RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 RNF183Q96D59 192 aa10.38□□□□□ -0.75
PHF3-209ENST00000509330 IGLL5B9A064 214 aa10.38□□□□□ -0.75
PHF3-209ENST00000509330 PGPEP1Q9NXJ5 209 aa10.38□□□□□ -0.75
PHF3-209ENST00000509330 H7C2G1 150 aa10.38□□□□□ -0.75
PHF3-209ENST00000509330 CIDEAO60543 219 aa10.38□□□□□ -0.75
PHF3-209ENST00000509330 FABP2P12104 132 aa10.38□□□□□ -0.75
PHF3-209ENST00000509330 HERVK_113P63121 156 aa10.37□□□□□ -0.75
PHF3-209ENST00000509330 ADAMTSL4-AS1Q5T5F5 129 aa10.37□□□□□ -0.75
PHF3-209ENST00000509330 MUSTN1Q8IVN3 82 aa10.37□□□□□ -0.75
PHF3-209ENST00000509330 MTURNQ8N3F0 131 aa10.37□□□□□ -0.75
PHF3-209ENST00000509330 MIFP14174 115 aa10.37□□□□□ -0.75
PHF3-209ENST00000509330 TOMM7Q9P0U1 55 aa10.37□□□□□ -0.75
PHF3-209ENST00000509330 A4D1N5 150 aa10.36□□□□□ -0.75
PHF3-209ENST00000509330 TIRAPP58753 221 aa10.36□□□□□ -0.75
PHF3-209ENST00000509330 SHISA2Q6UWI4 295 aa10.36□□□□□ -0.75
PHF3-209ENST00000509330 CSDC2Q9Y534 153 aaKnown RBP10.36□□□□□ -0.75
PHF3-209ENST00000509330 SMIM1B2RUZ4 78 aa10.35□□□□□ -0.75
PHF3-209ENST00000509330 WIPF1O43516 503 aa10.35□□□□□ -0.75
PHF3-209ENST00000509330 ATP5G1P05496 136 aa10.35□□□□□ -0.75
PHF3-209ENST00000509330 SPART-AS1P0CW21 52 aa10.35□□□□□ -0.75
PHF3-209ENST00000509330 Q9H8V8 135 aa10.35□□□□□ -0.75
PHF3-209ENST00000509330 C5orf38Q86SI9 138 aa10.35□□□□□ -0.75
PHF3-209ENST00000509330 TMEM238LA0A1B0GVL6 79 aa10.34□□□□□ -0.75
PHF3-209ENST00000509330 A6NJY4 79 aa10.34□□□□□ -0.75
PHF3-209ENST00000509330 K7EP34 96 aa10.34□□□□□ -0.75
PHF3-209ENST00000509330 C11orf68Q9H3H3 251 aaKnown RBP10.34□□□□□ -0.75
PHF3-209ENST00000509330 EIF4EBP3O60516 100 aaPredicted RBP10.34□□□□□ -0.75
PHF3-209ENST00000509330 CFC1BP0CG36 223 aa10.34□□□□□ -0.75
PHF3-209ENST00000509330 CFC1P0CG37 223 aa10.34□□□□□ -0.75
PHF3-209ENST00000509330 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
PHF3-209ENST00000509330 LOC107984156A0A0G2JMH3 177 aa10.33□□□□□ -0.76
PHF3-209ENST00000509330 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
PHF3-209ENST00000509330 XCL1P47992 114 aa10.33□□□□□ -0.76
PHF3-209ENST00000509330 RBX1P62877 108 aa10.33□□□□□ -0.76
PHF3-209ENST00000509330 GTF2H5Q6ZYL4 71 aa10.33□□□□□ -0.76
PHF3-209ENST00000509330 ARL17AQ8IVW1 177 aa10.33□□□□□ -0.76
PHF3-209ENST00000509330 SPANXB1Q9NS25 103 aaPredicted RBP10.33□□□□□ -0.76
PHF3-209ENST00000509330 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
PHF3-209ENST00000509330 IGLV10-54A0A075B6I4 117 aa10.32□□□□□ -0.76
PHF3-209ENST00000509330 LITAFQ99732 161 aa10.32□□□□□ -0.76
PHF3-209ENST00000509330 TSPAN13O95857 204 aa10.32□□□□□ -0.76
PHF3-209ENST00000509330 SMAGPQ0VAQ4 97 aa10.32□□□□□ -0.76
PHF3-209ENST00000509330 H3BMG7 143 aa10.31□□□□□ -0.76
PHF3-209ENST00000509330 A0A1B0GWB2 263 aa10.3□□□□□ -0.76
PHF3-209ENST00000509330 MRAPQ8TCY5 172 aa10.3□□□□□ -0.76
PHF3-209ENST00000509330 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
PHF3-209ENST00000509330 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
PHF3-209ENST00000509330 IGLV5-39A0A0G2JS06 123 aa10.29□□□□□ -0.76
PHF3-209ENST00000509330 H7C423 109 aa10.29□□□□□ -0.76
PHF3-209ENST00000509330 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
PHF3-209ENST00000509330 Q6ZTC4 211 aa10.29□□□□□ -0.76
PHF3-209ENST00000509330 LINC00959A0A1B0GUT2 108 aa10.28□□□□□ -0.76
PHF3-209ENST00000509330 NDUFA1O15239 70 aa10.28□□□□□ -0.76
PHF3-209ENST00000509330 EGFEM1PQ0D2K5 195 aa10.28□□□□□ -0.76
PHF3-209ENST00000509330 Q1RN00 199 aa10.28□□□□□ -0.76
PHF3-209ENST00000509330 RPL24P83731 157 aaKnown RBP10.27□□□□□ -0.76
PHF3-209ENST00000509330 A0A0J9YWU9 116 aa10.27□□□□□ -0.77
PHF3-209ENST00000509330 PRO1854Q9UHT4 67 aa10.26□□□□□ -0.77
PHF3-209ENST00000509330 PSMB2P49721 201 aa10.26□□□□□ -0.77
PHF3-209ENST00000509330 NANOS2P60321 138 aaKnown RBP10.26□□□□□ -0.77
PHF3-209ENST00000509330 MIAQ16674 131 aa10.26□□□□□ -0.77
PHF3-209ENST00000509330 DEFB121Q5J5C9 76 aa10.26□□□□□ -0.77
PHF3-209ENST00000509330 IGHV3OR16-9A0A0B4J2B5 98 aa10.25□□□□□ -0.77
PHF3-209ENST00000509330 FAM19A3Q7Z5A8 133 aa10.25□□□□□ -0.77
PHF3-209ENST00000509330 MRPL23Q16540 153 aaKnown RBP10.25□□□□□ -0.77
PHF3-209ENST00000509330 ICOSQ9Y6W8 199 aa10.25□□□□□ -0.77
PHF3-209ENST00000509330 SCGB1C2P0DMR2 95 aa10.24□□□□□ -0.77
PHF3-209ENST00000509330 COX7B2Q8TF08 81 aa10.24□□□□□ -0.77
PHF3-209ENST00000509330 IGHV3-33P01772 117 aa10.23□□□□□ -0.77
PHF3-209ENST00000509330 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
PHF3-209ENST00000509330 RNF151Q2KHN1 245 aa10.23□□□□□ -0.77
PHF3-209ENST00000509330 SS18Q15532 418 aa10.23□□□□□ -0.77
PHF3-209ENST00000509330 DNAH3Q8TD57 4116 aa10.22□□□□□ -0.77
PHF3-209ENST00000509330 PFN2P35080 140 aa10.22□□□□□ -0.77
PHF3-209ENST00000509330 SPANXDQ9BXN6 97 aa10.22□□□□□ -0.77
PHF3-209ENST00000509330 SPANXCQ9NY87 97 aa10.22□□□□□ -0.77
PHF3-209ENST00000509330 REG3AQ06141 175 aa10.21□□□□□ -0.77
PHF3-209ENST00000509330 WFDC2Q14508 124 aa10.21□□□□□ -0.77
PHF3-209ENST00000509330 C2orf82Q6UX34 121 aa10.21□□□□□ -0.77
PHF3-209ENST00000509330 SOSTDC1Q6X4U4 206 aa10.21□□□□□ -0.77
PHF3-209ENST00000509330 KLK12Q9UKR0 248 aa10.21□□□□□ -0.77
PHF3-209ENST00000509330 ERG28Q9UKR5 140 aa10.21□□□□□ -0.77
PHF3-209ENST00000509330 A0A1B0GUV1 79 aa10.21□□□□□ -0.78
PHF3-209ENST00000509330 KPRPQ5T749 579 aaPredicted RBP10.21□□□□□ -0.78
PHF3-209ENST00000509330 LINC00308Q8TCZ7 52 aa10.2□□□□□ -0.78
PHF3-209ENST00000509330 A0A087WZ39 114 aa10.2□□□□□ -0.78
PHF3-209ENST00000509330 C6orf226Q5I0X4 101 aa10.2□□□□□ -0.78
PHF3-209ENST00000509330 CHCHD10Q8WYQ3 142 aaPredicted RBP10.2□□□□□ -0.78
PHF3-209ENST00000509330 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.19□□□□□ -0.78
PHF3-209ENST00000509330 TCL1BO95988 128 aa10.19□□□□□ -0.78
PHF3-209ENST00000509330 LINC00158P58513 81 aa10.19□□□□□ -0.78
PHF3-209ENST00000509330 LINC00526Q96FQ7 95 aa10.19□□□□□ -0.78
PHF3-209ENST00000509330 SH2D6Q7Z4S9 175 aa10.19□□□□□ -0.78
PHF3-209ENST00000509330 OCIAD2Q56VL3 154 aa10.18□□□□□ -0.78
PHF3-209ENST00000509330 LYPD5Q6UWN5 251 aa10.18□□□□□ -0.78
PHF3-209ENST00000509330 WFDC10BQ8IUB3 73 aa10.18□□□□□ -0.78
PHF3-209ENST00000509330 MIR7-3HGQ8N6C7 128 aa10.18□□□□□ -0.78
PHF3-209ENST00000509330 A0A0B4J2C4 111 aa10.18□□□□□ -0.78
PHF3-209ENST00000509330 MDFIQ99750 246 aa10.18□□□□□ -0.78
PHF3-209ENST00000509330 LELP1Q5T871 98 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms