RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 SERP2Q8N6R1 65 aa5.92□□□□□ -1.46
PDE6A-202ENST00000508173 LST1O00453 97 aa5.92□□□□□ -1.46
PDE6A-202ENST00000508173 NACAE9PAV3 2078 aa5.91□□□□□ -1.46
PDE6A-202ENST00000508173 ANKHD1Q8IWZ3 2542 aaKnown RBP5.91□□□□□ -1.46
PDE6A-202ENST00000508173 C3orf84H3BNL1 204 aa5.91□□□□□ -1.46
PDE6A-202ENST00000508173 MRGPRG-AS1Q2M3A8 158 aa5.91□□□□□ -1.46
PDE6A-202ENST00000508173 LINC00643Q86TS7 51 aa5.91□□□□□ -1.46
PDE6A-202ENST00000508173 IBA57-AS1B1ANH7 110 aa5.91□□□□□ -1.46
PDE6A-202ENST00000508173 EDN2P20800 178 aa5.91□□□□□ -1.46
PDE6A-202ENST00000508173 SCXQ7RTU7 201 aa5.91□□□□□ -1.46
PDE6A-202ENST00000508173 C1orf158Q8N1D5 194 aa5.91□□□□□ -1.46
PDE6A-202ENST00000508173 PRRC2AP48634 2157 aaKnown RBP5.91□□□□□ -1.46
PDE6A-202ENST00000508173 PLA2G1BP04054 148 aaKnown RBP5.91□□□□□ -1.46
PDE6A-202ENST00000508173 TMEM223A0PJW6 202 aa5.91□□□□□ -1.46
PDE6A-202ENST00000508173 ENHOQ6UWT2 76 aa5.91□□□□□ -1.46
PDE6A-202ENST00000508173 RPL37AP8A6NKH3 93 aa5.9□□□□□ -1.46
PDE6A-202ENST00000508173 C20orf197Q8N268 126 aa5.9□□□□□ -1.46
PDE6A-202ENST00000508173 KIAA1549Q9HCM3 1950 aa5.9□□□□□ -1.46
PDE6A-202ENST00000508173 CRIP2P52943 208 aaPredicted RBP5.9□□□□□ -1.47
PDE6A-202ENST00000508173 CHCHD7Q9BUK0 85 aa5.89□□□□□ -1.47
PDE6A-202ENST00000508173 SNURFQ9Y675 71 aa5.89□□□□□ -1.47
PDE6A-202ENST00000508173 BRI3O95415 125 aa5.89□□□□□ -1.47
PDE6A-202ENST00000508173 HIST2H2BDQ6DRA6 164 aa5.89□□□□□ -1.47
PDE6A-202ENST00000508173 C16orf90A8MZG2 172 aa5.88□□□□□ -1.47
PDE6A-202ENST00000508173 LINC00467Q9BRT7 94 aa5.88□□□□□ -1.47
PDE6A-202ENST00000508173 CCKP06307 115 aa5.88□□□□□ -1.47
PDE6A-202ENST00000508173 PIK3CD-AS1Q5SR53 167 aa5.88□□□□□ -1.47
PDE6A-202ENST00000508173 A6NED7 52 aa5.88□□□□□ -1.47
PDE6A-202ENST00000508173 C16orf95Q9H693 158 aa5.88□□□□□ -1.47
PDE6A-202ENST00000508173 FREM1Q5H8C1 2179 aa5.88□□□□□ -1.47
PDE6A-202ENST00000508173 DCANP1Q8TF63 244 aa5.87□□□□□ -1.47
PDE6A-202ENST00000508173 WFDC10AQ9H1F0 79 aa5.87□□□□□ -1.47
PDE6A-202ENST00000508173 DSCAMO60469 2012 aa5.87□□□□□ -1.47
PDE6A-202ENST00000508173 PROK1P58294 105 aa5.87□□□□□ -1.47
PDE6A-202ENST00000508173 C2orf48Q96LS8 159 aa5.87□□□□□ -1.47
PDE6A-202ENST00000508173 PCNX3Q9H6A9 2034 aa5.87□□□□□ -1.47
PDE6A-202ENST00000508173 KRTAP24-1Q3LI83 254 aa5.87□□□□□ -1.47
PDE6A-202ENST00000508173 ZNF22P17026 224 aaPredicted RBP5.87□□□□□ -1.47
PDE6A-202ENST00000508173 MUC7Q8TAX7 377 aa5.87□□□□□ -1.47
PDE6A-202ENST00000508173 ZFYVE26Q68DK2 2539 aa5.86□□□□□ -1.47
PDE6A-202ENST00000508173 C10orf99Q6UWK7 81 aa5.86□□□□□ -1.47
PDE6A-202ENST00000508173 NOTCH3Q9UM47 2321 aa5.86□□□□□ -1.47
PDE6A-202ENST00000508173 WFDC13Q8IUB5 93 aa5.86□□□□□ -1.47
PDE6A-202ENST00000508173 NRACQ8N912 160 aa5.86□□□□□ -1.47
PDE6A-202ENST00000508173 MALRD1Q5VYJ5 2156 aa5.86□□□□□ -1.47
PDE6A-202ENST00000508173 TRBV30A0A0K0K1B3 111 aa5.85□□□□□ -1.47
PDE6A-202ENST00000508173 COX6B2Q6YFQ2 88 aa5.85□□□□□ -1.47
PDE6A-202ENST00000508173 ATG2AQ2TAZ0 1938 aa5.85□□□□□ -1.47
PDE6A-202ENST00000508173 SHANK1Q9Y566 2161 aa5.85□□□□□ -1.47
PDE6A-202ENST00000508173 MDFIQ99750 246 aa5.85□□□□□ -1.47
PDE6A-202ENST00000508173 ATP5EP56381 51 aaPredicted RBP5.85□□□□□ -1.47
PDE6A-202ENST00000508173 EBI3Q14213 229 aa5.85□□□□□ -1.47
PDE6A-202ENST00000508173 Q6ZTC4 211 aa5.85□□□□□ -1.47
PDE6A-202ENST00000508173 ABCA12Q86UK0 2595 aa5.85□□□□□ -1.47
PDE6A-202ENST00000508173 SERTAD4-AS1Q5TG53 156 aa5.85□□□□□ -1.47
PDE6A-202ENST00000508173 IGLV4-3A0A075B6K6 122 aa5.84□□□□□ -1.47
PDE6A-202ENST00000508173 C11orf21Q9P2W6 132 aa5.84□□□□□ -1.47
PDE6A-202ENST00000508173 ADAMTS20P59510 1910 aa5.84□□□□□ -1.47
PDE6A-202ENST00000508173 COX17Q14061 63 aa5.84□□□□□ -1.47
PDE6A-202ENST00000508173 F8WDY8 70 aa5.84□□□□□ -1.48
PDE6A-202ENST00000508173 ESRGQ1W209 222 aa5.84□□□□□ -1.48
PDE6A-202ENST00000508173 PRR9Q5T870 116 aa5.84□□□□□ -1.48
PDE6A-202ENST00000508173 C18orf65Q6ZTR6 163 aa5.84□□□□□ -1.48
PDE6A-202ENST00000508173 C6orf223Q8N319 242 aa5.84□□□□□ -1.48
PDE6A-202ENST00000508173 C6orf99Q4VX62 202 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 CDKN2A-AS1Q9UH64 79 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 JMJD1CQ15652 2540 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 Q6JHZ5 121 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 LINC00308Q8TCZ7 52 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 LOC100131303A0A0U1RQF7 123 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 LINC00959A0A1B0GUT2 108 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 LRP4O75096 1905 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 EP400Q96L91 3159 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 LINC00526Q96FQ7 95 aa5.83□□□□□ -1.48
PDE6A-202ENST00000508173 MTORP42345 2549 aa5.82□□□□□ -1.48
PDE6A-202ENST00000508173 COX7CP15954 63 aa5.82□□□□□ -1.48
PDE6A-202ENST00000508173 EGFEM1PQ0D2K5 195 aa5.82□□□□□ -1.48
PDE6A-202ENST00000508173 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
PDE6A-202ENST00000508173 IGHV6-1A0A0B4J1U7 121 aa5.82□□□□□ -1.48
PDE6A-202ENST00000508173 ZNF73O43830 326 aaPredicted RBP5.81□□□□□ -1.48
PDE6A-202ENST00000508173 C22orf34Q6ZV56 151 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 COL4A2P08572 1712 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 PRM2P04554 102 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 TSPEAR-AS2P59090 65 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 CDIP1Q9H305 208 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 CSDC2Q9Y534 153 aaKnown RBP5.81□□□□□ -1.48
PDE6A-202ENST00000508173 MED13LQ71F56 2210 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 A0A087WVE0 104 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 IGLV1-51P01701 117 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 SPTBN4Q9H254 2564 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 TANC2Q9HCD6 1990 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 FHL3Q13643 280 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 RETNLBQ9BQ08 111 aa5.81□□□□□ -1.48
PDE6A-202ENST00000508173 DSCAML1Q8TD84 2053 aa5.8□□□□□ -1.48
PDE6A-202ENST00000508173 A0A096LNJ9 63 aa5.8□□□□□ -1.48
PDE6A-202ENST00000508173 PMAIP1Q13794 54 aa5.8□□□□□ -1.48
PDE6A-202ENST00000508173 IGLV1-40P01703 118 aa5.79□□□□□ -1.48
PDE6A-202ENST00000508173 M0QY20 66 aa5.79□□□□□ -1.48
PDE6A-202ENST00000508173 TIMM17BO60830 172 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms