RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 CSDC2Q9Y534 153 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-206ENST00000509857 ACANP16112 2415 aa4.64□□□□□ -1.67
TRAPPC11-206ENST00000509857 IGLV4-69A0A075B6H9 119 aa4.63□□□□□ -1.67
TRAPPC11-206ENST00000509857 IGLV8-61A0A075B6I0 122 aa4.63□□□□□ -1.67
TRAPPC11-206ENST00000509857 IGKV2D-26A0A0A0MRZ7 120 aa4.63□□□□□ -1.67
TRAPPC11-206ENST00000509857 COTL1Q14019 142 aa4.63□□□□□ -1.67
TRAPPC11-206ENST00000509857 DAZ4Q86SG3 579 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-206ENST00000509857 CHAC1Q9BUX1 264 aa4.63□□□□□ -1.67
TRAPPC11-206ENST00000509857 DAZ3Q9NR90 486 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-206ENST00000509857 SPANXB1Q9NS25 103 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-206ENST00000509857 TP73-AS1Q9UF72 201 aa4.63□□□□□ -1.67
TRAPPC11-206ENST00000509857 PDZD2O15018 2839 aa4.63□□□□□ -1.67
TRAPPC11-206ENST00000509857 ZFHX3Q15911 3703 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 MAP1AP78559 2803 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 MTORP42345 2549 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 A0A1B0GWB2 263 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 SMIM9A6NGZ8 99 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 P0DMU3 169 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 FAM231AP0DMU4 169 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 FAM231CP0DMU5 169 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 FAM19A3Q7Z5A8 133 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 CEND1Q8N111 149 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 PLEKHB2Q96CS7 222 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 GTSF1LQ9H1H1 148 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 VCX2Q9H322 139 aa4.62□□□□□ -1.67
TRAPPC11-206ENST00000509857 TRBV7-3A0A075B6L6 115 aa4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 TRBV6-4A0A1B0GX49 114 aa4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 LEPROTO15243 131 aa4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 SMIM13P0DJ93 91 aa4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 RPL39P62891 51 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 GTF2H5Q6ZYL4 71 aa4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 OR4C5Q8NGB2 326 aa4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 OR5A1Q8NGJ0 315 aa4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 KIR2DL5BQ8NHK3 375 aa4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 PRADC1Q9BSG0 188 aa4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 XCL2Q9UBD3 114 aa4.61□□□□□ -1.67
TRAPPC11-206ENST00000509857 TRAV8-6A0A0B4J262 113 aa4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 TINCRA0A1B0GVN0 87 aa4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 TMEM223A0PJW6 202 aa4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 F8WDY8 70 aa4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 VAMP3Q15836 100 aa4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 PRR4Q16378 134 aa4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 RRN3P1Q2M238 152 aa4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 Q6ZVH6 145 aa4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 NEGR1Q7Z3B1 354 aa4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 CHCHD7Q9BUK0 85 aa4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 ZNF469Q96JG9 3925 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-206ENST00000509857 ITPR2Q14571 2701 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 TRGV1A0A0A0MS02 117 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 ZNF815PA8K554 130 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 H0Y9J4 135 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 J3QQQ9 107 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 K7EP13 123 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 HTN1P15515 57 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 ZNF22P17026 224 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 UBE2D3P61077 147 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 UBE2D2P62837 147 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 TMEM170BQ5T4T1 132 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 ZNRF2Q8NHG8 242 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 HIST1H4GQ99525 98 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 CITED1Q99966 193 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 PPDPFQ9H3Y8 114 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 MRPL16Q9NX20 251 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 UBE2D4Q9Y2X8 147 aa4.59□□□□□ -1.67
TRAPPC11-206ENST00000509857 CSMD2Q7Z408 3487 aa4.59□□□□□ -1.68
TRAPPC11-206ENST00000509857 NBPF19A0A087WUL8 3843 aa4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 PLAC8L1A1L4L8 177 aa4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 TIMM17BO60830 172 aa4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 FABP2P12104 132 aa4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 LGALS3P17931 250 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 FXYD2P54710 66 aa4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 LYRM7Q5U5X0 104 aa4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 SCGB1D4Q6XE38 83 aa4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 SLC25A29Q8N8R3 303 aa4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 WFDC9Q8NEX5 89 aa4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 FASNP49327 2511 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 C2CD3Q4AC94 2353 aa4.58□□□□□ -1.68
TRAPPC11-206ENST00000509857 AKAP9Q99996 3911 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 IGHV1-58A0A0C4DH39 117 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 A0A0J9YXY3 114 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 A0A0J9YY99 117 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 A0A1W2PPM0 123 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 LYRM9A8MSI8 78 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 TMEM238C9JI98 176 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 K7EP34 96 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 CCL25O15444 150 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 UBE2D1P51668 147 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 HERVK_113P63121 156 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 SBSPONQ8IVN8 264 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 FAM104AQ969W3 186 aa4.57□□□□□ -1.68
TRAPPC11-206ENST00000509857 NOTCH2Q04721 2471 aa4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 TENM4Q6N022 2769 aa4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 TRGV2A0A075B6R0 118 aa4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 IGHV3-73A0A0B4J1V6 119 aa4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 LINC00694P0DN24 101 aa4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 APOC4P55056 127 aa4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 C12orf74Q32Q52 190 aa4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 AMMECR1LQ6DCA0 310 aa4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 Q6ZTI0 123 aa4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 COPS9Q8WXC6 57 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms