RNA–Protein interactions for RNA: ENST00000507075.1

ARRDC3-204, Transcript of arrestin domain containing 3, humanhuman

TSL 2

Gene ARRDC3, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-204ENST00000507075 SHANK2Q9UPX8 1470 aa-0.69□□□□□ -2.52
ARRDC3-204ENST00000507075 WDR87Q6ZQQ6 2873 aa-0.69□□□□□ -2.52
ARRDC3-204ENST00000507075 TET3O43151 1660 aa-0.69□□□□□ -2.52
ARRDC3-204ENST00000507075 TRANK1O15050 2925 aa-0.69□□□□□ -2.52
ARRDC3-204ENST00000507075 DYNC1H1Q14204 4646 aaKnown RBP-0.69□□□□□ -2.52
ARRDC3-204ENST00000507075 BCORQ6W2J9 1755 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 PPIP5K1Q6PFW1 1433 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 PRG4Q92954 1404 aaPredicted RBP-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 CICQ96RK0 1608 aaPredicted RBP-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 TEX15Q9BXT5 2789 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 TRAV13-2A0A0B4J235 113 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 A0A1B0GX51 115 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 SCTP09683 121 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 CMPK1P30085 196 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 TPPP2P59282 170 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 UBE2D3P61077 147 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 NCS1P62166 190 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 UBE2D2P62837 147 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 RPS28P62857 69 aaKnown RBP-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 MT1HP80294 61 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 TFAMQ00059 246 aaKnown RBP-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 LELP1Q5T871 98 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 C10orf113Q5VZT2 155 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 CTAGE3PQ8IX95 158 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 TTC9CQ8N5M4 171 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 SPTSSAQ969W0 71 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 AQP10Q96PS8 301 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 SAR1AQ9NR31 198 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 NDUFA4L2Q9NRX3 87 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 LINC01558Q9Y6Z2 57 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 RELNP78509 3460 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 DNAH1Q9P2D7 4330 aa-0.7□□□□□ -2.52
ARRDC3-204ENST00000507075 C1orf167Q5SNV9 1468 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 ZNF518AQ6AHZ1 1483 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 NLRP1Q9C000 1473 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 C4AP0C0L4 1744 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 C4BP0C0L5 1744 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 TRBV7-3A0A075B6L6 115 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 SSSCA1O60232 199 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 E2F6O75461 281 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 SNCGO76070 127 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 NDUFB6O95139 128 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 IGLC6P0CF74 106 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 S100GP29377 79 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 HIST1H1AQ02539 215 aaPredicted RBP-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 ALX1Q15699 326 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 Q8N8P6 123 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 TMEM263Q8WUH6 116 aaKnown RBP-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 LCN9Q8WX39 176 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 LINC01600Q96MT4 127 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 SPRR4Q96PI1 79 aa-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 PSMG3Q9BT73 122 aaPredicted RBP-0.71□□□□□ -2.52
ARRDC3-204ENST00000507075 ZFHX3Q15911 3703 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 ROBO1Q9Y6N7 1651 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 OVOS2A0A0J9YW53 1432 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 OVOS2Q6IE36 1432 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 ANKRD50Q9ULJ7 1429 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 LRRC37AA6NMS7 1700 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 PHLPP1O60346 1717 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.72□□□□□ -2.528e-7■□□□□ 9.3
ARRDC3-204ENST00000507075 NBEAQ8NFP9 2946 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 HMGN4O00479 90 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 SFT2D2O95562 160 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 MGPP08493 103 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 GNG10P50151 68 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 SCIMPQ6UWF3 145 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 TAC4Q86UU9 113 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 FDCSPQ8NFU4 85 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 TSLPQ969D9 159 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 MGST2Q99735 147 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 DYNLRB1Q9NP97 96 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 SMPXQ9UHP9 88 aa-0.72□□□□□ -2.52
ARRDC3-204ENST00000507075 GOLGA4Q13439 2230 aaKnown RBP-0.72□□□□□ -2.53
ARRDC3-204ENST00000507075 ANKRD30AQ9BXX3 1397 aa-0.72□□□□□ -2.53
ARRDC3-204ENST00000507075 KNL1Q8NG31 2342 aa-0.72□□□□□ -2.53
ARRDC3-204ENST00000507075 GCN1Q92616 2671 aaKnown RBP-0.72□□□□□ -2.53
ARRDC3-204ENST00000507075 SCN11AQ9UI33 1791 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 PLEKHH2Q8IVE3 1493 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 KIF20BQ96Q89 1820 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 CMYA5Q8N3K9 4069 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 TOP2BQ02880 1626 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 TARBP1Q13395 1621 aaKnown RBP-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 A0A1B0GV72 72 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 C9orf92A6NGG3 77 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 E5RI56 91 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 I3L3M4 83 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 IGLC1P0CG04 106 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 LINC00694P0DN24 101 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 UBA52P62987 128 aaKnown RBP-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 CCDC153Q494R4 210 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 MORN2Q502X0 79 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 WFDC13Q8IUB5 93 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 MMGT1Q8N4V1 131 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 SKA2Q8WVK7 121 aaPredicted RBP-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 AIF1LQ9BQI0 150 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 KNDC1Q76NI1 1749 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 FOCADQ5VW36 1801 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 NCOA3Q9Y6Q9 1424 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 CCDC141Q6ZP82 1450 aa-0.73□□□□□ -2.53
ARRDC3-204ENST00000507075 SRCAPQ6ZRS2 3230 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms