RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TLX1NBP0CAT3 122 aa9.53□□□□□ -0.88
RAB40C-202ENST00000509637 RIGQ13278 110 aa9.53□□□□□ -0.88
RAB40C-202ENST00000509637 PEA15Q15121 130 aa9.53□□□□□ -0.88
RAB40C-202ENST00000509637 FAM19A5Q7Z5A7 132 aaPredicted RBP9.53□□□□□ -0.88
RAB40C-202ENST00000509637 DIRC1Q969H9 104 aa9.53□□□□□ -0.88
RAB40C-202ENST00000509637 SMDT1Q9H4I9 107 aa9.53□□□□□ -0.88
RAB40C-202ENST00000509637 TRBV24-1A0A075B6N3 115 aa9.52□□□□□ -0.89
RAB40C-202ENST00000509637 CLLU1Q5K131 121 aa9.52□□□□□ -0.89
RAB40C-202ENST00000509637 OR10D4PQ8NGN7 298 aa9.52□□□□□ -0.89
RAB40C-202ENST00000509637 RPL23P62829 140 aaKnown RBP9.51□□□□□ -0.89
RAB40C-202ENST00000509637 IFITM2Q01629 132 aa9.51□□□□□ -0.89
RAB40C-202ENST00000509637 GAGE2EQ4V326 116 aa9.51□□□□□ -0.89
RAB40C-202ENST00000509637 KIR2DL4Q99706 377 aa9.51□□□□□ -0.89
RAB40C-202ENST00000509637 GAGE2DQ9UEU5 116 aa9.51□□□□□ -0.89
RAB40C-202ENST00000509637 MUC2Q02817 5179 aa9.51□□□□□ -0.89
RAB40C-202ENST00000509637 TNFRSF6BO95407 300 aa9.5□□□□□ -0.89
RAB40C-202ENST00000509637 NPYP01303 97 aa9.5□□□□□ -0.89
RAB40C-202ENST00000509637 RPL32P62910 135 aaKnown RBP9.5□□□□□ -0.89
RAB40C-202ENST00000509637 C9orf129Q5T035 196 aaKnown RBP9.5□□□□□ -0.89
RAB40C-202ENST00000509637 SMIM27A0A1W2PRY6 76 aa9.49□□□□□ -0.89
RAB40C-202ENST00000509637 TCAPO15273 167 aa9.49□□□□□ -0.89
RAB40C-202ENST00000509637 MRPS36P82909 103 aaKnown RBP9.49□□□□□ -0.89
RAB40C-202ENST00000509637 FAM74A3Q4VXF1 159 aa9.49□□□□□ -0.89
RAB40C-202ENST00000509637 C2orf82Q6UX34 121 aa9.49□□□□□ -0.89
RAB40C-202ENST00000509637 C20orf78Q9BR46 151 aa9.49□□□□□ -0.89
RAB40C-202ENST00000509637 NDUFA1O15239 70 aa9.48□□□□□ -0.89
RAB40C-202ENST00000509637 IMMP2LQ96T52 175 aa9.48□□□□□ -0.89
RAB40C-202ENST00000509637 SMIM2Q9BVW6 85 aa9.48□□□□□ -0.89
RAB40C-202ENST00000509637 IGLV1-50A0A075B6I6 118 aa9.47□□□□□ -0.89
RAB40C-202ENST00000509637 PPP1R2P9O14990 202 aa9.47□□□□□ -0.89
RAB40C-202ENST00000509637 PPP1R17O96001 155 aa9.47□□□□□ -0.89
RAB40C-202ENST00000509637 SRSF3P84103 164 aaKnown RBP9.47□□□□□ -0.89
RAB40C-202ENST00000509637 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
RAB40C-202ENST00000509637 ZC2HC1BQ5TFG8 222 aa9.47□□□□□ -0.89
RAB40C-202ENST00000509637 NAT8BQ9UHF3 227 aa9.47□□□□□ -0.89
RAB40C-202ENST00000509637 LINC00862A6NCI5 91 aa9.46□□□□□ -0.9
RAB40C-202ENST00000509637 F8WDY8 70 aa9.46□□□□□ -0.9
RAB40C-202ENST00000509637 CKS2P33552 79 aa9.46□□□□□ -0.9
RAB40C-202ENST00000509637 TMEM241Q24JQ0 296 aa9.46□□□□□ -0.9
RAB40C-202ENST00000509637 SPANXA1Q9NS26 97 aa9.46□□□□□ -0.9
RAB40C-202ENST00000509637 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
RAB40C-202ENST00000509637 IFITM10A6NMD0 228 aa9.45□□□□□ -0.9
RAB40C-202ENST00000509637 D6R8Y8 96 aa9.45□□□□□ -0.9
RAB40C-202ENST00000509637 M0QXV9 152 aa9.45□□□□□ -0.9
RAB40C-202ENST00000509637 SMAGPQ0VAQ4 97 aa9.45□□□□□ -0.9
RAB40C-202ENST00000509637 TMEM18Q96B42 140 aa9.45□□□□□ -0.9
RAB40C-202ENST00000509637 PRR4Q16378 134 aa9.44□□□□□ -0.9
RAB40C-202ENST00000509637 NAT8Q9UHE5 227 aa9.44□□□□□ -0.9
RAB40C-202ENST00000509637 IGLV4-3A0A075B6K6 122 aa9.43□□□□□ -0.9
RAB40C-202ENST00000509637 HBBP68871 147 aa9.43□□□□□ -0.9
RAB40C-202ENST00000509637 ADIRFQ15847 76 aa9.43□□□□□ -0.9
RAB40C-202ENST00000509637 MRPL54Q6P161 138 aaKnown RBP9.43□□□□□ -0.9
RAB40C-202ENST00000509637 KRTAP9-2Q9BYQ4 174 aa9.43□□□□□ -0.9
RAB40C-202ENST00000509637 UQCC3Q6UW78 93 aa9.42□□□□□ -0.9
RAB40C-202ENST00000509637 LINC00173Q6ZV60 143 aa9.42□□□□□ -0.9
RAB40C-202ENST00000509637 UBE2BP63146 152 aa9.4□□□□□ -0.9
RAB40C-202ENST00000509637 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
RAB40C-202ENST00000509637 A0A087X002 238 aa9.39□□□□□ -0.91
RAB40C-202ENST00000509637 TRBV30A0A0K0K1B3 111 aa9.39□□□□□ -0.91
RAB40C-202ENST00000509637 NDUFC2-KCTD14E9PQ53 114 aa9.39□□□□□ -0.91
RAB40C-202ENST00000509637 TSPAN13O95857 204 aa9.39□□□□□ -0.91
RAB40C-202ENST00000509637 UBE2D1P51668 147 aa9.39□□□□□ -0.91
RAB40C-202ENST00000509637 LINC00469Q8N7U9 141 aa9.39□□□□□ -0.91
RAB40C-202ENST00000509637 PYGO1Q9Y3Y4 419 aa9.39□□□□□ -0.91
RAB40C-202ENST00000509637 TGIF2-C20orf24A0A0A6YYL0 155 aa9.38□□□□□ -0.91
RAB40C-202ENST00000509637 ZNF861PO60384 105 aa9.38□□□□□ -0.91
RAB40C-202ENST00000509637 COMMD7Q86VX2 200 aa9.38□□□□□ -0.91
RAB40C-202ENST00000509637 PNRC1Q12796 327 aaPredicted RBP9.37□□□□□ -0.91
RAB40C-202ENST00000509637 C22orf24Q9Y442 160 aa9.37□□□□□ -0.91
RAB40C-202ENST00000509637 A0A1B0GW15 77 aa9.36□□□□□ -0.91
RAB40C-202ENST00000509637 PRSS47A8MTI9 375 aa9.36□□□□□ -0.91
RAB40C-202ENST00000509637 TMEM136Q6ZRR5 245 aa9.36□□□□□ -0.91
RAB40C-202ENST00000509637 AMELXQ99217 191 aa9.36□□□□□ -0.91
RAB40C-202ENST00000509637 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
RAB40C-202ENST00000509637 CARHSP1Q9Y2V2 147 aaKnown RBP9.36□□□□□ -0.91
RAB40C-202ENST00000509637 TMEM218A2RU14 115 aa9.35□□□□□ -0.91
RAB40C-202ENST00000509637 IFI27P40305 119 aaPredicted RBP9.35□□□□□ -0.91
RAB40C-202ENST00000509637 TMEM141Q96I45 108 aa9.35□□□□□ -0.91
RAB40C-202ENST00000509637 PRELID3AQ96N28 172 aa9.35□□□□□ -0.91
RAB40C-202ENST00000509637 CTDSP1Q9GZU7 261 aa9.35□□□□□ -0.91
RAB40C-202ENST00000509637 ANAPC11Q9NYG5 84 aa9.35□□□□□ -0.91
RAB40C-202ENST00000509637 FAT4Q6V0I7 4981 aa9.35□□□□□ -0.91
RAB40C-202ENST00000509637 LOC389332A0A1B0GUA5 103 aa9.34□□□□□ -0.91
RAB40C-202ENST00000509637 F8W036 122 aa9.34□□□□□ -0.91
RAB40C-202ENST00000509637 RPL13AP40429 203 aaKnown RBP9.34□□□□□ -0.91
RAB40C-202ENST00000509637 LINC01561Q8N1V8 128 aa9.34□□□□□ -0.91
RAB40C-202ENST00000509637 PPBPP02775 128 aa9.33□□□□□ -0.92
RAB40C-202ENST00000509637 ORMDL3Q8N138 153 aa9.33□□□□□ -0.92
RAB40C-202ENST00000509637 PACRGQ96M98 296 aaPredicted RBP9.33□□□□□ -0.92
RAB40C-202ENST00000509637 IGIPA6NJ69 53 aa9.32□□□□□ -0.92
RAB40C-202ENST00000509637 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
RAB40C-202ENST00000509637 SEC11CQ9BY50 192 aa9.32□□□□□ -0.92
RAB40C-202ENST00000509637 RAB5AP20339 215 aa9.31□□□□□ -0.92
RAB40C-202ENST00000509637 KRTAP13-2Q52LG2 175 aa9.31□□□□□ -0.92
RAB40C-202ENST00000509637 FAM19A3Q7Z5A8 133 aa9.31□□□□□ -0.92
RAB40C-202ENST00000509637 TOMM7Q9P0U1 55 aa9.31□□□□□ -0.92
RAB40C-202ENST00000509637 MT-ND4LP03901 98 aa9.3□□□□□ -0.92
RAB40C-202ENST00000509637 ADCYAP1P18509 176 aa9.3□□□□□ -0.92
RAB40C-202ENST00000509637 TEX43Q6ZNM6 134 aa9.3□□□□□ -0.92
RAB40C-202ENST00000509637 ANAPC16Q96DE5 110 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms