RNA–Protein interactions for RNA: ENST00000505119.1

NEK1-202, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-202ENST00000505119 COPZ1P61923 177 aa-1.51□□□□□ -2.65
NEK1-202ENST00000505119 TPT1P8Q9HAU6 139 aa-1.51□□□□□ -2.65
NEK1-202ENST00000505119 SPTBN4Q9H254 2564 aa-1.51□□□□□ -2.65
NEK1-202ENST00000505119 CELSR3Q9NYQ7 3312 aa-1.51□□□□□ -2.65
NEK1-202ENST00000505119 DNAH2Q9P225 4427 aa-1.52□□□□□ -2.65
NEK1-202ENST00000505119 PLECQ15149 4684 aaKnown RBP-1.52□□□□□ -2.65
NEK1-202ENST00000505119 TPPP2P59282 170 aa-1.52□□□□□ -2.65
NEK1-202ENST00000505119 TMEM191AQ9H0A3 160 aa-1.52□□□□□ -2.65
NEK1-202ENST00000505119 POLA1P09884 1462 aaPredicted RBP-1.52□□□□□ -2.65
NEK1-202ENST00000505119 ARHGEF12Q9NZN5 1544 aa-1.52□□□□□ -2.65
NEK1-202ENST00000505119 LAMA1P25391 3075 aa-1.52□□□□□ -2.65
NEK1-202ENST00000505119 LAMA3Q16787 3333 aa-1.52□□□□□ -2.65
NEK1-202ENST00000505119 LINC00959A0A1B0GUT2 108 aa-1.53□□□□□ -2.65
NEK1-202ENST00000505119 RAPGEF6Q8TEU7 1601 aa-1.53□□□□□ -2.65
NEK1-202ENST00000505119 HTTP42858 3142 aa-1.53□□□□□ -2.66
NEK1-202ENST00000505119 SHANK2Q9UPX8 1470 aa-1.54□□□□□ -2.66
NEK1-202ENST00000505119 TRBV7-3A0A075B6L6 115 aa-1.54□□□□□ -2.66
NEK1-202ENST00000505119 HMGN4O00479 90 aa-1.54□□□□□ -2.66
NEK1-202ENST00000505119 APOC3P02656 99 aa-1.54□□□□□ -2.66
NEK1-202ENST00000505119 SMCO1Q147U7 214 aa-1.54□□□□□ -2.66
NEK1-202ENST00000505119 PYDC1Q8WXC3 89 aa-1.54□□□□□ -2.66
NEK1-202ENST00000505119 MGST2Q99735 147 aa-1.54□□□□□ -2.66
NEK1-202ENST00000505119 DYNLRB1Q9NP97 96 aa-1.54□□□□□ -2.66
NEK1-202ENST00000505119 ANKRD30AQ9BXX3 1397 aa-1.55□□□□□ -2.66
NEK1-202ENST00000505119 DNHD1Q96M86 4753 aa-1.55□□□□□ -2.66
NEK1-202ENST00000505119 SPRR4Q96PI1 79 aa-1.55□□□□□ -2.66
NEK1-202ENST00000505119 CEP152O94986 1710 aa-1.55□□□□□ -2.66
NEK1-202ENST00000505119 PKD1P98161 4303 aa-1.56□□□□□ -2.66
NEK1-202ENST00000505119 MYOM3Q5VTT5 1437 aa-1.56□□□□□ -2.66
NEK1-202ENST00000505119 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.56□□□□□ -2.66
NEK1-202ENST00000505119 FMN2Q9NZ56 1722 aa-1.56□□□□□ -2.66
NEK1-202ENST00000505119 PIGBOS1A0A0B4J2F0 54 aa-1.56□□□□□ -2.66
NEK1-202ENST00000505119 TRBV7-4A0A0J9YYF1 115 aa-1.56□□□□□ -2.66
NEK1-202ENST00000505119 ANP32BQ92688 251 aaKnown RBP-1.56□□□□□ -2.66
NEK1-202ENST00000505119 TCEAL4Q96EI5 215 aa-1.56□□□□□ -2.66
NEK1-202ENST00000505119 COPZ2Q9P299 210 aa-1.56□□□□□ -2.66
NEK1-202ENST00000505119 KIAA0556O60303 1618 aa-1.56□□□□□ -2.66
NEK1-202ENST00000505119 HMGXB3Q12766 1538 aa-1.56□□□□□ -2.66
NEK1-202ENST00000505119 MYH7P12883 1935 aa-1.57□□□□□ -2.66
NEK1-202ENST00000505119 SFT2D2O95562 160 aa-1.57□□□□□ -2.66
NEK1-202ENST00000505119 DEFB135Q30KP9 77 aa-1.57□□□□□ -2.66
NEK1-202ENST00000505119 SMIM21Q3B7S5 101 aa-1.57□□□□□ -2.66
NEK1-202ENST00000505119 C10orf113Q5VZT2 155 aa-1.57□□□□□ -2.66
NEK1-202ENST00000505119 TMEM263Q8WUH6 116 aaKnown RBP-1.57□□□□□ -2.66
NEK1-202ENST00000505119 PDCD10Q9BUL8 212 aa-1.57□□□□□ -2.66
NEK1-202ENST00000505119 CCDC167Q9P0B6 97 aa-1.57□□□□□ -2.66
NEK1-202ENST00000505119 VPS13DQ5THJ4 4388 aa-1.57□□□□□ -2.66
NEK1-202ENST00000505119 RIF1Q5UIP0 2472 aaKnown RBP-1.57□□□□□ -2.66
NEK1-202ENST00000505119 ANKRD11Q6UB99 2663 aaPredicted RBP-1.58□□□□□ -2.66
NEK1-202ENST00000505119 C12orf73Q69YU5 71 aa-1.58□□□□□ -2.66
NEK1-202ENST00000505119 LZICQ8WZA0 190 aa-1.58□□□□□ -2.66
NEK1-202ENST00000505119 APLNQ9ULZ1 77 aa-1.58□□□□□ -2.66
NEK1-202ENST00000505119 CFTRP13569 1480 aa-1.58□□□□□ -2.66
NEK1-202ENST00000505119 ARHGEF5Q12774 1597 aa-1.59□□□□□ -2.66
NEK1-202ENST00000505119 FAT3Q8TDW7 4589 aa-1.59□□□□□ -2.66
NEK1-202ENST00000505119 TEX15Q9BXT5 2789 aa-1.59□□□□□ -2.66
NEK1-202ENST00000505119 AKAP14Q86UN6 197 aa-1.59□□□□□ -2.66
NEK1-202ENST00000505119 SERP1Q9Y6X1 66 aa-1.59□□□□□ -2.66
NEK1-202ENST00000505119 GRIN2AQ12879 1464 aa-1.59□□□□□ -2.66
NEK1-202ENST00000505119 MYOM1P52179 1685 aa-1.59□□□□□ -2.66
NEK1-202ENST00000505119 ZFHX3Q15911 3703 aa-1.59□□□□□ -2.66
NEK1-202ENST00000505119 MRPL54Q6P161 138 aaKnown RBP-1.6□□□□□ -2.67
NEK1-202ENST00000505119 RERGLQ9H628 205 aa-1.6□□□□□ -2.67
NEK1-202ENST00000505119 ACACAQ13085 2346 aa-1.61□□□□□ -2.67
NEK1-202ENST00000505119 MAGI1Q96QZ7 1491 aaPredicted RBP-1.61□□□□□ -2.67
NEK1-202ENST00000505119 MT1AP04731 61 aa-1.61□□□□□ -2.67
NEK1-202ENST00000505119 IGLC1P0CG04 106 aa-1.61□□□□□ -2.67
NEK1-202ENST00000505119 SPANXDQ9BXN6 97 aa-1.61□□□□□ -2.67
NEK1-202ENST00000505119 LINC00474Q9P2X8 69 aa-1.61□□□□□ -2.67
NEK1-202ENST00000505119 PAPPA2Q9BXP8 1791 aa-1.62□□□□□ -2.67
NEK1-202ENST00000505119 CCDC168Q8NDH2 2452 aa-1.62□□□□□ -2.67
NEK1-202ENST00000505119 CUBNO60494 3623 aa-1.62□□□□□ -2.67
NEK1-202ENST00000505119 SYS1-DBNDD2H3BUS1 97 aa-1.62□□□□□ -2.67
NEK1-202ENST00000505119 MGPP08493 103 aa-1.62□□□□□ -2.67
NEK1-202ENST00000505119 NBASA2RRP1 2371 aa-1.62□□□□□ -2.67
NEK1-202ENST00000505119 COL12A1Q99715 3063 aa-1.63□□□□□ -2.67
NEK1-202ENST00000505119 FOCADQ5VW36 1801 aa-1.63□□□□□ -2.67
NEK1-202ENST00000505119 CPSF1Q10570 1443 aaKnown RBP-1.63□□□□□ -2.67
NEK1-202ENST00000505119 TET3O43151 1660 aa-1.63□□□□□ -2.67
NEK1-202ENST00000505119 LOC285095A0A1B0GVY8 99 aa-1.63□□□□□ -2.67
NEK1-202ENST00000505119 CPSF4LA6NMK7 179 aaKnown RBP-1.63□□□□□ -2.67
NEK1-202ENST00000505119 COX8AP10176 69 aa-1.63□□□□□ -2.67
NEK1-202ENST00000505119 LINC01600Q96MT4 127 aa-1.63□□□□□ -2.67
NEK1-202ENST00000505119 LRRK2Q5S007 2527 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 AKAP9Q99996 3911 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 SHROOM2Q13796 1616 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 ARPC4P59998 168 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 DR1Q01658 176 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 DEFB112Q30KQ8 113 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 MYOZ3Q8TDC0 251 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 LCN9Q8WX39 176 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 SNRNP25Q9BV90 132 aaKnown RBP-1.64□□□□□ -2.67
NEK1-202ENST00000505119 NXT2Q9NPJ8 142 aaKnown RBP-1.64□□□□□ -2.67
NEK1-202ENST00000505119 CDC42SE2Q9NRR3 84 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 TCHHQ07283 1943 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 SETBP1Q9Y6X0 1596 aa-1.64□□□□□ -2.67
NEK1-202ENST00000505119 ANK3Q12955 4377 aaKnown RBP-1.64□□□□□ -2.67
NEK1-202ENST00000505119 PHLPP1O60346 1717 aa-1.65□□□□□ -2.67
NEK1-202ENST00000505119 MT1HP80294 61 aa-1.65□□□□□ -2.67
NEK1-202ENST00000505119 COPS9Q8WXC6 57 aa-1.65□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms