RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 KCPQ6ZWJ8 1503 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 KDM5DQ9BY66 1539 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 LRRC37A2A6NM11 1700 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 ANKARQ7Z5J8 1434 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 SPTBP11277 2137 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 ESPL1Q14674 2120 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 PDCD5O14737 125 aa0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 ZNF137PP52743 207 aa0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 RPL37P61927 97 aaKnown RBP0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 TDRG1Q3Y452 100 aa0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 NMSQ5H8A3 153 aa0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 Q6ZRX8 168 aa0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 TMEM263Q8WUH6 116 aaKnown RBP0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 PROK2Q9HC23 129 aa0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 HIGD1BQ9P298 99 aa0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 KIF21AQ7Z4S6 1674 aa0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 PDCD11Q14690 1871 aaKnown RBP0.96□□□□□ -2.26
DEPDC1B-204ENST00000509006 CUX1P39880 1505 aa0.95□□□□□ -2.26
DEPDC1B-204ENST00000509006 POLA1P09884 1462 aaPredicted RBP0.95□□□□□ -2.26
DEPDC1B-204ENST00000509006 MYMXA0A1B0GTQ4 84 aa0.95□□□□□ -2.26
DEPDC1B-204ENST00000509006 F8WEM9 126 aa0.95□□□□□ -2.26
DEPDC1B-204ENST00000509006 SPINT3P49223 89 aa0.95□□□□□ -2.26
DEPDC1B-204ENST00000509006 PLGLAQ15195 96 aa0.95□□□□□ -2.26
DEPDC1B-204ENST00000509006 MED13Q9UHV7 2174 aa0.95□□□□□ -2.26
DEPDC1B-204ENST00000509006 PTPN23Q9H3S7 1636 aa0.95□□□□□ -2.26
DEPDC1B-204ENST00000509006 ABCA4P78363 2273 aa0.95□□□□□ -2.26
DEPDC1B-204ENST00000509006 IFT172Q9UG01 1749 aa0.95□□□□□ -2.26
DEPDC1B-204ENST00000509006 ERICH3Q5RHP9 1530 aa0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 BTAF1O14981 1849 aa0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 CCDC141Q6ZP82 1450 aa0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 GVQW2A0A096LPI5 108 aaPredicted RBP0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 TRBV6-1A0A0K0K1D8 114 aa0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 SMIM31A0A1B0GVY4 71 aa0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 M0R3E3 92 aa0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 LYNX1P0DP58 116 aa0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 GNGT1P63211 74 aa0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 WFDC2Q14508 124 aa0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 SPRR4Q96PI1 79 aa0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 MAP2P11137 1827 aaKnown RBP0.94□□□□□ -2.26
DEPDC1B-204ENST00000509006 ASCC3Q8N3C0 2202 aaKnown RBP0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 NCOA2Q15596 1464 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 ARHGEF5Q12774 1597 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 CFAP74Q9C0B2 1584 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 CEBPZOSA8MTT3 80 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 H0Y9P7 68 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 H3BUT2 72 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 IGLC2P0DOY2 106 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 IGLC3P0DOY3 106 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 KRTAP6-3Q3LI67 103 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 SPINK9Q5DT21 86 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 ATP5EP2Q5VTU8 51 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 Q6JHZ5 121 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 Q6ZSA8 131 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 FDCSPQ8NFU4 85 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 KIF20BQ96Q89 1820 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 COL4A6Q14031 1691 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 ZMYM4Q5VZL5 1548 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 CACNA1BQ00975 2339 aa0.93□□□□□ -2.26
DEPDC1B-204ENST00000509006 DOCK11Q5JSL3 2073 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 MYH4Q9Y623 1939 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 A0A1B0GUT8 65 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 UMAD1C9J7I0 102 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 K7EIL1 84 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 NDUFB1O75438 58 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 LY6G6CO95867 125 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 HAMPP81172 84 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 DEFA5Q01523 94 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 BVES-AS1Q5T3Y7 98 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 UBE2DNLQ8IWF7 75 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 C18orf32Q8TCD1 76 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 PSENENQ9NZ42 101 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 NUP188Q5SRE5 1749 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 NKTRP30414 1462 aaKnown RBP0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 WNK3Q9BYP7 1800 aa0.92□□□□□ -2.26
DEPDC1B-204ENST00000509006 A0A087WVE0 104 aa0.91□□□□□ -2.26
DEPDC1B-204ENST00000509006 A0A0D9SFI3 127 aa0.91□□□□□ -2.26
DEPDC1B-204ENST00000509006 IQCF6A8MYZ5 107 aa0.91□□□□□ -2.26
DEPDC1B-204ENST00000509006 SMIM13P0DJ93 91 aa0.91□□□□□ -2.26
DEPDC1B-204ENST00000509006 HMGA1P17096 107 aaKnown RBP0.91□□□□□ -2.26
DEPDC1B-204ENST00000509006 C10orf113Q5VZT2 155 aa0.91□□□□□ -2.26
DEPDC1B-204ENST00000509006 CCDC88BA6NC98 1476 aa0.91□□□□□ -2.26
DEPDC1B-204ENST00000509006 SCN7AQ01118 1682 aa0.91□□□□□ -2.26
DEPDC1B-204ENST00000509006 SDK1Q7Z5N4 2213 aa0.91□□□□□ -2.26
DEPDC1B-204ENST00000509006 CLIP1P30622 1438 aa0.9□□□□□ -2.26
DEPDC1B-204ENST00000509006 NEXMIFQ5QGS0 1516 aa0.9□□□□□ -2.26
DEPDC1B-204ENST00000509006 SPATA8Q6RVD6 105 aa0.9□□□□□ -2.27
DEPDC1B-204ENST00000509006 C6orf201Q7Z4U5 140 aa0.9□□□□□ -2.27
DEPDC1B-204ENST00000509006 UBE2D4Q9Y2X8 147 aa0.9□□□□□ -2.27
DEPDC1B-204ENST00000509006 C1orf167Q5SNV9 1468 aa0.9□□□□□ -2.27
DEPDC1B-204ENST00000509006 LAMA4Q16363 1823 aa0.89□□□□□ -2.27
DEPDC1B-204ENST00000509006 TECTAO75443 2155 aa0.89□□□□□ -2.27
DEPDC1B-204ENST00000509006 RGPD8O14715 1765 aaPredicted RBP0.89□□□□□ -2.27
DEPDC1B-204ENST00000509006 RGPD5Q99666 1765 aa0.89□□□□□ -2.27
DEPDC1B-204ENST00000509006 SHPRHQ149N8 1683 aa0.89□□□□□ -2.27
DEPDC1B-204ENST00000509006 DIP2BQ9P265 1576 aa0.89□□□□□ -2.27
DEPDC1B-204ENST00000509006 CFDP00746 253 aaPredicted RBP0.89□□□□□ -2.27
DEPDC1B-204ENST00000509006 PRB1P04280 392 aa0.89□□□□□ -2.27
DEPDC1B-204ENST00000509006 DEFB121Q5J5C9 76 aa0.89□□□□□ -2.27
DEPDC1B-204ENST00000509006 DEFB107AQ8IZN7 70 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms