RNA–Protein interactions for RNA: ENST00000505937.2

PCDH1-205, Transcript of protocadherin 1, humanhuman

TSL 5

Gene PCDH1, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-205ENST00000505937 ALKBH7Q9BT30 221 aaPredicted RBP9.96□□□□□ -0.82
PCDH1-205ENST00000505937 TGIF2-C20orf24A0A0A6YYL0 155 aa9.95□□□□□ -0.82
PCDH1-205ENST00000505937 PLA2G1BP04054 148 aaKnown RBP9.95□□□□□ -0.82
PCDH1-205ENST00000505937 FAM104AQ969W3 186 aa9.95□□□□□ -0.82
PCDH1-205ENST00000505937 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
PCDH1-205ENST00000505937 VCX2Q9H322 139 aa9.95□□□□□ -0.82
PCDH1-205ENST00000505937 PCLOQ9Y6V0 5065 aa9.95□□□□□ -0.82
PCDH1-205ENST00000505937 DNAH8Q96JB1 4490 aa9.94□□□□□ -0.82
PCDH1-205ENST00000505937 LINC01549A6NIU2 74 aa9.94□□□□□ -0.82
PCDH1-205ENST00000505937 SYCNQ0VAF6 134 aa9.94□□□□□ -0.82
PCDH1-205ENST00000505937 FA2HQ7L5A8 372 aa9.94□□□□□ -0.82
PCDH1-205ENST00000505937 LINC00526Q96FQ7 95 aa9.94□□□□□ -0.82
PCDH1-205ENST00000505937 SMCO4Q9NRQ5 59 aa9.94□□□□□ -0.82
PCDH1-205ENST00000505937 TRAPPC1Q9Y5R8 145 aa9.94□□□□□ -0.82
PCDH1-205ENST00000505937 IGHV3OR16-9A0A0B4J2B5 98 aa9.93□□□□□ -0.82
PCDH1-205ENST00000505937 COX6A2Q02221 97 aa9.93□□□□□ -0.82
PCDH1-205ENST00000505937 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
PCDH1-205ENST00000505937 IGLV4-69A0A075B6H9 119 aa9.92□□□□□ -0.82
PCDH1-205ENST00000505937 IGIPA6NJ69 53 aa9.92□□□□□ -0.82
PCDH1-205ENST00000505937 INAFM2P0DMQ5 153 aa9.92□□□□□ -0.82
PCDH1-205ENST00000505937 SPAG11BQ08648 103 aa9.92□□□□□ -0.82
PCDH1-205ENST00000505937 OR10D4PQ8NGN7 298 aa9.92□□□□□ -0.82
PCDH1-205ENST00000505937 TOMM6Q96B49 74 aa9.92□□□□□ -0.82
PCDH1-205ENST00000505937 TIMM17AQ99595 171 aa9.92□□□□□ -0.82
PCDH1-205ENST00000505937 ABCA13Q86UQ4 5058 aa9.92□□□□□ -0.82
PCDH1-205ENST00000505937 FAT1Q14517 4588 aa9.91□□□□□ -0.82
PCDH1-205ENST00000505937 ORAOV1Q8WV07 137 aa9.91□□□□□ -0.82
PCDH1-205ENST00000505937 C2orf48Q96LS8 159 aa9.91□□□□□ -0.82
PCDH1-205ENST00000505937 SCGB3A1Q96QR1 104 aa9.91□□□□□ -0.82
PCDH1-205ENST00000505937 CAMK2N2Q96S95 79 aa9.91□□□□□ -0.82
PCDH1-205ENST00000505937 LINC00474Q9P2X8 69 aa9.91□□□□□ -0.82
PCDH1-205ENST00000505937 UBE2D1P51668 147 aa9.9□□□□□ -0.82
PCDH1-205ENST00000505937 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
PCDH1-205ENST00000505937 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
PCDH1-205ENST00000505937 AMELXQ99217 191 aa9.9□□□□□ -0.82
PCDH1-205ENST00000505937 IGKV2-24A0A0C4DH68 120 aa9.89□□□□□ -0.83
PCDH1-205ENST00000505937 F8WDY8 70 aa9.89□□□□□ -0.83
PCDH1-205ENST00000505937 CHTF8P0CG12 524 aa9.89□□□□□ -0.83
PCDH1-205ENST00000505937 SEC11AP67812 179 aa9.89□□□□□ -0.83
PCDH1-205ENST00000505937 ERASQ7Z444 233 aa9.89□□□□□ -0.83
PCDH1-205ENST00000505937 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
PCDH1-205ENST00000505937 A0A087WZ39 114 aa9.88□□□□□ -0.83
PCDH1-205ENST00000505937 LINC01546A6NGU7 62 aa9.88□□□□□ -0.83
PCDH1-205ENST00000505937 PANO1I0J062 215 aa9.88□□□□□ -0.83
PCDH1-205ENST00000505937 MAJINQ3KP22 176 aa9.88□□□□□ -0.83
PCDH1-205ENST00000505937 A0A087WYN8 130 aa9.87□□□□□ -0.83
PCDH1-205ENST00000505937 ZC2HC1BQ5TFG8 222 aa9.87□□□□□ -0.83
PCDH1-205ENST00000505937 Q6ZRU5 148 aa9.87□□□□□ -0.83
PCDH1-205ENST00000505937 LINC00173Q6ZV60 143 aa9.87□□□□□ -0.83
PCDH1-205ENST00000505937 GEMIN7Q9H840 131 aaKnown RBP9.87□□□□□ -0.83
PCDH1-205ENST00000505937 LOC107984640A0A0U1RRK4 108 aa9.86□□□□□ -0.83
PCDH1-205ENST00000505937 NDUFA1O15239 70 aa9.86□□□□□ -0.83
PCDH1-205ENST00000505937 RAB5BP61020 215 aa9.86□□□□□ -0.83
PCDH1-205ENST00000505937 HERVK_113P63121 156 aa9.86□□□□□ -0.83
PCDH1-205ENST00000505937 LINC01561Q8N1V8 128 aa9.86□□□□□ -0.83
PCDH1-205ENST00000505937 C18orf32Q8TCD1 76 aa9.86□□□□□ -0.83
PCDH1-205ENST00000505937 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
PCDH1-205ENST00000505937 SLC7A5P1Q8MH63 180 aa9.85□□□□□ -0.83
PCDH1-205ENST00000505937 A0A096LNI7 61 aa9.84□□□□□ -0.83
PCDH1-205ENST00000505937 LINC00614P0C842 121 aa9.84□□□□□ -0.83
PCDH1-205ENST00000505937 RPL37AP61513 92 aaKnown RBP9.84□□□□□ -0.83
PCDH1-205ENST00000505937 RNF151Q2KHN1 245 aa9.84□□□□□ -0.83
PCDH1-205ENST00000505937 STPG4Q8N801 248 aa9.84□□□□□ -0.83
PCDH1-205ENST00000505937 PACRGQ96M98 296 aaPredicted RBP9.84□□□□□ -0.83
PCDH1-205ENST00000505937 MRPL35Q9NZE8 188 aaKnown RBP9.84□□□□□ -0.83
PCDH1-205ENST00000505937 PLAC8Q9NZF1 115 aa9.84□□□□□ -0.83
PCDH1-205ENST00000505937 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.83□□□□□ -0.84
PCDH1-205ENST00000505937 PRSS2P07478 247 aa9.83□□□□□ -0.84
PCDH1-205ENST00000505937 GAGE2BQ13066 116 aa9.83□□□□□ -0.84
PCDH1-205ENST00000505937 FAM19A3Q7Z5A8 133 aa9.83□□□□□ -0.84
PCDH1-205ENST00000505937 CBLN2Q8IUK8 224 aa9.83□□□□□ -0.84
PCDH1-205ENST00000505937 C7orf33Q8WU49 177 aa9.83□□□□□ -0.84
PCDH1-205ENST00000505937 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
PCDH1-205ENST00000505937 HBDP02042 147 aa9.82□□□□□ -0.84
PCDH1-205ENST00000505937 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
PCDH1-205ENST00000505937 PMVKQ15126 192 aa9.82□□□□□ -0.84
PCDH1-205ENST00000505937 YPEL4Q96NS1 127 aa9.82□□□□□ -0.84
PCDH1-205ENST00000505937 RPL18AQ02543 176 aaKnown RBP9.81□□□□□ -0.84
PCDH1-205ENST00000505937 LINC00469Q8N7U9 141 aa9.81□□□□□ -0.84
PCDH1-205ENST00000505937 FLG2Q5D862 2391 aaPredicted RBP9.81□□□□□ -0.84
PCDH1-205ENST00000505937 A0A0J9YXV3 536 aa9.8□□□□□ -0.84
PCDH1-205ENST00000505937 CST9LQ9H4G1 147 aa9.8□□□□□ -0.84
PCDH1-205ENST00000505937 TOMM7Q9P0U1 55 aa9.8□□□□□ -0.84
PCDH1-205ENST00000505937 CDKN2A-AS1Q9UH64 79 aa9.8□□□□□ -0.84
PCDH1-205ENST00000505937 TINCRA0A1B0GVN0 87 aa9.79□□□□□ -0.84
PCDH1-205ENST00000505937 CKS1BP61024 79 aa9.79□□□□□ -0.84
PCDH1-205ENST00000505937 KIAA0087Q14695 138 aa9.79□□□□□ -0.84
PCDH1-205ENST00000505937 C6orf226Q5I0X4 101 aa9.79□□□□□ -0.84
PCDH1-205ENST00000505937 UNQ6190/PRO20217Q6UXQ8 127 aa9.79□□□□□ -0.84
PCDH1-205ENST00000505937 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
PCDH1-205ENST00000505937 ATP5LO75964 103 aa9.78□□□□□ -0.84
PCDH1-205ENST00000505937 NDUFA6P56556 154 aa9.78□□□□□ -0.84
PCDH1-205ENST00000505937 C10orf25Q5T742 122 aa9.77□□□□□ -0.85
PCDH1-205ENST00000505937 Q8IZM0 81 aa9.77□□□□□ -0.85
PCDH1-205ENST00000505937 CHCHD1Q96BP2 118 aaKnown RBP9.77□□□□□ -0.85
PCDH1-205ENST00000505937 URB1-AS1Q96HZ7 61 aa9.77□□□□□ -0.85
PCDH1-205ENST00000505937 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.85
PCDH1-205ENST00000505937 A0A096LNJ9 63 aa9.76□□□□□ -0.85
PCDH1-205ENST00000505937 H3BRM9 83 aa9.76□□□□□ -0.85
PCDH1-205ENST00000505937 PMCHL1Q16048 86 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms