RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 APOC2P02655 101 aa0.15□□□□□ -2.39
GYPB-207ENST00000506679 PI4KAP42356 2102 aa0.15□□□□□ -2.39
GYPB-207ENST00000506679 CFAP126Q5VTH2 177 aa0.15□□□□□ -2.39
GYPB-207ENST00000506679 RPL13AP3Q6NVV1 102 aa0.15□□□□□ -2.39
GYPB-207ENST00000506679 C8orf59Q8N0T1 100 aaPredicted RBP0.15□□□□□ -2.39
GYPB-207ENST00000506679 TTC9CQ8N5M4 171 aa0.15□□□□□ -2.39
GYPB-207ENST00000506679 CNFNQ9BYD5 112 aa0.15□□□□□ -2.39
GYPB-207ENST00000506679 CYP4F30PQ9H0H9 118 aa0.15□□□□□ -2.39
GYPB-207ENST00000506679 UTRNP46939 3433 aa0.15□□□□□ -2.39
GYPB-207ENST00000506679 LRRC37A2A6NM11 1700 aa0.15□□□□□ -2.39
GYPB-207ENST00000506679 ZNF815PA8K554 130 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 SSSCA1O60232 199 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 IFNGP01579 166 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 AKAIN1P0CW23 69 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 S100A3P33764 101 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 SPAG11BQ08648 103 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 SPAG11AQ6PDA7 123 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 SSBP3-AS1Q7Z2R9 100 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 PP6455Q8WZ26 134 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 SPANXDQ9BXN6 97 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 WNK1Q9H4A3 2382 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 KTN1Q86UP2 1357 aaKnown RBP0.14□□□□□ -2.39
GYPB-207ENST00000506679 MRC1P22897 1456 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 LRP1Q07954 4544 aaKnown RBP0.14□□□□□ -2.39
GYPB-207ENST00000506679 STARD9Q9P2P6 4700 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 WDR87Q6ZQQ6 2873 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 CRYBG3Q68DQ2 2970 aa0.14□□□□□ -2.39
GYPB-207ENST00000506679 PTPRZ1P23471 2315 aaPredicted RBP0.14□□□□□ -2.39
GYPB-207ENST00000506679 CPSF1Q10570 1443 aaKnown RBP0.13□□□□□ -2.39
GYPB-207ENST00000506679 SBF2Q86WG5 1849 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 FREM2Q5SZK8 3169 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.13□□□□□ -2.39
GYPB-207ENST00000506679 MIF4GDA9UHW6 222 aaKnown RBP0.13□□□□□ -2.39
GYPB-207ENST00000506679 M0R135 149 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 TNFP01375 233 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 COX17Q14061 63 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 MGST2Q99735 147 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 NPVFQ9HCQ7 196 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 SCN3BQ9NY72 215 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 DNAH7Q8WXX0 4024 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 A2ML1A8K2U0 1454 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 QRICH2Q9H0J4 1663 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 CFAP54Q96N23 3096 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 BIVM-ERCC5R4GMW8 1640 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 ALMS1Q8TCU4 4167 aa0.13□□□□□ -2.39
GYPB-207ENST00000506679 EIF4G3O43432 1585 aaKnown RBP0.12□□□□□ -2.39
GYPB-207ENST00000506679 ROCK2O75116 1388 aaKnown RBP0.12□□□□□ -2.39
GYPB-207ENST00000506679 TRBV7-3A0A075B6L6 115 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 CTXND1A0A1B0GTU2 59 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 LOC285095A0A1B0GVY8 99 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 TPPP2P59282 170 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 CATR1Q13166 79 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 KRTAP19-6Q3LI70 58 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 COMMD6Q7Z4G1 85 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 C5orf38Q86SI9 138 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 DYNLRB1Q9NP97 96 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 SPCS1Q9Y6A9 102 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 U3KQA8 63 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 V9GYH0 126 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 PSME4Q14997 1843 aa0.12□□□□□ -2.39
GYPB-207ENST00000506679 SMG6Q86US8 1419 aaKnown RBP0.12□□□□□ -2.39
GYPB-207ENST00000506679 DYNC1H1Q14204 4646 aaKnown RBP0.12□□□□□ -2.39
GYPB-207ENST00000506679 HTTP42858 3142 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 CUL7Q14999 1698 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 KIF21AQ7Z4S6 1674 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 DMXL2Q8TDJ6 3036 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 NF1P21359 2839 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 NBASA2RRP1 2371 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 SMG1Q96Q15 3661 aaKnown RBP0.11□□□□□ -2.39
GYPB-207ENST00000506679 SPTA1P02549 2419 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 LOC100130705A0A1B0GUX0 176 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 UQCR11O14957 56 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 APOC3P02656 99 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 LELP1Q5T871 98 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 MRPL54Q6P161 138 aaKnown RBP0.11□□□□□ -2.39
GYPB-207ENST00000506679 MYOZ3Q8TDC0 251 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 AMELXQ99217 191 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 NDUFA4L2Q9NRX3 87 aa0.11□□□□□ -2.39
GYPB-207ENST00000506679 RIMS1Q86UR5 1692 aaKnown RBP0.11□□□□□ -2.39
GYPB-207ENST00000506679 HRNRQ86YZ3 2850 aaPredicted RBP0.11□□□□□ -2.39
GYPB-207ENST00000506679 TACC2O95359 2948 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 MYOM2P54296 1465 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 WDR7Q9Y4E6 1490 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 SHROOM2Q13796 1616 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 NHSL1Q5SYE7 1610 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 F8VRH5 84 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 DLEU1O43261 78 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 ATP5EP56381 51 aaPredicted RBP0.1□□□□□ -2.39
GYPB-207ENST00000506679 BAGE2Q86Y30 109 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 PRO0255Q9UI72 69 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 MYOM1P52179 1685 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 ZNF236Q9UL36 1845 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 CACNA1CQ13936 2221 aa0.1□□□□□ -2.39
GYPB-207ENST00000506679 LRP6O75581 1613 aa0.09□□□□□ -2.39
GYPB-207ENST00000506679 RAPGEF6Q8TEU7 1601 aa0.09□□□□□ -2.39
GYPB-207ENST00000506679 CSPG4Q6UVK1 2322 aa0.09□□□□□ -2.39
GYPB-207ENST00000506679 PRKDCP78527 4128 aaKnown RBP0.09□□□□□ -2.39
GYPB-207ENST00000506679 MAPKBP1O60336 1514 aa0.09□□□□□ -2.39
GYPB-207ENST00000506679 SRRM2Q9UQ35 2752 aaKnown RBP0.09□□□□□ -2.39
GYPB-207ENST00000506679 ASXL3Q9C0F0 2248 aa0.09□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms