RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 FAM223AQ8IWN6 122 aa9.62□□□□□ -0.87
LETM1-203ENST00000505551 COPS9Q8WXC6 57 aa9.62□□□□□ -0.87
LETM1-203ENST00000505551 LINC00846Q9NV44 126 aa9.62□□□□□ -0.87
LETM1-203ENST00000505551 IGHG2P01859 326 aa9.61□□□□□ -0.87
LETM1-203ENST00000505551 UBR5O95071 2799 aaPredicted RBP9.61□□□□□ -0.87
LETM1-203ENST00000505551 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
LETM1-203ENST00000505551 OBSCN-AS1Q96MR7 158 aa9.61□□□□□ -0.87
LETM1-203ENST00000505551 CREBBPQ92793 2442 aa9.6□□□□□ -0.87
LETM1-203ENST00000505551 Q9HAA7 133 aa9.6□□□□□ -0.87
LETM1-203ENST00000505551 UBE2D4Q9Y2X8 147 aa9.6□□□□□ -0.87
LETM1-203ENST00000505551 FAM223BA6NKX1 122 aa9.6□□□□□ -0.87
LETM1-203ENST00000505551 UBE2E2Q96LR5 201 aa9.6□□□□□ -0.87
LETM1-203ENST00000505551 PSMB8P28062 276 aa9.59□□□□□ -0.87
LETM1-203ENST00000505551 SS18Q15532 418 aa9.59□□□□□ -0.87
LETM1-203ENST00000505551 CDKN2A-AS1Q9UH64 79 aa9.59□□□□□ -0.87
LETM1-203ENST00000505551 NDUFA4O00483 81 aa9.59□□□□□ -0.87
LETM1-203ENST00000505551 HILS1P60008 231 aa9.59□□□□□ -0.87
LETM1-203ENST00000505551 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
LETM1-203ENST00000505551 MRPL55Q7Z7F7 128 aaKnown RBP9.59□□□□□ -0.87
LETM1-203ENST00000505551 Q9H8V8 135 aa9.58□□□□□ -0.88
LETM1-203ENST00000505551 C14orf132Q9NPU4 83 aa9.58□□□□□ -0.88
LETM1-203ENST00000505551 MYO9AB2RTY4 2548 aa9.58□□□□□ -0.88
LETM1-203ENST00000505551 IGLV5-39A0A0G2JS06 123 aa9.58□□□□□ -0.88
LETM1-203ENST00000505551 FP248Q71RG6 208 aaPredicted RBP9.58□□□□□ -0.88
LETM1-203ENST00000505551 SETD2Q9BYW2 2564 aaPredicted RBP9.58□□□□□ -0.88
LETM1-203ENST00000505551 RPL28P46779 137 aaKnown RBP9.57□□□□□ -0.88
LETM1-203ENST00000505551 APCP25054 2843 aa9.57□□□□□ -0.88
LETM1-203ENST00000505551 TRAV12-2A0A075B6T6 113 aa9.57□□□□□ -0.88
LETM1-203ENST00000505551 PAX4O43316 350 aa9.57□□□□□ -0.88
LETM1-203ENST00000505551 KRTAP10-9P60411 292 aa9.57□□□□□ -0.88
LETM1-203ENST00000505551 OVOL2Q9BRP0 275 aa9.57□□□□□ -0.88
LETM1-203ENST00000505551 CHCHD7Q9BUK0 85 aa9.57□□□□□ -0.88
LETM1-203ENST00000505551 H3BUX3 64 aa9.56□□□□□ -0.88
LETM1-203ENST00000505551 BLCAPP62952 87 aa9.56□□□□□ -0.88
LETM1-203ENST00000505551 ZNF843Q8N446 348 aa9.56□□□□□ -0.88
LETM1-203ENST00000505551 TMEM243Q9BU79 118 aa9.56□□□□□ -0.88
LETM1-203ENST00000505551 TENM4Q6N022 2769 aa9.56□□□□□ -0.88
LETM1-203ENST00000505551 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.56□□□□□ -0.88
LETM1-203ENST00000505551 C5orf56Q8N8D9 126 aa9.56□□□□□ -0.88
LETM1-203ENST00000505551 C11orf44Q8N8P7 122 aa9.56□□□□□ -0.88
LETM1-203ENST00000505551 TRBV12-3P01733 135 aa9.55□□□□□ -0.88
LETM1-203ENST00000505551 IGKV3-7A0A075B6H7 116 aa9.55□□□□□ -0.88
LETM1-203ENST00000505551 HOXD3P31249 432 aaPredicted RBP9.55□□□□□ -0.88
LETM1-203ENST00000505551 IGHV3-11P01762 117 aa9.54□□□□□ -0.88
LETM1-203ENST00000505551 MSMBP08118 114 aa9.54□□□□□ -0.88
LETM1-203ENST00000505551 C19orf54Q5BKX5 351 aa9.54□□□□□ -0.88
LETM1-203ENST00000505551 ZNF625Q96I27 306 aaPredicted RBP9.54□□□□□ -0.88
LETM1-203ENST00000505551 SERP1Q9Y6X1 66 aa9.54□□□□□ -0.88
LETM1-203ENST00000505551 C20orf197Q8N268 126 aa9.54□□□□□ -0.88
LETM1-203ENST00000505551 NF1P21359 2839 aa9.54□□□□□ -0.88
LETM1-203ENST00000505551 GHRHP01286 108 aa9.54□□□□□ -0.88
LETM1-203ENST00000505551 ACANP16112 2415 aa9.54□□□□□ -0.88
LETM1-203ENST00000505551 IGHV1OR15-1A0A075B7D0 117 aa9.53□□□□□ -0.88
LETM1-203ENST00000505551 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.52□□□□□ -0.89
LETM1-203ENST00000505551 TRAV13-2A0A0B4J235 113 aa9.52□□□□□ -0.89
LETM1-203ENST00000505551 IGKV2-29A2NJV5 120 aaPredicted RBP9.52□□□□□ -0.89
LETM1-203ENST00000505551 RHPN1-AS1Q9BWJ2 59 aa9.52□□□□□ -0.89
LETM1-203ENST00000505551 HELZ2Q9BYK8 2649 aaKnown RBP9.52□□□□□ -0.89
LETM1-203ENST00000505551 A0A087WYN8 130 aa9.52□□□□□ -0.89
LETM1-203ENST00000505551 COX6A2Q02221 97 aa9.52□□□□□ -0.89
LETM1-203ENST00000505551 C1orf158Q8N1D5 194 aa9.52□□□□□ -0.89
LETM1-203ENST00000505551 LINC00467Q9BRT7 94 aa9.52□□□□□ -0.89
LETM1-203ENST00000505551 MOB4Q9Y3A3 225 aa9.52□□□□□ -0.89
LETM1-203ENST00000505551 NOTCH2Q04721 2471 aa9.51□□□□□ -0.89
LETM1-203ENST00000505551 APOC4P55056 127 aa9.51□□□□□ -0.89
LETM1-203ENST00000505551 RBMY1BA6NDE4 496 aaKnown RBP9.51□□□□□ -0.89
LETM1-203ENST00000505551 RBMY1EA6NEQ0 496 aaKnown RBP9.51□□□□□ -0.89
LETM1-203ENST00000505551 RBMY1DP0C7P1 496 aaKnown RBP9.51□□□□□ -0.89
LETM1-203ENST00000505551 RBMY1A1P0DJD3 496 aaKnown RBP9.51□□□□□ -0.89
LETM1-203ENST00000505551 RBMY1CP0DJD4 496 aa9.51□□□□□ -0.89
LETM1-203ENST00000505551 RBMY1FQ15415 496 aaKnown RBP9.51□□□□□ -0.89
LETM1-203ENST00000505551 WFDC9Q8NEX5 89 aa9.51□□□□□ -0.89
LETM1-203ENST00000505551 TRAV23DV6A0A075B6W5 121 aa9.5□□□□□ -0.89
LETM1-203ENST00000505551 SMIM26A0A096LP01 95 aa9.5□□□□□ -0.89
LETM1-203ENST00000505551 ATP5EP2Q5VTU8 51 aa9.5□□□□□ -0.89
LETM1-203ENST00000505551 SMIM1B2RUZ4 78 aa9.5□□□□□ -0.89
LETM1-203ENST00000505551 K7EMT4 169 aa9.5□□□□□ -0.89
LETM1-203ENST00000505551 XCL1P47992 114 aa9.5□□□□□ -0.89
LETM1-203ENST00000505551 PROK1P58294 105 aa9.5□□□□□ -0.89
LETM1-203ENST00000505551 XCL2Q9UBD3 114 aa9.5□□□□□ -0.89
LETM1-203ENST00000505551 ITPR2Q14571 2701 aa9.5□□□□□ -0.89
LETM1-203ENST00000505551 SORL1Q92673 2214 aa9.49□□□□□ -0.89
LETM1-203ENST00000505551 B4DSR2 109 aa9.49□□□□□ -0.89
LETM1-203ENST00000505551 CRPP02741 224 aa9.49□□□□□ -0.89
LETM1-203ENST00000505551 PIK3CD-AS1Q5SR53 167 aa9.49□□□□□ -0.89
LETM1-203ENST00000505551 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
LETM1-203ENST00000505551 LINC00337Q8N6G1 96 aa9.49□□□□□ -0.89
LETM1-203ENST00000505551 H7BZZ5 65 aa9.48□□□□□ -0.89
LETM1-203ENST00000505551 C10orf99Q6UWK7 81 aa9.48□□□□□ -0.89
LETM1-203ENST00000505551 LINC00474Q9P2X8 69 aa9.48□□□□□ -0.89
LETM1-203ENST00000505551 MTORP42345 2549 aa9.48□□□□□ -0.89
LETM1-203ENST00000505551 IGHV3OR16-12A0A075B7B8 117 aa9.48□□□□□ -0.89
LETM1-203ENST00000505551 IGHV3-73A0A0B4J1V6 119 aa9.48□□□□□ -0.89
LETM1-203ENST00000505551 IGHV4-59P01825 116 aa9.48□□□□□ -0.89
LETM1-203ENST00000505551 S100A7L2Q5SY68 101 aa9.48□□□□□ -0.89
LETM1-203ENST00000505551 LINC00242Q5T6M2 205 aa9.48□□□□□ -0.89
LETM1-203ENST00000505551 ITPR3Q14573 2671 aa9.48□□□□□ -0.89
LETM1-203ENST00000505551 H0YGX0 51 aa9.47□□□□□ -0.89
LETM1-203ENST00000505551 NCR3O14931 201 aa9.47□□□□□ -0.89
LETM1-203ENST00000505551 SNRPD3P62318 126 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms