.98□□□□□ -0.81
SQSTM1-214ENST00000512234 CD164L2Q6UWJ8 174 aa9.98□□□□□ -0.81
SQSTM1-214ENST00000512234 SCGB3A1Q96QR1 104 aa9.98□□□□□ -0.81
SQSTM1-214ENST00000512234 HERC2O95714 4834 aa9.97□□□□□ -0.81
SQSTM1-214ENST00000512234 K7EMI3 77 aa9.97□□□□□ -0.81
SQSTM1-214ENST00000512234 HSPG2P98160 4391 aa9.96□□□□□ -0.81
SQSTM1-214ENST00000512234 CDPF1Q6NVV7 123 aa9.96□□□□□ -0.81
SQSTM1-214ENST00000512234 AP5S1Q9NUS5 200 aa9.96□□□□□ -0.81
SQSTM1-214ENST00000512234 VCX2Q9H322 139 aa9.96□□□□□ -0.82
SQSTM1-214ENST00000512234 LINC00242Q5T6M2 205 aa9.95□□□□□ -0.82
SQSTM1-214ENST00000512234 TEX43Q6ZNM6 134 aa9.95□□□□□ -0.82
SQSTM1-214ENST00000512234 AMELXQ99217 191 aa9.95□□□□□ -0.82
SQSTM1-214ENST00000512234 DNAH8Q96JB1 4490 aa9.95□□□□□ -0.82
SQSTM1-214ENST00000512234 COX7A2LO14548 114 aa9.94□□□□□ -0.82
SQSTM1-214ENST00000512234 UBE2D1P51668 147 aa9.94□□□□□ -0.82
SQSTM1-214ENST00000512234 C14orf177Q52M58 125 aa9.94□□□□□ -0.82
SQSTM1-214ENST00000512234 ERASQ7Z444 233 aa9.93□□□□□ -0.82
SQSTM1-214ENST00000512234 C14orf144Q96I85 54 aa9.93□□□□□ -0.82
SQSTM1-214ENST00000512234 NUPR1O60356 82 aa9.93□□□□□ -0.82
SQSTM1-214ENST00000512234 MALP21145 153 aa9.93□□□□□ -0.82
SQSTM1-214ENST00000512234 XGP55808 180 aa9.93□□□□□ -0.82
SQSTM1-214ENST00000512234 Q6ZN92 141 aa9.93□□□□□ -0.82
SQSTM1-214ENST00000512234 FAM19A2Q8N3H0 131 aa9.93□□□□□ -0.82
SQSTM1-214ENST00000512234 TIMM17AQ99595 171 aa9.93□□□□□ -0.82
SQSTM1-214ENST00000512234 IGHV3OR16-9A0A0B4J2B5 98 aa9.92□□□□□ -0.82
SQSTM1-214ENST00000512234 A0A0J9YXV3 536 aa9.92□□□□□ -0.82
SQSTM1-214ENST00000512234 LINC00310P59036 64 aa9.92□□□□□ -0.82
SQSTM1-214ENST00000512234 BAGE3Q86Y29 109 aa9.92□□□□□ -0.82
SQSTM1-214ENST00000512234 GVQW2A0A096LPI5 108 aaPredicted RBP9.9□□□□□ -0.82
SQSTM1-214ENST00000512234 IGHV1-58A0A0C4DH39 117 aa9.9□□□□□ -0.82
SQSTM1-214ENST00000512234 CFAP161Q6P656 301 aa9.9□□□□□ -0.82
SQSTM1-214ENST00000512234 C2orf88Q9BSF0 95 aa9.9□□□□□ -0.82
SQSTM1-214ENST00000512234 IGLV4-69A0A075B6H9 119 aa9.9□□□□□ -0.83
SQSTM1-214ENST00000512234 PANO1I0J062 215 aa9.9□□□□□ -0.83
SQSTM1-214ENST00000512234 SERF1AO75920 110 aa9.9□□□□□ -0.83
SQSTM1-214ENST00000512234 HBDP02042 147 aa9.9□□□□□ -0.83
SQSTM1-214ENST00000512234 G0S2P27469 103 aa9.89□□□□□ -0.83
SQSTM1-214ENST00000512234 C9orf163Q8N9P6 203 aa9.89□□□□□ -0.83
SQSTM1-214ENST00000512234 CST9LQ9H4G1 147 aa9.89□□□□□ -0.83
SQSTM1-214ENST00000512234 SMR3BP02814 79 aaPredicted RBP9.88□□□□□ -0.83
SQSTM1-214ENST00000512234 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 CNBPP62633 177 aaKnown RBP9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 ORAOV1Q8WV07 137 aa9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 PRO1933Q9H354 126 aa9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 FAT1Q14517 4588 aa9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 ZNF561-AS1K7EIQ3 104 aa9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 SCGB1D1O95968 90 aa9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 CHTF8P0CG12 524 aa9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 CHCHD1Q96BP2 118 aaKnown RBP9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 KRTAP4-5Q9BYR2 181 aa9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.87□□□□□ -0.83
SQSTM1-214ENST00000512234 SPAG11BQ08648 103 aa9.86□□□□□ -0.83
SQSTM1-214ENST00000512234 IGHV3-64A0A075B6Q5 118 aa9.85□□□□□ -0.83
SQSTM1-214ENST00000512234 A0A087WZ39 114 aa9.85□□□□□ -0.83
SQSTM1-214ENST00000512234 HSBP1O75506 76 aa9.85□□□□□ -0.83
SQSTM1-214ENST00000512234 NPSP0C0P6 89 aa9.85□□□□□ -0.83
SQSTM1-214ENST00000512234 PMVKQ15126 192 aa9.85□□□□□ -0.83
SQSTM1-214ENST00000512234 Q6ZRU5 148 aa9.85□□□□□ -0.83
SQSTM1-214ENST00000512234 PAPPA-AS1Q5QFB9 102 aa9.85□□□□□ -0.83
SQSTM1-214ENST00000512234 C10orf25Q5T742 122 aa9.85□□□□□ -0.83
SQSTM1-214ENST00000512234 Q6ZSA8 131 aa9.84□□□□□ -0.83
SQSTM1-214ENST00000512234 GEMIN7Q9H840 131 aaKnown RBP9.84□□□□□ -0.83
SQSTM1-214ENST00000512234 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.83□□□□□ -0.84
SQSTM1-214ENST00000512234 SYCNQ0VAF6 134 aa9.83□□□□□ -0.84
SQSTM1-214ENST00000512234 C2orf82Q6UX34 121 aa9.83□□□□□ -0.84
SQSTM1-214ENST00000512234 SCXQ7RTU7 201 aa9.83□□□□□ -0.84
SQSTM1-214ENST00000512234 FAM19A3Q7Z5A8 133 aa9.83□□□□□ -0.84
SQSTM1-214ENST00000512234 CAMK2N2Q96S95 79 aa9.83□□□□□ -0.84
SQSTM1-214ENST00000512234 TOMM7Q9P0U1 55 aa9.83□□□□□ -0.84
SQSTM1-214ENST00000512234 H0Y8G0 127 aa9.82□□□□□ -0.84
SQSTM1-214ENST00000512234 APOMO95445 188 aa9.82□□□□□ -0.84
SQSTM1-214ENST00000512234 KIAA0087Q14695 138 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms