RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.39□□□□□ -1.07
COL6A6-203ENST00000511332 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
COL6A6-203ENST00000511332 SEC11AP67812 179 aa8.39□□□□□ -1.07
COL6A6-203ENST00000511332 IGHV3OR16-9A0A0B4J2B5 98 aa8.38□□□□□ -1.07
COL6A6-203ENST00000511332 HSBP1O75506 76 aa8.38□□□□□ -1.07
COL6A6-203ENST00000511332 PMCHL1Q16048 86 aa8.38□□□□□ -1.07
COL6A6-203ENST00000511332 HIGD2BQ4VC39 106 aa8.38□□□□□ -1.07
COL6A6-203ENST00000511332 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
COL6A6-203ENST00000511332 FAM19A3Q7Z5A8 133 aa8.38□□□□□ -1.07
COL6A6-203ENST00000511332 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
COL6A6-203ENST00000511332 ATP5LO75964 103 aa8.37□□□□□ -1.07
COL6A6-203ENST00000511332 HERVK_113P63121 156 aa8.37□□□□□ -1.07
COL6A6-203ENST00000511332 PMVKQ15126 192 aa8.37□□□□□ -1.07
COL6A6-203ENST00000511332 PDZD11Q5EBL8 140 aa8.37□□□□□ -1.07
COL6A6-203ENST00000511332 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
COL6A6-203ENST00000511332 C5orf38Q86SI9 138 aa8.37□□□□□ -1.07
COL6A6-203ENST00000511332 ZNF561-AS1K7EIQ3 104 aa8.36□□□□□ -1.07
COL6A6-203ENST00000511332 KRTAP10-1P60331 282 aa8.36□□□□□ -1.07
COL6A6-203ENST00000511332 OR10D4PQ8NGN7 298 aa8.36□□□□□ -1.07
COL6A6-203ENST00000511332 GEMIN7Q9H840 131 aaKnown RBP8.36□□□□□ -1.07
COL6A6-203ENST00000511332 A0A087WZ39 114 aa8.35□□□□□ -1.07
COL6A6-203ENST00000511332 SERF1AO75920 110 aa8.35□□□□□ -1.07
COL6A6-203ENST00000511332 C9orf163Q8N9P6 203 aa8.35□□□□□ -1.07
COL6A6-203ENST00000511332 CST9LQ9H4G1 147 aa8.35□□□□□ -1.07
COL6A6-203ENST00000511332 IGHV3-64A0A075B6Q5 118 aa8.34□□□□□ -1.07
COL6A6-203ENST00000511332 SPAG11BQ08648 103 aa8.34□□□□□ -1.07
COL6A6-203ENST00000511332 LINC01561Q8N1V8 128 aa8.34□□□□□ -1.07
COL6A6-203ENST00000511332 ORAOV1Q8WV07 137 aa8.34□□□□□ -1.07
COL6A6-203ENST00000511332 PKIGQ9Y2B9 76 aa8.34□□□□□ -1.07
COL6A6-203ENST00000511332 DNAH5Q8TE73 4624 aa8.34□□□□□ -1.07
COL6A6-203ENST00000511332 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 COX6A2Q02221 97 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 LINC01620Q4KN68 170 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 CARD19Q96LW7 228 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST1H2BNQ99877 126 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 HIST1H2BMQ99879 126 aa8.33□□□□□ -1.08
COL6A6-203ENST00000511332 IGLV4-69A0A075B6H9 119 aa8.32□□□□□ -1.08
COL6A6-203ENST00000511332 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
COL6A6-203ENST00000511332 NDUFA6P56556 154 aa8.32□□□□□ -1.08
COL6A6-203ENST00000511332 LINC00310P59036 64 aa8.32□□□□□ -1.08
COL6A6-203ENST00000511332 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
COL6A6-203ENST00000511332 LINC00469Q8N7U9 141 aa8.32□□□□□ -1.08
COL6A6-203ENST00000511332 C2orf48Q96LS8 159 aa8.32□□□□□ -1.08
COL6A6-203ENST00000511332 PACRGQ96M98 296 aaPredicted RBP8.32□□□□□ -1.08
COL6A6-203ENST00000511332 F8WDY8 70 aa8.31□□□□□ -1.08
COL6A6-203ENST00000511332 SLPIP03973 132 aa8.31□□□□□ -1.08
COL6A6-203ENST00000511332 SYCNQ0VAF6 134 aa8.31□□□□□ -1.08
COL6A6-203ENST00000511332 Q6ZSA8 131 aa8.31□□□□□ -1.08
COL6A6-203ENST00000511332 IFI27L1Q96BM0 104 aa8.31□□□□□ -1.08
COL6A6-203ENST00000511332 LINC00526Q96FQ7 95 aa8.31□□□□□ -1.08
COL6A6-203ENST00000511332 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
COL6A6-203ENST00000511332 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
COL6A6-203ENST00000511332 DYNC1H1Q14204 4646 aaKnown RBP8.3□□□□□ -1.08
COL6A6-203ENST00000511332 IGLV5-45A0A087WSX0 123 aa8.3□□□□□ -1.08
COL6A6-203ENST00000511332 LEPROTL1O95214 131 aa8.3□□□□□ -1.08
COL6A6-203ENST00000511332 IGLC3P0DOY3 106 aa8.3□□□□□ -1.08
COL6A6-203ENST00000511332 CHAC1Q9BUX1 264 aa8.3□□□□□ -1.08
COL6A6-203ENST00000511332 TRAV12-1A0A0B4J245 112 aa8.29□□□□□ -1.08
COL6A6-203ENST00000511332 H3BRM9 83 aa8.29□□□□□ -1.08
COL6A6-203ENST00000511332 NDUFA1O15239 70 aa8.29□□□□□ -1.08
COL6A6-203ENST00000511332 HSPB8Q9UJY1 196 aa8.29□□□□□ -1.08
COL6A6-203ENST00000511332 PRSS2P07478 247 aa8.28□□□□□ -1.08
COL6A6-203ENST00000511332 SDIM1Q6ZPB5 146 aa8.28□□□□□ -1.08
COL6A6-203ENST00000511332 Q8IZM0 81 aa8.28□□□□□ -1.08
COL6A6-203ENST00000511332 LRP1BQ9NZR2 4599 aa8.28□□□□□ -1.08
COL6A6-203ENST00000511332 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
COL6A6-203ENST00000511332 Q6ZRU5 148 aa8.27□□□□□ -1.09
COL6A6-203ENST00000511332 FAM30AQ9NZY2 134 aa8.27□□□□□ -1.09
COL6A6-203ENST00000511332 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
COL6A6-203ENST00000511332 NUPR1O60356 82 aa8.26□□□□□ -1.09
COL6A6-203ENST00000511332 XGP55808 180 aa8.26□□□□□ -1.09
COL6A6-203ENST00000511332 KIAA0087Q14695 138 aa8.26□□□□□ -1.09
COL6A6-203ENST00000511332 RNF151Q2KHN1 245 aa8.26□□□□□ -1.09
COL6A6-203ENST00000511332 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
COL6A6-203ENST00000511332 TOMM7Q9P0U1 55 aa8.26□□□□□ -1.09
COL6A6-203ENST00000511332 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
COL6A6-203ENST00000511332 F8VRH5 84 aa8.25□□□□□ -1.09
COL6A6-203ENST00000511332 CXCL5P42830 114 aa8.25□□□□□ -1.09
COL6A6-203ENST00000511332 CKS1BP61024 79 aa8.25□□□□□ -1.09
COL6A6-203ENST00000511332 COA6Q5JTJ3 125 aaKnown RBP8.25□□□□□ -1.09
COL6A6-203ENST00000511332 LINC00474Q9P2X8 69 aa8.25□□□□□ -1.09
COL6A6-203ENST00000511332 KIAA1109Q2LD37 5005 aa8.24□□□□□ -1.09
COL6A6-203ENST00000511332 TRBV30A0A0K0K1B3 111 aa8.24□□□□□ -1.09
COL6A6-203ENST00000511332 C11orf86A6NJI1 115 aa8.24□□□□□ -1.09
COL6A6-203ENST00000511332 H0Y8G0 127 aa8.24□□□□□ -1.09
COL6A6-203ENST00000511332 SPINK8P0C7L1 97 aa8.24□□□□□ -1.09
COL6A6-203ENST00000511332 FABP4P15090 132 aa8.24□□□□□ -1.09
COL6A6-203ENST00000511332 ZNF22P17026 224 aaPredicted RBP8.24□□□□□ -1.09
COL6A6-203ENST00000511332 CIRBPQ14011 172 aaKnown RBP8.24□□□□□ -1.09
COL6A6-203ENST00000511332 C6orf226Q5I0X4 101 aa8.24□□□□□ -1.09
COL6A6-203ENST00000511332 TMEM170BQ5T4T1 132 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms