RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 TRAV8-4A0A0B4J246 113 aa6.19□□□□□ -1.42
CLCN3-205ENST00000506924 SNAPINO95295 136 aa6.19□□□□□ -1.42
CLCN3-205ENST00000506924 ZNF25P17030 456 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-205ENST00000506924 RAB5AP20339 215 aa6.19□□□□□ -1.42
CLCN3-205ENST00000506924 SEC61BP60468 96 aaKnown RBP6.19□□□□□ -1.42
CLCN3-205ENST00000506924 HAMPP81172 84 aa6.19□□□□□ -1.42
CLCN3-205ENST00000506924 ZNF664Q8N3J9 261 aa6.19□□□□□ -1.42
CLCN3-205ENST00000506924 OPRPNQ99935 248 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-205ENST00000506924 CDC42SE2Q9NRR3 84 aa6.19□□□□□ -1.42
CLCN3-205ENST00000506924 UBE2D4Q9Y2X8 147 aa6.19□□□□□ -1.42
CLCN3-205ENST00000506924 LINC00959A0A1B0GUT2 108 aa6.18□□□□□ -1.42
CLCN3-205ENST00000506924 IFI27P40305 119 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-205ENST00000506924 XCL1P47992 114 aa6.18□□□□□ -1.42
CLCN3-205ENST00000506924 FABP9Q0Z7S8 132 aa6.18□□□□□ -1.42
CLCN3-205ENST00000506924 Q6ZUT4 128 aa6.18□□□□□ -1.42
CLCN3-205ENST00000506924 MRPL52Q86TS9 123 aaKnown RBP6.18□□□□□ -1.42
CLCN3-205ENST00000506924 CHCHD10Q8WYQ3 142 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-205ENST00000506924 GNB1LQ9BYB4 327 aa6.18□□□□□ -1.42
CLCN3-205ENST00000506924 LAMTOR2Q9Y2Q5 125 aa6.18□□□□□ -1.42
CLCN3-205ENST00000506924 LRP1BQ9NZR2 4599 aa6.17□□□□□ -1.42
CLCN3-205ENST00000506924 CCL25O15444 150 aa6.17□□□□□ -1.42
CLCN3-205ENST00000506924 PRSS1P07477 247 aa6.17□□□□□ -1.42
CLCN3-205ENST00000506924 Q8N8P6 123 aa6.17□□□□□ -1.42
CLCN3-205ENST00000506924 TRAV13-1A0A0B4J241 112 aa6.16□□□□□ -1.42
CLCN3-205ENST00000506924 hDV102S1A0JD36 115 aa6.16□□□□□ -1.42
CLCN3-205ENST00000506924 PRSS47A8MTI9 375 aa6.16□□□□□ -1.42
CLCN3-205ENST00000506924 SS18Q15532 418 aa6.16□□□□□ -1.42
CLCN3-205ENST00000506924 ALKBH7Q9BT30 221 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-205ENST00000506924 HIGD2BQ4VC39 106 aa6.15□□□□□ -1.42
CLCN3-205ENST00000506924 C14orf177Q52M58 125 aa6.15□□□□□ -1.42
CLCN3-205ENST00000506924 CBLN2Q8IUK8 224 aa6.15□□□□□ -1.42
CLCN3-205ENST00000506924 FAM104AQ969W3 186 aa6.15□□□□□ -1.42
CLCN3-205ENST00000506924 TIMM21Q9BVV7 248 aa6.15□□□□□ -1.42
CLCN3-205ENST00000506924 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.42
CLCN3-205ENST00000506924 TRAPPC1Q9Y5R8 145 aa6.15□□□□□ -1.42
CLCN3-205ENST00000506924 RYR1P21817 5038 aa6.15□□□□□ -1.43
CLCN3-205ENST00000506924 CDK2AP2O75956 126 aa6.14□□□□□ -1.43
CLCN3-205ENST00000506924 MT-ND6P03923 174 aa6.14□□□□□ -1.43
CLCN3-205ENST00000506924 XGP55808 180 aa6.14□□□□□ -1.43
CLCN3-205ENST00000506924 SMAGPQ0VAQ4 97 aa6.14□□□□□ -1.43
CLCN3-205ENST00000506924 COX19Q49B96 90 aa6.14□□□□□ -1.43
CLCN3-205ENST00000506924 ZC2HC1BQ5TFG8 222 aa6.14□□□□□ -1.43
CLCN3-205ENST00000506924 C2orf66Q6UXQ4 117 aa6.14□□□□□ -1.43
CLCN3-205ENST00000506924 C15orf56Q8N910 161 aa6.14□□□□□ -1.43
CLCN3-205ENST00000506924 NXT2Q9NPJ8 142 aaKnown RBP6.14□□□□□ -1.43
CLCN3-205ENST00000506924 SPANXA1Q9NS26 97 aa6.14□□□□□ -1.43
CLCN3-205ENST00000506924 HERC2O95714 4834 aa6.14□□□□□ -1.43
CLCN3-205ENST00000506924 ORMDL2Q53FV1 153 aa6.13□□□□□ -1.43
CLCN3-205ENST00000506924 LINC00526Q96FQ7 95 aa6.13□□□□□ -1.43
CLCN3-205ENST00000506924 YPEL4Q96NS1 127 aa6.13□□□□□ -1.43
CLCN3-205ENST00000506924 CYSLTR1Q9Y271 337 aa6.13□□□□□ -1.43
CLCN3-205ENST00000506924 IGLV4-3A0A075B6K6 122 aa6.12□□□□□ -1.43
CLCN3-205ENST00000506924 IFITM10A6NMD0 228 aa6.12□□□□□ -1.43
CLCN3-205ENST00000506924 C1orf196B1AJZ1 125 aa6.12□□□□□ -1.43
CLCN3-205ENST00000506924 CD164L2Q6UWJ8 174 aa6.12□□□□□ -1.43
CLCN3-205ENST00000506924 C5orf38Q86SI9 138 aa6.12□□□□□ -1.43
CLCN3-205ENST00000506924 SMR3BP02814 79 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-205ENST00000506924 MRPS36P82909 103 aaKnown RBP6.11□□□□□ -1.43
CLCN3-205ENST00000506924 CFAP161Q6P656 301 aa6.11□□□□□ -1.43
CLCN3-205ENST00000506924 FA2HQ7L5A8 372 aa6.11□□□□□ -1.43
CLCN3-205ENST00000506924 TMEM141Q96I45 108 aa6.11□□□□□ -1.43
CLCN3-205ENST00000506924 SMCO4Q9NRQ5 59 aa6.11□□□□□ -1.43
CLCN3-205ENST00000506924 PYGO1Q9Y3Y4 419 aa6.11□□□□□ -1.43
CLCN3-205ENST00000506924 APOBP04114 4563 aaKnown RBP6.11□□□□□ -1.43
CLCN3-205ENST00000506924 COX7A2LO14548 114 aa6.1□□□□□ -1.43
CLCN3-205ENST00000506924 IGHV1-58A0A0C4DH39 117 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 IGIPA6NJ69 53 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 K7EMI3 77 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 SCO1O75880 301 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 COX6A2Q02221 97 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 PMCHL1Q16048 86 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 PAPPA-AS1Q5QFB9 102 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 TEX43Q6ZNM6 134 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 LINC00173Q6ZV60 143 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 C9orf163Q8N9P6 203 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 C18orf32Q8TCD1 76 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 TOMM6Q96B49 74 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 SCGB3A1Q96QR1 104 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 VCX2Q9H322 139 aa6.09□□□□□ -1.43
CLCN3-205ENST00000506924 HSPG2P98160 4391 aa6.08□□□□□ -1.44
CLCN3-205ENST00000506924 GVQW2A0A096LPI5 108 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-205ENST00000506924 LINC01546A6NGU7 62 aa6.08□□□□□ -1.44
CLCN3-205ENST00000506924 CNBPP62633 177 aaKnown RBP6.08□□□□□ -1.44
CLCN3-205ENST00000506924 LINC00242Q5T6M2 205 aa6.08□□□□□ -1.44
CLCN3-205ENST00000506924 Q6ZN92 141 aa6.08□□□□□ -1.44
CLCN3-205ENST00000506924 IGLV4-69A0A075B6H9 119 aa6.07□□□□□ -1.44
CLCN3-205ENST00000506924 IGHV3-64A0A075B6Q5 118 aa6.07□□□□□ -1.44
CLCN3-205ENST00000506924 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-205ENST00000506924 PANO1I0J062 215 aa6.07□□□□□ -1.44
CLCN3-205ENST00000506924 LINC00614P0C842 121 aa6.07□□□□□ -1.44
CLCN3-205ENST00000506924 UBE2D1P51668 147 aa6.07□□□□□ -1.44
CLCN3-205ENST00000506924 SDIM1Q6ZPB5 146 aa6.07□□□□□ -1.44
CLCN3-205ENST00000506924 Q6ZSA8 131 aa6.07□□□□□ -1.44
CLCN3-205ENST00000506924 AMELXQ99217 191 aa6.07□□□□□ -1.44
CLCN3-205ENST00000506924 C2orf88Q9BSF0 95 aa6.07□□□□□ -1.44
CLCN3-205ENST00000506924 IGHV3OR16-9A0A0B4J2B5 98 aa6.06□□□□□ -1.44
CLCN3-205ENST00000506924 TRGC2P03986 189 aa6.06□□□□□ -1.44
CLCN3-205ENST00000506924 CHTF8P0CG12 524 aa6.06□□□□□ -1.44
CLCN3-205ENST00000506924 G0S2P27469 103 aa6.06□□□□□ -1.44
CLCN3-205ENST00000506924 SCXQ7RTU7 201 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms