RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 C2orf66Q6UXQ4 117 aa10.05□□□□□ -0.8
COL1A1-211ENST00000507689 VCX2Q9H322 139 aa10.05□□□□□ -0.8
COL1A1-211ENST00000507689 LINC00474Q9P2X8 69 aa10.05□□□□□ -0.8
COL1A1-211ENST00000507689 FABP9Q0Z7S8 132 aa10.04□□□□□ -0.8
COL1A1-211ENST00000507689 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
COL1A1-211ENST00000507689 OPRPNQ99935 248 aaPredicted RBP10.04□□□□□ -0.8
COL1A1-211ENST00000507689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.04□□□□□ -0.8
COL1A1-211ENST00000507689 APOBP04114 4563 aaKnown RBP10.04□□□□□ -0.8
COL1A1-211ENST00000507689 SMCO4Q9NRQ5 59 aa10.03□□□□□ -0.8
COL1A1-211ENST00000507689 IGLV4-69A0A075B6H9 119 aa10.02□□□□□ -0.81
COL1A1-211ENST00000507689 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.81
COL1A1-211ENST00000507689 IGKV2-24A0A0C4DH68 120 aa10.02□□□□□ -0.81
COL1A1-211ENST00000507689 LINC01549A6NIU2 74 aa10.02□□□□□ -0.81
COL1A1-211ENST00000507689 NPSP0C0P6 89 aa10.02□□□□□ -0.81
COL1A1-211ENST00000507689 SPAG11BQ08648 103 aa10.02□□□□□ -0.81
COL1A1-211ENST00000507689 MAJINQ3KP22 176 aa10.02□□□□□ -0.81
COL1A1-211ENST00000507689 OR10D4PQ8NGN7 298 aa10.02□□□□□ -0.81
COL1A1-211ENST00000507689 LINC00526Q96FQ7 95 aa10.02□□□□□ -0.81
COL1A1-211ENST00000507689 MRPL18Q9H0U6 180 aaKnown RBP10.02□□□□□ -0.81
COL1A1-211ENST00000507689 RPL37AP61513 92 aaKnown RBP10.01□□□□□ -0.81
COL1A1-211ENST00000507689 FA2HQ7L5A8 372 aa10.01□□□□□ -0.81
COL1A1-211ENST00000507689 ORAOV1Q8WV07 137 aa10.01□□□□□ -0.81
COL1A1-211ENST00000507689 C2orf48Q96LS8 159 aa10.01□□□□□ -0.81
COL1A1-211ENST00000507689 F8WDY8 70 aa10□□□□□ -0.81
COL1A1-211ENST00000507689 CHTF8P0CG12 524 aa10□□□□□ -0.81
COL1A1-211ENST00000507689 SEC11AP67812 179 aa10□□□□□ -0.81
COL1A1-211ENST00000507689 SPACA4Q8TDM5 124 aa10□□□□□ -0.81
COL1A1-211ENST00000507689 C7orf33Q8WU49 177 aa10□□□□□ -0.81
COL1A1-211ENST00000507689 LOC107984640A0A0U1RRK4 108 aa9.99□□□□□ -0.81
COL1A1-211ENST00000507689 CIRBPQ14011 172 aaKnown RBP9.99□□□□□ -0.81
COL1A1-211ENST00000507689 SCGB3A1Q96QR1 104 aa9.99□□□□□ -0.81
COL1A1-211ENST00000507689 ALKBH7Q9BT30 221 aaPredicted RBP9.99□□□□□ -0.81
COL1A1-211ENST00000507689 TRAPPC1Q9Y5R8 145 aa9.99□□□□□ -0.81
COL1A1-211ENST00000507689 A0A087WYN8 130 aa9.98□□□□□ -0.81
COL1A1-211ENST00000507689 IGHV3OR16-9A0A0B4J2B5 98 aa9.98□□□□□ -0.81
COL1A1-211ENST00000507689 NDUFA1O15239 70 aa9.97□□□□□ -0.81
COL1A1-211ENST00000507689 STPG4Q8N801 248 aa9.97□□□□□ -0.81
COL1A1-211ENST00000507689 TOMM6Q96B49 74 aa9.97□□□□□ -0.81
COL1A1-211ENST00000507689 TIMM17AQ99595 171 aa9.97□□□□□ -0.81
COL1A1-211ENST00000507689 GEMIN7Q9H840 131 aaKnown RBP9.97□□□□□ -0.81
COL1A1-211ENST00000507689 A0A087WZ39 114 aa9.96□□□□□ -0.82
COL1A1-211ENST00000507689 PANO1I0J062 215 aa9.96□□□□□ -0.82
COL1A1-211ENST00000507689 PRSS2P07478 247 aa9.96□□□□□ -0.82
COL1A1-211ENST00000507689 UBE2D1P51668 147 aa9.96□□□□□ -0.82
COL1A1-211ENST00000507689 GAGE2BQ13066 116 aa9.96□□□□□ -0.82
COL1A1-211ENST00000507689 LINC00242Q5T6M2 205 aa9.96□□□□□ -0.82
COL1A1-211ENST00000507689 Q6ZRU5 148 aa9.96□□□□□ -0.82
COL1A1-211ENST00000507689 ERASQ7Z444 233 aa9.96□□□□□ -0.82
COL1A1-211ENST00000507689 FAM104AQ969W3 186 aa9.96□□□□□ -0.82
COL1A1-211ENST00000507689 A0A096LNI7 61 aa9.95□□□□□ -0.82
COL1A1-211ENST00000507689 IGIPA6NJ69 53 aa9.95□□□□□ -0.82
COL1A1-211ENST00000507689 HERVK_113P63121 156 aa9.95□□□□□ -0.82
COL1A1-211ENST00000507689 RPL18AQ02543 176 aaKnown RBP9.95□□□□□ -0.82
COL1A1-211ENST00000507689 PACRGQ96M98 296 aaPredicted RBP9.95□□□□□ -0.82
COL1A1-211ENST00000507689 AMELXQ99217 191 aa9.95□□□□□ -0.82
COL1A1-211ENST00000507689 PLAC8Q9NZF1 115 aa9.95□□□□□ -0.82
COL1A1-211ENST00000507689 ABCA13Q86UQ4 5058 aa9.94□□□□□ -0.82
COL1A1-211ENST00000507689 RNF151Q2KHN1 245 aa9.94□□□□□ -0.82
COL1A1-211ENST00000507689 LINC01561Q8N1V8 128 aa9.94□□□□□ -0.82
COL1A1-211ENST00000507689 J3QL48 77 aa9.93□□□□□ -0.82
COL1A1-211ENST00000507689 RAB5BP61020 215 aa9.93□□□□□ -0.82
COL1A1-211ENST00000507689 PTTG1IPP53801 180 aa9.92□□□□□ -0.82
COL1A1-211ENST00000507689 MRPL35Q9NZE8 188 aaKnown RBP9.92□□□□□ -0.82
COL1A1-211ENST00000507689 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.91□□□□□ -0.82
COL1A1-211ENST00000507689 CKS1BP61024 79 aa9.91□□□□□ -0.82
COL1A1-211ENST00000507689 ZC2HC1BQ5TFG8 222 aa9.91□□□□□ -0.82
COL1A1-211ENST00000507689 TOMM7Q9P0U1 55 aa9.91□□□□□ -0.82
COL1A1-211ENST00000507689 LINC01546A6NGU7 62 aa9.9□□□□□ -0.82
COL1A1-211ENST00000507689 LINC00614P0C842 121 aa9.9□□□□□ -0.82
COL1A1-211ENST00000507689 C6orf226Q5I0X4 101 aa9.9□□□□□ -0.82
COL1A1-211ENST00000507689 LINC00173Q6ZV60 143 aa9.9□□□□□ -0.82
COL1A1-211ENST00000507689 LINC00469Q8N7U9 141 aa9.89□□□□□ -0.83
COL1A1-211ENST00000507689 SRRM2Q9UQ35 2752 aaKnown RBP9.89□□□□□ -0.83
COL1A1-211ENST00000507689 A0A0J9YXV3 536 aa9.88□□□□□ -0.83
COL1A1-211ENST00000507689 TRBV30A0A0K0K1B3 111 aa9.88□□□□□ -0.83
COL1A1-211ENST00000507689 NDUFA6P56556 154 aa9.88□□□□□ -0.83
COL1A1-211ENST00000507689 PMVKQ15126 192 aa9.88□□□□□ -0.83
COL1A1-211ENST00000507689 UNQ6190/PRO20217Q6UXQ8 127 aa9.88□□□□□ -0.83
COL1A1-211ENST00000507689 FAM19A3Q7Z5A8 133 aa9.88□□□□□ -0.83
COL1A1-211ENST00000507689 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
COL1A1-211ENST00000507689 TINCRA0A1B0GVN0 87 aa9.86□□□□□ -0.83
COL1A1-211ENST00000507689 H3BRM9 83 aa9.86□□□□□ -0.83
COL1A1-211ENST00000507689 HBDP02042 147 aa9.86□□□□□ -0.83
COL1A1-211ENST00000507689 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
COL1A1-211ENST00000507689 CDKN2A-AS1Q9UH64 79 aa9.86□□□□□ -0.83
COL1A1-211ENST00000507689 DNAH8Q96JB1 4490 aa9.86□□□□□ -0.83
COL1A1-211ENST00000507689 Q8IZM0 81 aa9.85□□□□□ -0.83
COL1A1-211ENST00000507689 ATP5LO75964 103 aa9.84□□□□□ -0.83
COL1A1-211ENST00000507689 CXCL5P42830 114 aa9.84□□□□□ -0.83
COL1A1-211ENST00000507689 KIAA0087Q14695 138 aa9.84□□□□□ -0.83
COL1A1-211ENST00000507689 GAGE2EQ4V326 116 aa9.84□□□□□ -0.83
COL1A1-211ENST00000507689 C10orf25Q5T742 122 aa9.84□□□□□ -0.83
COL1A1-211ENST00000507689 C6orf48Q9UBA6 75 aa9.84□□□□□ -0.83
COL1A1-211ENST00000507689 GAGE2DQ9UEU5 116 aa9.84□□□□□ -0.83
COL1A1-211ENST00000507689 VPS13BQ7Z7G8 4022 aa9.84□□□□□ -0.83
COL1A1-211ENST00000507689 OXTP01178 125 aa9.83□□□□□ -0.84
COL1A1-211ENST00000507689 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
COL1A1-211ENST00000507689 KRTAP10-4P60372 401 aaPredicted RBP9.83□□□□□ -0.84
COL1A1-211ENST00000507689 C9orf116Q5BN46 136 aaPredicted RBP9.83□□□□□ -0.84
COL1A1-211ENST00000507689 C2orf82Q6UX34 121 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms