RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 HSPB8Q9UJY1 196 aa12.99□□□□□ -0.33
SMAD1-211ENST00000512019 GAGE12HA6NDE8 117 aa12.98□□□□□ -0.33
SMAD1-211ENST00000512019 CDK2AP2O75956 126 aa12.98□□□□□ -0.33
SMAD1-211ENST00000512019 S100A6P06703 90 aa12.98□□□□□ -0.33
SMAD1-211ENST00000512019 UBE2D1P51668 147 aa12.98□□□□□ -0.33
SMAD1-211ENST00000512019 MAPKAPK5-AS1Q8N8E1 139 aa12.98□□□□□ -0.33
SMAD1-211ENST00000512019 IFI27L1Q96BM0 104 aa12.98□□□□□ -0.33
SMAD1-211ENST00000512019 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
SMAD1-211ENST00000512019 KRTAP26-1Q6PEX3 210 aa12.97□□□□□ -0.33
SMAD1-211ENST00000512019 CD164L2Q6UWJ8 174 aa12.97□□□□□ -0.33
SMAD1-211ENST00000512019 CST9LQ9H4G1 147 aa12.97□□□□□ -0.33
SMAD1-211ENST00000512019 SEC11AP67812 179 aa12.96□□□□□ -0.33
SMAD1-211ENST00000512019 PACRGQ96M98 296 aaPredicted RBP12.96□□□□□ -0.33
SMAD1-211ENST00000512019 PRSS1P07477 247 aa12.95□□□□□ -0.34
SMAD1-211ENST00000512019 FABP4P15090 132 aa12.95□□□□□ -0.34
SMAD1-211ENST00000512019 FOXI1Q12951 378 aa12.95□□□□□ -0.34
SMAD1-211ENST00000512019 SPATA12Q7Z6I5 190 aa12.95□□□□□ -0.34
SMAD1-211ENST00000512019 LINC00242Q5T6M2 205 aa12.94□□□□□ -0.34
SMAD1-211ENST00000512019 FAM19A3Q7Z5A8 133 aa12.94□□□□□ -0.34
SMAD1-211ENST00000512019 EREGO14944 169 aa12.93□□□□□ -0.34
SMAD1-211ENST00000512019 A0A087WTM6 91 aa12.92□□□□□ -0.34
SMAD1-211ENST00000512019 TRAV12-1A0A0B4J245 112 aa12.92□□□□□ -0.34
SMAD1-211ENST00000512019 COX7A2LO14548 114 aa12.92□□□□□ -0.34
SMAD1-211ENST00000512019 GEMIN7Q9H840 131 aaKnown RBP12.92□□□□□ -0.34
SMAD1-211ENST00000512019 LRCOL1A6NCL2 159 aa12.91□□□□□ -0.34
SMAD1-211ENST00000512019 KRTAP10-2P60368 255 aa12.91□□□□□ -0.34
SMAD1-211ENST00000512019 HERVK_113P63121 156 aa12.91□□□□□ -0.34
SMAD1-211ENST00000512019 MAP1LC3CQ9BXW4 147 aa12.91□□□□□ -0.34
SMAD1-211ENST00000512019 IGHV3OR16-9A0A0B4J2B5 98 aa12.9□□□□□ -0.34
SMAD1-211ENST00000512019 A0A0J9YXV3 536 aa12.9□□□□□ -0.34
SMAD1-211ENST00000512019 TINCRA0A1B0GVN0 87 aa12.9□□□□□ -0.34
SMAD1-211ENST00000512019 MALP21145 153 aa12.9□□□□□ -0.34
SMAD1-211ENST00000512019 C14orf177Q52M58 125 aa12.9□□□□□ -0.34
SMAD1-211ENST00000512019 CFAP161Q6P656 301 aa12.9□□□□□ -0.34
SMAD1-211ENST00000512019 USP17L23D6RBM5 183 aa12.89□□□□□ -0.35
SMAD1-211ENST00000512019 H0Y8G0 127 aa12.89□□□□□ -0.35
SMAD1-211ENST00000512019 LECT2O14960 151 aa12.89□□□□□ -0.35
SMAD1-211ENST00000512019 S100A2P29034 98 aa12.89□□□□□ -0.35
SMAD1-211ENST00000512019 Q8N1X5 172 aa12.89□□□□□ -0.35
SMAD1-211ENST00000512019 COX6A2Q02221 97 aa12.88□□□□□ -0.35
SMAD1-211ENST00000512019 C5orf38Q86SI9 138 aa12.88□□□□□ -0.35
SMAD1-211ENST00000512019 HIST3H2BBQ8N257 126 aa12.88□□□□□ -0.35
SMAD1-211ENST00000512019 CHTOPQ9Y3Y2 248 aaKnown RBP12.88□□□□□ -0.35
SMAD1-211ENST00000512019 IGHV1-58A0A0C4DH39 117 aa12.87□□□□□ -0.35
SMAD1-211ENST00000512019 APOMO95445 188 aa12.87□□□□□ -0.35
SMAD1-211ENST00000512019 IGLC3P0DOY3 106 aa12.87□□□□□ -0.35
SMAD1-211ENST00000512019 WFDC2Q14508 124 aa12.87□□□□□ -0.35
SMAD1-211ENST00000512019 CHAC1Q9BUX1 264 aa12.87□□□□□ -0.35
SMAD1-211ENST00000512019 A0A087WZ39 114 aa12.86□□□□□ -0.35
SMAD1-211ENST00000512019 SNRPEP62304 92 aaKnown RBP12.86□□□□□ -0.35
SMAD1-211ENST00000512019 LINC00469Q8N7U9 141 aa12.86□□□□□ -0.35
SMAD1-211ENST00000512019 Q8N814 137 aa12.86□□□□□ -0.35
SMAD1-211ENST00000512019 IGLV4-69A0A075B6H9 119 aa12.85□□□□□ -0.35
SMAD1-211ENST00000512019 F8VRH5 84 aa12.85□□□□□ -0.35
SMAD1-211ENST00000512019 LINC01561Q8N1V8 128 aa12.85□□□□□ -0.35
SMAD1-211ENST00000512019 C15orf56Q8N910 161 aa12.85□□□□□ -0.35
SMAD1-211ENST00000512019 IGLV5-45A0A087WSX0 123 aa12.84□□□□□ -0.35
SMAD1-211ENST00000512019 C5orf52A6NGY3 159 aa12.84□□□□□ -0.35
SMAD1-211ENST00000512019 ODF1Q14990 250 aa12.84□□□□□ -0.35
SMAD1-211ENST00000512019 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
SMAD1-211ENST00000512019 CDKN2A-AS1Q9UH64 79 aa12.84□□□□□ -0.35
SMAD1-211ENST00000512019 hDV102S1A0JD36 115 aa12.83□□□□□ -0.36
SMAD1-211ENST00000512019 H3BRM9 83 aa12.83□□□□□ -0.36
SMAD1-211ENST00000512019 SYS1-DBNDD2H3BUS1 97 aa12.83□□□□□ -0.36
SMAD1-211ENST00000512019 HIST1H2BLQ99880 126 aa12.83□□□□□ -0.36
SMAD1-211ENST00000512019 TMA7Q9Y2S6 64 aaKnown RBP12.83□□□□□ -0.36
SMAD1-211ENST00000512019 GVQW2A0A096LPI5 108 aaPredicted RBP12.82□□□□□ -0.36
SMAD1-211ENST00000512019 C11orf86A6NJI1 115 aa12.82□□□□□ -0.36
SMAD1-211ENST00000512019 FUSP35637 526 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMAD1-211ENST00000512019 PLNP26678 52 aa12.81□□□□□ -0.36
SMAD1-211ENST00000512019 KRTDAPP60985 99 aa12.81□□□□□ -0.36
SMAD1-211ENST00000512019 OR10D4PQ8NGN7 298 aa12.81□□□□□ -0.36
SMAD1-211ENST00000512019 NTN5Q8WTR8 489 aaPredicted RBP12.81□□□□□ -0.36
SMAD1-211ENST00000512019 ORAOV1Q8WV07 137 aa12.81□□□□□ -0.36
SMAD1-211ENST00000512019 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
SMAD1-211ENST00000512019 C3orf79P0CE67 100 aa12.8□□□□□ -0.36
SMAD1-211ENST00000512019 ZNF22P17026 224 aaPredicted RBP12.8□□□□□ -0.36
SMAD1-211ENST00000512019 HIGD2BQ4VC39 106 aa12.8□□□□□ -0.36
SMAD1-211ENST00000512019 PET117Q6UWS5 81 aa12.8□□□□□ -0.36
SMAD1-211ENST00000512019 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.79□□□□□ -0.36
SMAD1-211ENST00000512019 ZNF561-AS1K7EIQ3 104 aa12.79□□□□□ -0.36
SMAD1-211ENST00000512019 TMEM170BQ5T4T1 132 aa12.79□□□□□ -0.36
SMAD1-211ENST00000512019 DPM2O94777 84 aa12.78□□□□□ -0.36
SMAD1-211ENST00000512019 SPAG11BQ08648 103 aa12.78□□□□□ -0.36
SMAD1-211ENST00000512019 C20orf202A1L168 122 aa12.77□□□□□ -0.37
SMAD1-211ENST00000512019 CDPF1Q6NVV7 123 aa12.77□□□□□ -0.37
SMAD1-211ENST00000512019 PMCHL2Q9BQD1 86 aa12.77□□□□□ -0.37
SMAD1-211ENST00000512019 PGPEP1Q9NXJ5 209 aa12.77□□□□□ -0.37
SMAD1-211ENST00000512019 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
SMAD1-211ENST00000512019 IGKCP01834 107 aa12.76□□□□□ -0.37
SMAD1-211ENST00000512019 SPINK8P0C7L1 97 aa12.76□□□□□ -0.37
SMAD1-211ENST00000512019 LINC01545Q5VT33 79 aa12.76□□□□□ -0.37
SMAD1-211ENST00000512019 IGLV5-52A0A0A0MRZ9 124 aa12.75□□□□□ -0.37
SMAD1-211ENST00000512019 PRSS2P07478 247 aa12.75□□□□□ -0.37
SMAD1-211ENST00000512019 HERC1Q15751 4861 aa12.74□□□□□ -0.37
SMAD1-211ENST00000512019 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.74□□□□□ -0.37
SMAD1-211ENST00000512019 CNBPP62633 177 aaKnown RBP12.74□□□□□ -0.37
SMAD1-211ENST00000512019 C2orf48Q96LS8 159 aa12.74□□□□□ -0.37
SMAD1-211ENST00000512019 FAT1Q14517 4588 aa12.73□□□□□ -0.37
SMAD1-211ENST00000512019 F8WDY8 70 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms