RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 UPK1BO75841 260 aa7.48□□□□□ -1.21
HMGCR-208ENST00000509431 KIAA0087Q14695 138 aa7.48□□□□□ -1.21
HMGCR-208ENST00000509431 KRTAP19-1Q8IUB9 90 aa7.48□□□□□ -1.21
HMGCR-208ENST00000509431 FAM19A2Q8N3H0 131 aa7.48□□□□□ -1.21
HMGCR-208ENST00000509431 ST20Q9HBF5 79 aa7.48□□□□□ -1.21
HMGCR-208ENST00000509431 FLGP20930 4061 aaPredicted RBP7.47□□□□□ -1.21
HMGCR-208ENST00000509431 RAB19A4D1S5 217 aa7.47□□□□□ -1.21
HMGCR-208ENST00000509431 ZNF727A8MUV8 499 aa7.47□□□□□ -1.21
HMGCR-208ENST00000509431 KRTAP4-16G5E9R7 235 aaPredicted RBP7.47□□□□□ -1.21
HMGCR-208ENST00000509431 PAGE4O60829 102 aa7.47□□□□□ -1.21
HMGCR-208ENST00000509431 FOXA3P55318 350 aaPredicted RBP7.47□□□□□ -1.21
HMGCR-208ENST00000509431 AKR1C8PQ5T2L2 129 aa7.47□□□□□ -1.21
HMGCR-208ENST00000509431 RNASE7Q9H1E1 156 aaKnown RBP7.47□□□□□ -1.21
HMGCR-208ENST00000509431 TRBV27A0A0K0K1C4 114 aa7.46□□□□□ -1.22
HMGCR-208ENST00000509431 PFDN1O60925 122 aa7.46□□□□□ -1.22
HMGCR-208ENST00000509431 SPINK1P00995 79 aa7.46□□□□□ -1.22
HMGCR-208ENST00000509431 PCOTHQ58A44 107 aa7.46□□□□□ -1.22
HMGCR-208ENST00000509431 COX6B2Q6YFQ2 88 aa7.46□□□□□ -1.22
HMGCR-208ENST00000509431 TMUB2Q71RG4 321 aa7.46□□□□□ -1.22
HMGCR-208ENST00000509431 MARVELD1Q9BSK0 173 aa7.46□□□□□ -1.22
HMGCR-208ENST00000509431 Q6ZUT4 128 aa7.45□□□□□ -1.22
HMGCR-208ENST00000509431 LINC00167Q96N53 147 aa7.45□□□□□ -1.22
HMGCR-208ENST00000509431 TIMM21Q9BVV7 248 aa7.45□□□□□ -1.22
HMGCR-208ENST00000509431 MACF1Q9UPN3 7388 aaKnown RBP7.44□□□□□ -1.22
HMGCR-208ENST00000509431 RPL37AP8A6NKH3 93 aa7.44□□□□□ -1.22
HMGCR-208ENST00000509431 POLR2KP53803 58 aaKnown RBP7.44□□□□□ -1.22
HMGCR-208ENST00000509431 LINC00469Q8N7U9 141 aa7.44□□□□□ -1.22
HMGCR-208ENST00000509431 SYNE2Q8WXH0 6885 aaKnown RBP7.43□□□□□ -1.22
HMGCR-208ENST00000509431 RPL35P42766 123 aaKnown RBP7.43□□□□□ -1.22
HMGCR-208ENST00000509431 C2orf82Q6UX34 121 aa7.43□□□□□ -1.22
HMGCR-208ENST00000509431 XAGE1AQ9HD64 81 aa7.43□□□□□ -1.22
HMGCR-208ENST00000509431 TGIF2-C20orf24A0A0A6YYL0 155 aa7.42□□□□□ -1.22
HMGCR-208ENST00000509431 BORCS7-ASMTA0A0B4J1R7 106 aa7.42□□□□□ -1.22
HMGCR-208ENST00000509431 FCER1GP30273 86 aa7.42□□□□□ -1.22
HMGCR-208ENST00000509431 TMEM18Q96B42 140 aa7.42□□□□□ -1.22
HMGCR-208ENST00000509431 SMIM12Q96EX1 92 aa7.41□□□□□ -1.22
HMGCR-208ENST00000509431 SSNA1O43805 119 aa7.4□□□□□ -1.22
HMGCR-208ENST00000509431 PNRC1Q12796 327 aaPredicted RBP7.4□□□□□ -1.22
HMGCR-208ENST00000509431 Q8NBF4 154 aa7.4□□□□□ -1.22
HMGCR-208ENST00000509431 LOC100996750A0A140TA64 210 aa7.39□□□□□ -1.23
HMGCR-208ENST00000509431 VCYO14598 125 aa7.39□□□□□ -1.23
HMGCR-208ENST00000509431 RPS29P62273 56 aaKnown RBP7.39□□□□□ -1.23
HMGCR-208ENST00000509431 CENPWQ5EE01 88 aa7.39□□□□□ -1.23
HMGCR-208ENST00000509431 RPL7L1Q6DKI1 246 aaKnown RBP7.39□□□□□ -1.23
HMGCR-208ENST00000509431 PLEKHB2Q96CS7 222 aa7.39□□□□□ -1.23
HMGCR-208ENST00000509431 GNB1LQ9BYB4 327 aa7.39□□□□□ -1.23
HMGCR-208ENST00000509431 KRTAP4-6Q9BYQ5 205 aa7.39□□□□□ -1.23
HMGCR-208ENST00000509431 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
HMGCR-208ENST00000509431 ENKURQ8TC29 256 aa7.38□□□□□ -1.23
HMGCR-208ENST00000509431 GAGE10A6NGK3 116 aa7.37□□□□□ -1.23
HMGCR-208ENST00000509431 RPL32P62910 135 aaKnown RBP7.37□□□□□ -1.23
HMGCR-208ENST00000509431 PRLHP81277 87 aa7.37□□□□□ -1.23
HMGCR-208ENST00000509431 KRTAP6-3Q3LI67 103 aa7.37□□□□□ -1.23
HMGCR-208ENST00000509431 Q8N377 158 aa7.37□□□□□ -1.23
HMGCR-208ENST00000509431 LINC00846Q9NV44 126 aa7.37□□□□□ -1.23
HMGCR-208ENST00000509431 SLC25A20O43772 301 aa7.36□□□□□ -1.23
HMGCR-208ENST00000509431 HBBP68871 147 aa7.36□□□□□ -1.23
HMGCR-208ENST00000509431 LINC01561Q8N1V8 128 aa7.36□□□□□ -1.23
HMGCR-208ENST00000509431 IFITM10A6NMD0 228 aa7.35□□□□□ -1.23
HMGCR-208ENST00000509431 CKS1BP61024 79 aa7.35□□□□□ -1.23
HMGCR-208ENST00000509431 FAM19A1Q7Z5A9 133 aa7.35□□□□□ -1.23
HMGCR-208ENST00000509431 C11orf52Q96A22 123 aa7.35□□□□□ -1.23
HMGCR-208ENST00000509431 IGLV5-37A0A075B6J1 123 aa7.34□□□□□ -1.23
HMGCR-208ENST00000509431 PRSS2P07478 247 aa7.34□□□□□ -1.23
HMGCR-208ENST00000509431 MRPS36P82909 103 aaKnown RBP7.34□□□□□ -1.23
HMGCR-208ENST00000509431 SPANXA1Q9NS26 97 aa7.34□□□□□ -1.23
HMGCR-208ENST00000509431 GNG4P50150 75 aa7.33□□□□□ -1.24
HMGCR-208ENST00000509431 CBLN2Q8IUK8 224 aa7.33□□□□□ -1.24
HMGCR-208ENST00000509431 KCNRGQ8N5I3 272 aa7.33□□□□□ -1.24
HMGCR-208ENST00000509431 NKAPP1Q8N9T2 125 aa7.33□□□□□ -1.24
HMGCR-208ENST00000509431 NUDT10Q8NFP7 164 aa7.33□□□□□ -1.24
HMGCR-208ENST00000509431 NUDT11Q96G61 164 aa7.33□□□□□ -1.24
HMGCR-208ENST00000509431 PPP1R17O96001 155 aa7.32□□□□□ -1.24
HMGCR-208ENST00000509431 CCL20P78556 96 aa7.32□□□□□ -1.24
HMGCR-208ENST00000509431 SFT2D1Q8WV19 159 aa7.32□□□□□ -1.24
HMGCR-208ENST00000509431 FAM104AQ969W3 186 aa7.32□□□□□ -1.24
HMGCR-208ENST00000509431 SPRR4Q96PI1 79 aa7.32□□□□□ -1.24
HMGCR-208ENST00000509431 C6orf226Q5I0X4 101 aa7.31□□□□□ -1.24
HMGCR-208ENST00000509431 MBD3L1Q8WWY6 194 aa7.31□□□□□ -1.24
HMGCR-208ENST00000509431 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
HMGCR-208ENST00000509431 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
HMGCR-208ENST00000509431 IGKV2-28A0A075B6P5 120 aa7.3□□□□□ -1.24
HMGCR-208ENST00000509431 TCAPO15273 167 aa7.3□□□□□ -1.24
HMGCR-208ENST00000509431 IGKV2D-28P01615 120 aa7.3□□□□□ -1.24
HMGCR-208ENST00000509431 SUMO2P61956 95 aaKnown RBP7.3□□□□□ -1.24
HMGCR-208ENST00000509431 PPP1R2P9O14990 202 aa7.29□□□□□ -1.24
HMGCR-208ENST00000509431 RPL39P62891 51 aaKnown RBP7.29□□□□□ -1.24
HMGCR-208ENST00000509431 Q8IZM0 81 aa7.29□□□□□ -1.24
HMGCR-208ENST00000509431 TMEM126AQ9H061 195 aa7.29□□□□□ -1.24
HMGCR-208ENST00000509431 GEMIN7Q9H840 131 aaKnown RBP7.29□□□□□ -1.24
HMGCR-208ENST00000509431 TOMM7Q9P0U1 55 aa7.29□□□□□ -1.24
HMGCR-208ENST00000509431 A0A1B0GV50 99 aa7.28□□□□□ -1.24
HMGCR-208ENST00000509431 F8VRH5 84 aa7.28□□□□□ -1.24
HMGCR-208ENST00000509431 Q6ZN92 141 aa7.28□□□□□ -1.24
HMGCR-208ENST00000509431 TMEM191AQ9H0A3 160 aa7.28□□□□□ -1.24
HMGCR-208ENST00000509431 TRBV20OR9-2A0A075B6H5 130 aa7.27□□□□□ -1.25
HMGCR-208ENST00000509431 RAB4AP20338 218 aa7.27□□□□□ -1.25
HMGCR-208ENST00000509431 HIGD2AQ9BW72 106 aa7.27□□□□□ -1.25
HMGCR-208ENST00000509431 MANBALQ9NQG1 85 aa7.27□□□□□ -1.25
HMGCR-208ENST00000509431 FAM213BQ8TBF2 198 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms