RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 SLPIP03973 132 aa10.75□□□□□ -0.69
SNCA-209ENST00000506244 Q5VSD8 79 aa10.75□□□□□ -0.69
SNCA-209ENST00000506244 C5orf38Q86SI9 138 aa10.75□□□□□ -0.69
SNCA-209ENST00000506244 CARD19Q96LW7 228 aa10.75□□□□□ -0.69
SNCA-209ENST00000506244 VCX2Q9H322 139 aa10.75□□□□□ -0.69
SNCA-209ENST00000506244 IGIPA6NJ69 53 aa10.74□□□□□ -0.69
SNCA-209ENST00000506244 SDIM1Q6ZPB5 146 aa10.74□□□□□ -0.69
SNCA-209ENST00000506244 OR10D4PQ8NGN7 298 aa10.74□□□□□ -0.69
SNCA-209ENST00000506244 IGHV3OR16-9A0A0B4J2B5 98 aa10.73□□□□□ -0.69
SNCA-209ENST00000506244 SMR3BP02814 79 aaPredicted RBP10.73□□□□□ -0.69
SNCA-209ENST00000506244 ERASQ7Z444 233 aa10.73□□□□□ -0.69
SNCA-209ENST00000506244 SLC7A5P1Q8MH63 180 aa10.73□□□□□ -0.69
SNCA-209ENST00000506244 AMELXQ99217 191 aa10.73□□□□□ -0.69
SNCA-209ENST00000506244 UBE2D1P51668 147 aa10.72□□□□□ -0.69
SNCA-209ENST00000506244 SEC11AP67812 179 aa10.72□□□□□ -0.69
SNCA-209ENST00000506244 SPAG11BQ08648 103 aa10.72□□□□□ -0.69
SNCA-209ENST00000506244 SYCNQ0VAF6 134 aa10.72□□□□□ -0.69
SNCA-209ENST00000506244 CIRBP-AS1Q8TBR5 109 aa10.72□□□□□ -0.69
SNCA-209ENST00000506244 YPEL4Q96NS1 127 aa10.72□□□□□ -0.69
SNCA-209ENST00000506244 SCGB3A1Q96QR1 104 aa10.72□□□□□ -0.69
SNCA-209ENST00000506244 RAB5BP61020 215 aa10.71□□□□□ -0.69
SNCA-209ENST00000506244 LINC00242Q5T6M2 205 aa10.71□□□□□ -0.69
SNCA-209ENST00000506244 LINC00173Q6ZV60 143 aa10.71□□□□□ -0.69
SNCA-209ENST00000506244 CBLN2Q8IUK8 224 aa10.71□□□□□ -0.69
SNCA-209ENST00000506244 C18orf32Q8TCD1 76 aa10.71□□□□□ -0.69
SNCA-209ENST00000506244 C2orf48Q96LS8 159 aa10.71□□□□□ -0.69
SNCA-209ENST00000506244 KRTAP4-5Q9BYR2 181 aa10.71□□□□□ -0.69
SNCA-209ENST00000506244 IGLV4-69A0A075B6H9 119 aa10.7□□□□□ -0.7
SNCA-209ENST00000506244 A0A087WZ39 114 aa10.7□□□□□ -0.7
SNCA-209ENST00000506244 F8WDY8 70 aa10.7□□□□□ -0.7
SNCA-209ENST00000506244 CIRBPQ14011 172 aaKnown RBP10.7□□□□□ -0.7
SNCA-209ENST00000506244 LINC00528Q8N1L1 170 aa10.7□□□□□ -0.7
SNCA-209ENST00000506244 ORAOV1Q8WV07 137 aa10.7□□□□□ -0.7
SNCA-209ENST00000506244 LINC00526Q96FQ7 95 aa10.7□□□□□ -0.7
SNCA-209ENST00000506244 CAMK2N2Q96S95 79 aa10.7□□□□□ -0.7
SNCA-209ENST00000506244 KRTAP17-1Q9BYP8 105 aa10.7□□□□□ -0.7
SNCA-209ENST00000506244 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.7□□□□□ -0.7
SNCA-209ENST00000506244 PLA2G1BP04054 148 aaKnown RBP10.69□□□□□ -0.7
SNCA-209ENST00000506244 HERVK_113P63121 156 aa10.69□□□□□ -0.7
SNCA-209ENST00000506244 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
SNCA-209ENST00000506244 LINC00474Q9P2X8 69 aa10.69□□□□□ -0.7
SNCA-209ENST00000506244 LINC00614P0C842 121 aa10.68□□□□□ -0.7
SNCA-209ENST00000506244 COX6A2Q02221 97 aa10.68□□□□□ -0.7
SNCA-209ENST00000506244 FAM19A3Q7Z5A8 133 aa10.68□□□□□ -0.7
SNCA-209ENST00000506244 SPACA4Q8TDM5 124 aa10.68□□□□□ -0.7
SNCA-209ENST00000506244 DPH3Q96FX2 82 aa10.67□□□□□ -0.7
SNCA-209ENST00000506244 GEMIN7Q9H840 131 aaKnown RBP10.67□□□□□ -0.7
SNCA-209ENST00000506244 PCLOQ9Y6V0 5065 aa10.67□□□□□ -0.7
SNCA-209ENST00000506244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.66□□□□□ -0.7
SNCA-209ENST00000506244 HBDP02042 147 aa10.66□□□□□ -0.7
SNCA-209ENST00000506244 ZC2HC1BQ5TFG8 222 aa10.66□□□□□ -0.7
SNCA-209ENST00000506244 Q6ZRU5 148 aa10.66□□□□□ -0.7
SNCA-209ENST00000506244 FAT1Q14517 4588 aa10.65□□□□□ -0.7
SNCA-209ENST00000506244 NDUFA1O15239 70 aa10.65□□□□□ -0.7
SNCA-209ENST00000506244 ABCA13Q86UQ4 5058 aa10.64□□□□□ -0.71
SNCA-209ENST00000506244 IGKV2-24A0A0C4DH68 120 aa10.64□□□□□ -0.71
SNCA-209ENST00000506244 LOC107984640A0A0U1RRK4 108 aa10.64□□□□□ -0.71
SNCA-209ENST00000506244 PANO1I0J062 215 aa10.64□□□□□ -0.71
SNCA-209ENST00000506244 CHTF8P0CG12 524 aa10.64□□□□□ -0.71
SNCA-209ENST00000506244 RNF151Q2KHN1 245 aa10.64□□□□□ -0.71
SNCA-209ENST00000506244 PACRGQ96M98 296 aaPredicted RBP10.64□□□□□ -0.71
SNCA-209ENST00000506244 VPS13BQ7Z7G8 4022 aa10.63□□□□□ -0.71
SNCA-209ENST00000506244 A0A096LNI7 61 aa10.63□□□□□ -0.71
SNCA-209ENST00000506244 PMVKQ15126 192 aa10.63□□□□□ -0.71
SNCA-209ENST00000506244 MAJINQ3KP22 176 aa10.63□□□□□ -0.71
SNCA-209ENST00000506244 URB1-AS1Q96HZ7 61 aa10.63□□□□□ -0.71
SNCA-209ENST00000506244 MRPL35Q9NZE8 188 aaKnown RBP10.63□□□□□ -0.71
SNCA-209ENST00000506244 A0A087WYN8 130 aa10.62□□□□□ -0.71
SNCA-209ENST00000506244 TINCRA0A1B0GVN0 87 aa10.62□□□□□ -0.71
SNCA-209ENST00000506244 PRSS2P07478 247 aa10.62□□□□□ -0.71
SNCA-209ENST00000506244 CHCHD1Q96BP2 118 aaKnown RBP10.62□□□□□ -0.71
SNCA-209ENST00000506244 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
SNCA-209ENST00000506244 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
SNCA-209ENST00000506244 A0A096LNJ9 63 aa10.61□□□□□ -0.71
SNCA-209ENST00000506244 ATP5LO75964 103 aa10.61□□□□□ -0.71
SNCA-209ENST00000506244 INAFM2P0DMQ5 153 aa10.61□□□□□ -0.71
SNCA-209ENST00000506244 LINC00469Q8N7U9 141 aa10.61□□□□□ -0.71
SNCA-209ENST00000506244 A0A0J9YXV3 536 aa10.6□□□□□ -0.71
SNCA-209ENST00000506244 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
SNCA-209ENST00000506244 CDKN2A-AS1Q9UH64 79 aa10.6□□□□□ -0.71
SNCA-209ENST00000506244 TRBV30A0A0K0K1B3 111 aa10.59□□□□□ -0.71
SNCA-209ENST00000506244 TRGC2P03986 189 aa10.59□□□□□ -0.71
SNCA-209ENST00000506244 PTTG1IPP53801 180 aa10.59□□□□□ -0.71
SNCA-209ENST00000506244 PMCHL1Q16048 86 aa10.59□□□□□ -0.71
SNCA-209ENST00000506244 PDZD11Q5EBL8 140 aa10.59□□□□□ -0.71
SNCA-209ENST00000506244 Q8IZM0 81 aa10.59□□□□□ -0.71
SNCA-209ENST00000506244 STPG4Q8N801 248 aa10.59□□□□□ -0.71
SNCA-209ENST00000506244 IGLV5-45A0A087WSX0 123 aa10.58□□□□□ -0.72
SNCA-209ENST00000506244 CKS1BP61024 79 aa10.58□□□□□ -0.72
SNCA-209ENST00000506244 RPL37AP61513 92 aaKnown RBP10.58□□□□□ -0.72
SNCA-209ENST00000506244 GAGE2BQ13066 116 aa10.58□□□□□ -0.72
SNCA-209ENST00000506244 KIAA0087Q14695 138 aa10.58□□□□□ -0.72
SNCA-209ENST00000506244 BAGE3Q86Y29 109 aa10.58□□□□□ -0.72
SNCA-209ENST00000506244 C7orf33Q8WU49 177 aa10.58□□□□□ -0.72
SNCA-209ENST00000506244 TOMM7Q9P0U1 55 aa10.58□□□□□ -0.72
SNCA-209ENST00000506244 H3BRM9 83 aa10.57□□□□□ -0.72
SNCA-209ENST00000506244 NDUFA6P56556 154 aa10.57□□□□□ -0.72
SNCA-209ENST00000506244 HSBP1O75506 76 aa10.56□□□□□ -0.72
SNCA-209ENST00000506244 CXCL5P42830 114 aa10.56□□□□□ -0.72
SNCA-209ENST00000506244 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms