RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ESDP10768 282 aa5.5□□□□□ -1.53
PDPN-209ENST00000510906 POLR2KP53803 58 aaKnown RBP5.5□□□□□ -1.53
PDPN-209ENST00000510906 CNBPP62633 177 aaKnown RBP5.5□□□□□ -1.53
PDPN-209ENST00000510906 RIGQ13278 110 aa5.5□□□□□ -1.53
PDPN-209ENST00000510906 CHCHD10Q8WYQ3 142 aaPredicted RBP5.5□□□□□ -1.53
PDPN-209ENST00000510906 MRAP2Q96G30 205 aa5.5□□□□□ -1.53
PDPN-209ENST00000510906 SMCO4Q9NRQ5 59 aa5.5□□□□□ -1.53
PDPN-209ENST00000510906 NAT8BQ9UHF3 227 aa5.5□□□□□ -1.53
PDPN-209ENST00000510906 ZNF25P17030 456 aaPredicted RBP5.49□□□□□ -1.53
PDPN-209ENST00000510906 HIGD2BQ4VC39 106 aa5.49□□□□□ -1.53
PDPN-209ENST00000510906 BTF3L4Q96K17 158 aa5.49□□□□□ -1.53
PDPN-209ENST00000510906 TRBV27A0A0K0K1C4 114 aa5.48□□□□□ -1.53
PDPN-209ENST00000510906 SMIM27A0A1W2PRY6 76 aa5.48□□□□□ -1.53
PDPN-209ENST00000510906 CHTF8P0CG12 524 aa5.48□□□□□ -1.53
PDPN-209ENST00000510906 MRPL51Q4U2R6 128 aaKnown RBP5.48□□□□□ -1.53
PDPN-209ENST00000510906 PET117Q6UWS5 81 aa5.48□□□□□ -1.53
PDPN-209ENST00000510906 OR5A1Q8NGJ0 315 aa5.48□□□□□ -1.53
PDPN-209ENST00000510906 TMEM101Q96IK0 257 aa5.48□□□□□ -1.53
PDPN-209ENST00000510906 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
PDPN-209ENST00000510906 IGHV3-64A0A075B6Q5 118 aa5.47□□□□□ -1.53
PDPN-209ENST00000510906 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.47□□□□□ -1.53
PDPN-209ENST00000510906 LINC00959A0A1B0GUT2 108 aa5.47□□□□□ -1.53
PDPN-209ENST00000510906 LOC105371267A0A1B0GV96 52 aa5.47□□□□□ -1.53
PDPN-209ENST00000510906 C7orf77A4D0Y5 90 aa5.47□□□□□ -1.53
PDPN-209ENST00000510906 CCL25O15444 150 aa5.47□□□□□ -1.53
PDPN-209ENST00000510906 XCL1P47992 114 aa5.47□□□□□ -1.53
PDPN-209ENST00000510906 RPL37AP61513 92 aaKnown RBP5.47□□□□□ -1.53
PDPN-209ENST00000510906 CIRBPQ14011 172 aaKnown RBP5.47□□□□□ -1.53
PDPN-209ENST00000510906 FAM104BQ5XKR9 115 aa5.47□□□□□ -1.53
PDPN-209ENST00000510906 MRPL52Q86TS9 123 aaKnown RBP5.47□□□□□ -1.53
PDPN-209ENST00000510906 RPS10P5Q9NQ39 176 aa5.47□□□□□ -1.53
PDPN-209ENST00000510906 CDC42SE2Q9NRR3 84 aa5.47□□□□□ -1.53
PDPN-209ENST00000510906 LRP1Q07954 4544 aaKnown RBP5.46□□□□□ -1.53
PDPN-209ENST00000510906 GVQW2A0A096LPI5 108 aaPredicted RBP5.46□□□□□ -1.54
PDPN-209ENST00000510906 KRTAP29-1A8MX34 341 aaPredicted RBP5.46□□□□□ -1.54
PDPN-209ENST00000510906 MT-ND4LP03901 98 aa5.46□□□□□ -1.54
PDPN-209ENST00000510906 FCER1GP30273 86 aa5.46□□□□□ -1.54
PDPN-209ENST00000510906 HNRNPA3P51991 378 aaKnown RBP5.46□□□□□ -1.54
PDPN-209ENST00000510906 MRPL54Q6P161 138 aaKnown RBP5.46□□□□□ -1.54
PDPN-209ENST00000510906 CBLN2Q8IUK8 224 aa5.46□□□□□ -1.54
PDPN-209ENST00000510906 ZNF664Q8N3J9 261 aa5.46□□□□□ -1.54
PDPN-209ENST00000510906 LRP2P98164 4655 aa5.45□□□□□ -1.54
PDPN-209ENST00000510906 FAT3Q8TDW7 4589 aa5.45□□□□□ -1.54
PDPN-209ENST00000510906 A0A087WYN8 130 aa5.45□□□□□ -1.54
PDPN-209ENST00000510906 PPP1R17O96001 155 aa5.45□□□□□ -1.54
PDPN-209ENST00000510906 IGKV2-30P06310 120 aa5.45□□□□□ -1.54
PDPN-209ENST00000510906 COX6A2Q02221 97 aa5.45□□□□□ -1.54
PDPN-209ENST00000510906 RNASE13Q5GAN3 156 aaKnown RBP5.45□□□□□ -1.54
PDPN-209ENST00000510906 SPACA4Q8TDM5 124 aa5.45□□□□□ -1.54
PDPN-209ENST00000510906 LINC00526Q96FQ7 95 aa5.45□□□□□ -1.54
PDPN-209ENST00000510906 KIR2DL4Q99706 377 aa5.45□□□□□ -1.54
PDPN-209ENST00000510906 A0A1B0GW15 77 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 A0A1B0GXF2 115 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 COLCA2A8K830 154 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 PPP1R2P9O14990 202 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 CKS2P33552 79 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 RAB5BP61020 215 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 HBBP68871 147 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 SS18Q15532 418 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 Q6ZUT4 128 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 DPH3Q96FX2 82 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 C20orf78Q9BR46 151 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 UBE2D4Q9Y2X8 147 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 PKHD1L1Q86WI1 4243 aa5.44□□□□□ -1.54
PDPN-209ENST00000510906 TRBV24-1A0A075B6N3 115 aa5.43□□□□□ -1.54
PDPN-209ENST00000510906 IGHV1-58A0A0C4DH39 117 aa5.43□□□□□ -1.54
PDPN-209ENST00000510906 IGKV2-24A0A0C4DH68 120 aa5.43□□□□□ -1.54
PDPN-209ENST00000510906 C1orf196B1AJZ1 125 aa5.43□□□□□ -1.54
PDPN-209ENST00000510906 D6R8Y8 96 aa5.43□□□□□ -1.54
PDPN-209ENST00000510906 NPYP01303 97 aa5.43□□□□□ -1.54
PDPN-209ENST00000510906 S100A8P05109 93 aa5.43□□□□□ -1.54
PDPN-209ENST00000510906 CD164L2Q6UWJ8 174 aa5.43□□□□□ -1.54
PDPN-209ENST00000510906 PLAC8Q9NZF1 115 aa5.43□□□□□ -1.54
PDPN-209ENST00000510906 CSDC2Q9Y534 153 aaKnown RBP5.43□□□□□ -1.54
PDPN-209ENST00000510906 A0A096LNI7 61 aa5.42□□□□□ -1.54
PDPN-209ENST00000510906 TRAV13-1A0A0B4J241 112 aa5.42□□□□□ -1.54
PDPN-209ENST00000510906 RPL39P62891 51 aaKnown RBP5.42□□□□□ -1.54
PDPN-209ENST00000510906 RPL32P62910 135 aaKnown RBP5.42□□□□□ -1.54
PDPN-209ENST00000510906 MAJINQ3KP22 176 aa5.42□□□□□ -1.54
PDPN-209ENST00000510906 SMIM2Q9BVW6 85 aa5.42□□□□□ -1.54
PDPN-209ENST00000510906 FSIP2Q5CZC0 6907 aa5.42□□□□□ -1.54
PDPN-209ENST00000510906 TCAPO15273 167 aa5.41□□□□□ -1.54
PDPN-209ENST00000510906 OXTP01178 125 aa5.41□□□□□ -1.54
PDPN-209ENST00000510906 RAB5AP20339 215 aa5.41□□□□□ -1.54
PDPN-209ENST00000510906 RPL24P83731 157 aaKnown RBP5.41□□□□□ -1.54
PDPN-209ENST00000510906 SMAGPQ0VAQ4 97 aa5.41□□□□□ -1.54
PDPN-209ENST00000510906 FAM104AQ969W3 186 aa5.41□□□□□ -1.54
PDPN-209ENST00000510906 CARD19Q96LW7 228 aa5.41□□□□□ -1.54
PDPN-209ENST00000510906 OPRPNQ99935 248 aaPredicted RBP5.41□□□□□ -1.54
PDPN-209ENST00000510906 TIMM21Q9BVV7 248 aa5.41□□□□□ -1.54
PDPN-209ENST00000510906 IGLV4-69A0A075B6H9 119 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 COX7A2LO14548 114 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 PHOX2AO14813 284 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 PPBPP02775 128 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 S100PP25815 95 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 SYCNQ0VAF6 134 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 TMEM136Q6ZRR5 245 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 ATP5L2Q7Z4Y8 100 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 C5orf38Q86SI9 138 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 ORMDL3Q8N138 153 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms