RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 APOMO95445 188 aa12.71□□□□□ -0.37
FGFR4-211ENST00000509511 Q8N1X5 172 aa12.71□□□□□ -0.37
FGFR4-211ENST00000509511 C5orf38Q86SI9 138 aa12.7□□□□□ -0.38
FGFR4-211ENST00000509511 SCGB3A1Q96QR1 104 aa12.7□□□□□ -0.38
FGFR4-211ENST00000509511 AMELXQ99217 191 aa12.7□□□□□ -0.38
FGFR4-211ENST00000509511 ATP6V1G1O75348 118 aa12.69□□□□□ -0.38
FGFR4-211ENST00000509511 SLPIP03973 132 aa12.69□□□□□ -0.38
FGFR4-211ENST00000509511 UBE2D1P51668 147 aa12.69□□□□□ -0.38
FGFR4-211ENST00000509511 LINC00173Q6ZV60 143 aa12.69□□□□□ -0.38
FGFR4-211ENST00000509511 ERASQ7Z444 233 aa12.69□□□□□ -0.38
FGFR4-211ENST00000509511 IGHV3OR16-9A0A0B4J2B5 98 aa12.68□□□□□ -0.38
FGFR4-211ENST00000509511 S100A1P23297 94 aa12.67□□□□□ -0.38
FGFR4-211ENST00000509511 RAB5BP61020 215 aa12.67□□□□□ -0.38
FGFR4-211ENST00000509511 LINC00242Q5T6M2 205 aa12.67□□□□□ -0.38
FGFR4-211ENST00000509511 SCXQ7RTU7 201 aa12.67□□□□□ -0.38
FGFR4-211ENST00000509511 OR10D4PQ8NGN7 298 aa12.67□□□□□ -0.38
FGFR4-211ENST00000509511 CARD19Q96LW7 228 aa12.67□□□□□ -0.38
FGFR4-211ENST00000509511 CHAC1Q9BUX1 264 aa12.67□□□□□ -0.38
FGFR4-211ENST00000509511 SPAG11BQ08648 103 aa12.66□□□□□ -0.38
FGFR4-211ENST00000509511 ZC2HC1BQ5TFG8 222 aa12.66□□□□□ -0.38
FGFR4-211ENST00000509511 LINC00526Q96FQ7 95 aa12.66□□□□□ -0.38
FGFR4-211ENST00000509511 PKIGQ9Y2B9 76 aa12.66□□□□□ -0.38
FGFR4-211ENST00000509511 LINC00614P0C842 121 aa12.65□□□□□ -0.38
FGFR4-211ENST00000509511 SDIM1Q6ZPB5 146 aa12.65□□□□□ -0.38
FGFR4-211ENST00000509511 ORAOV1Q8WV07 137 aa12.65□□□□□ -0.38
FGFR4-211ENST00000509511 IGLV4-69A0A075B6H9 119 aa12.64□□□□□ -0.39
FGFR4-211ENST00000509511 SEC11AP67812 179 aa12.64□□□□□ -0.39
FGFR4-211ENST00000509511 A0A087WZ39 114 aa12.63□□□□□ -0.39
FGFR4-211ENST00000509511 EPM2AB3EWF7 344 aa12.63□□□□□ -0.39
FGFR4-211ENST00000509511 HBDP02042 147 aa12.63□□□□□ -0.39
FGFR4-211ENST00000509511 SYCNQ0VAF6 134 aa12.63□□□□□ -0.39
FGFR4-211ENST00000509511 URB1-AS1Q96HZ7 61 aa12.63□□□□□ -0.39
FGFR4-211ENST00000509511 SMR3BP02814 79 aaPredicted RBP12.62□□□□□ -0.39
FGFR4-211ENST00000509511 HERVK_113P63121 156 aa12.62□□□□□ -0.39
FGFR4-211ENST00000509511 Q5VSD8 79 aa12.62□□□□□ -0.39
FGFR4-211ENST00000509511 C2orf48Q96LS8 159 aa12.62□□□□□ -0.39
FGFR4-211ENST00000509511 CAMK2N2Q96S95 79 aa12.62□□□□□ -0.39
FGFR4-211ENST00000509511 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.62□□□□□ -0.39
FGFR4-211ENST00000509511 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.62□□□□□ -0.39
FGFR4-211ENST00000509511 FAM19A3Q7Z5A8 133 aa12.62□□□□□ -0.39
FGFR4-211ENST00000509511 CIRBP-AS1Q8TBR5 109 aa12.62□□□□□ -0.39
FGFR4-211ENST00000509511 KRTAP17-1Q9BYP8 105 aa12.62□□□□□ -0.39
FGFR4-211ENST00000509511 GEMIN7Q9H840 131 aaKnown RBP12.62□□□□□ -0.39
FGFR4-211ENST00000509511 COX6A2Q02221 97 aa12.61□□□□□ -0.39
FGFR4-211ENST00000509511 PCLOQ9Y6V0 5065 aa12.6□□□□□ -0.39
FGFR4-211ENST00000509511 ABCA13Q86UQ4 5058 aa12.6□□□□□ -0.39
FGFR4-211ENST00000509511 A0A096LNJ9 63 aa12.6□□□□□ -0.39
FGFR4-211ENST00000509511 FAM229AH3BQW9 127 aa12.6□□□□□ -0.39
FGFR4-211ENST00000509511 TRGC2P03986 189 aa12.6□□□□□ -0.39
FGFR4-211ENST00000509511 FAT1Q14517 4588 aa12.6□□□□□ -0.39
FGFR4-211ENST00000509511 PMCHL1Q16048 86 aa12.6□□□□□ -0.39
FGFR4-211ENST00000509511 CHCHD1Q96BP2 118 aaKnown RBP12.6□□□□□ -0.39
FGFR4-211ENST00000509511 F8WDY8 70 aa12.59□□□□□ -0.39
FGFR4-211ENST00000509511 CIRBPQ14011 172 aaKnown RBP12.59□□□□□ -0.39
FGFR4-211ENST00000509511 PMVKQ15126 192 aa12.59□□□□□ -0.39
FGFR4-211ENST00000509511 Q6ZRU5 148 aa12.59□□□□□ -0.39
FGFR4-211ENST00000509511 LINC01561Q8N1V8 128 aa12.59□□□□□ -0.39
FGFR4-211ENST00000509511 KRTAP4-5Q9BYR2 181 aa12.59□□□□□ -0.39
FGFR4-211ENST00000509511 PANO1I0J062 215 aa12.58□□□□□ -0.4
FGFR4-211ENST00000509511 CHTF8P0CG12 524 aa12.58□□□□□ -0.4
FGFR4-211ENST00000509511 LINC00528Q8N1L1 170 aa12.58□□□□□ -0.4
FGFR4-211ENST00000509511 SPACA4Q8TDM5 124 aa12.58□□□□□ -0.4
FGFR4-211ENST00000509511 PACRGQ96M98 296 aaPredicted RBP12.58□□□□□ -0.4
FGFR4-211ENST00000509511 CST9LQ9H4G1 147 aa12.58□□□□□ -0.4
FGFR4-211ENST00000509511 IGKV2-24A0A0C4DH68 120 aa12.57□□□□□ -0.4
FGFR4-211ENST00000509511 A0A0J9YXV3 536 aa12.57□□□□□ -0.4
FGFR4-211ENST00000509511 COLCA2A8K830 154 aa12.57□□□□□ -0.4
FGFR4-211ENST00000509511 NDUFA1O15239 70 aa12.57□□□□□ -0.4
FGFR4-211ENST00000509511 BAGE3Q86Y29 109 aa12.57□□□□□ -0.4
FGFR4-211ENST00000509511 TINCRA0A1B0GVN0 87 aa12.56□□□□□ -0.4
FGFR4-211ENST00000509511 ATP5LO75964 103 aa12.56□□□□□ -0.4
FGFR4-211ENST00000509511 LINC00469Q8N7U9 141 aa12.56□□□□□ -0.4
FGFR4-211ENST00000509511 LINC00474Q9P2X8 69 aa12.56□□□□□ -0.4
FGFR4-211ENST00000509511 PDZD11Q5EBL8 140 aa12.55□□□□□ -0.4
FGFR4-211ENST00000509511 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
FGFR4-211ENST00000509511 CDKN2A-AS1Q9UH64 79 aa12.55□□□□□ -0.4
FGFR4-211ENST00000509511 A0A096LNI7 61 aa12.54□□□□□ -0.4
FGFR4-211ENST00000509511 LOC107984640A0A0U1RRK4 108 aa12.54□□□□□ -0.4
FGFR4-211ENST00000509511 HSBP1O75506 76 aa12.54□□□□□ -0.4
FGFR4-211ENST00000509511 SCO1O75880 301 aa12.54□□□□□ -0.4
FGFR4-211ENST00000509511 PRSS2P07478 247 aa12.54□□□□□ -0.4
FGFR4-211ENST00000509511 MRPL35Q9NZE8 188 aaKnown RBP12.54□□□□□ -0.4
FGFR4-211ENST00000509511 NDUFA6P56556 154 aa12.53□□□□□ -0.4
FGFR4-211ENST00000509511 MAJINQ3KP22 176 aa12.53□□□□□ -0.4
FGFR4-211ENST00000509511 PLA2G1BP04054 148 aaKnown RBP12.52□□□□□ -0.41
FGFR4-211ENST00000509511 RNF151Q2KHN1 245 aa12.52□□□□□ -0.41
FGFR4-211ENST00000509511 TOMM7Q9P0U1 55 aa12.52□□□□□ -0.41
FGFR4-211ENST00000509511 IGLV5-45A0A087WSX0 123 aa12.51□□□□□ -0.41
FGFR4-211ENST00000509511 A0A087WYN8 130 aa12.51□□□□□ -0.41
FGFR4-211ENST00000509511 RPL18AQ02543 176 aaKnown RBP12.51□□□□□ -0.41
FGFR4-211ENST00000509511 KIAA0087Q14695 138 aa12.51□□□□□ -0.41
FGFR4-211ENST00000509511 PTTG1IPP53801 180 aa12.5□□□□□ -0.41
FGFR4-211ENST00000509511 Q8IZM0 81 aa12.5□□□□□ -0.41
FGFR4-211ENST00000509511 H3BRM9 83 aa12.49□□□□□ -0.41
FGFR4-211ENST00000509511 IGLC3P0DOY3 106 aa12.49□□□□□ -0.41
FGFR4-211ENST00000509511 GAGE2BQ13066 116 aa12.49□□□□□ -0.41
FGFR4-211ENST00000509511 PLAC8Q9NZF1 115 aa12.49□□□□□ -0.41
FGFR4-211ENST00000509511 VPS13BQ7Z7G8 4022 aa12.48□□□□□ -0.41
FGFR4-211ENST00000509511 TRBV30A0A0K0K1B3 111 aa12.48□□□□□ -0.41
FGFR4-211ENST00000509511 SMIM1B2RUZ4 78 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms