RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 AP5S1Q9NUS5 200 aa10.94□□□□□ -0.66
SYNE4-207ENST00000505054 DNAH8Q96JB1 4490 aa10.94□□□□□ -0.66
SYNE4-207ENST00000505054 TRGC2P03986 189 aa10.93□□□□□ -0.66
SYNE4-207ENST00000505054 CFAP161Q6P656 301 aa10.93□□□□□ -0.66
SYNE4-207ENST00000505054 AMELXQ99217 191 aa10.93□□□□□ -0.66
SYNE4-207ENST00000505054 TIMM17AQ99595 171 aa10.93□□□□□ -0.66
SYNE4-207ENST00000505054 A0A096LNJ9 63 aa10.92□□□□□ -0.66
SYNE4-207ENST00000505054 GVQW2A0A096LPI5 108 aaPredicted RBP10.92□□□□□ -0.66
SYNE4-207ENST00000505054 SLPIP03973 132 aa10.92□□□□□ -0.66
SYNE4-207ENST00000505054 LINC00614P0C842 121 aa10.92□□□□□ -0.66
SYNE4-207ENST00000505054 HIGD2BQ4VC39 106 aa10.92□□□□□ -0.66
SYNE4-207ENST00000505054 TEX43Q6ZNM6 134 aa10.92□□□□□ -0.66
SYNE4-207ENST00000505054 J3QL48 77 aa10.91□□□□□ -0.66
SYNE4-207ENST00000505054 COX7A2LO14548 114 aa10.91□□□□□ -0.66
SYNE4-207ENST00000505054 UBE2D1P51668 147 aa10.91□□□□□ -0.66
SYNE4-207ENST00000505054 CNBPP62633 177 aaKnown RBP10.91□□□□□ -0.66
SYNE4-207ENST00000505054 Q6ZN92 141 aa10.91□□□□□ -0.66
SYNE4-207ENST00000505054 ERASQ7Z444 233 aa10.91□□□□□ -0.66
SYNE4-207ENST00000505054 SCGB3A1Q96QR1 104 aa10.91□□□□□ -0.66
SYNE4-207ENST00000505054 IGHV3OR16-9A0A0B4J2B5 98 aa10.9□□□□□ -0.66
SYNE4-207ENST00000505054 IGHV1-58A0A0C4DH39 117 aa10.9□□□□□ -0.66
SYNE4-207ENST00000505054 LINC00242Q5T6M2 205 aa10.9□□□□□ -0.66
SYNE4-207ENST00000505054 C5orf38Q86SI9 138 aa10.9□□□□□ -0.66
SYNE4-207ENST00000505054 C2orf88Q9BSF0 95 aa10.9□□□□□ -0.66
SYNE4-207ENST00000505054 VCX2Q9H322 139 aa10.9□□□□□ -0.66
SYNE4-207ENST00000505054 LINC01549A6NIU2 74 aa10.89□□□□□ -0.67
SYNE4-207ENST00000505054 RAB5BP61020 215 aa10.89□□□□□ -0.67
SYNE4-207ENST00000505054 PMCHL1Q16048 86 aa10.89□□□□□ -0.67
SYNE4-207ENST00000505054 FAM30AQ9NZY2 134 aa10.89□□□□□ -0.67
SYNE4-207ENST00000505054 COX6A2Q02221 97 aa10.88□□□□□ -0.67
SYNE4-207ENST00000505054 PAPPA-AS1Q5QFB9 102 aa10.88□□□□□ -0.67
SYNE4-207ENST00000505054 C9orf163Q8N9P6 203 aa10.88□□□□□ -0.67
SYNE4-207ENST00000505054 HBDP02042 147 aa10.87□□□□□ -0.67
SYNE4-207ENST00000505054 MALP21145 153 aa10.87□□□□□ -0.67
SYNE4-207ENST00000505054 LINC00526Q96FQ7 95 aa10.87□□□□□ -0.67
SYNE4-207ENST00000505054 Q6ZSA8 131 aa10.86□□□□□ -0.67
SYNE4-207ENST00000505054 FAM19A3Q7Z5A8 133 aa10.86□□□□□ -0.67
SYNE4-207ENST00000505054 CHCHD1Q96BP2 118 aaKnown RBP10.86□□□□□ -0.67
SYNE4-207ENST00000505054 PDZD11Q5EBL8 140 aa10.85□□□□□ -0.67
SYNE4-207ENST00000505054 ATP6V1G1O75348 118 aa10.84□□□□□ -0.67
SYNE4-207ENST00000505054 PLA2G1BP04054 148 aaKnown RBP10.84□□□□□ -0.67
SYNE4-207ENST00000505054 LINC00310P59036 64 aa10.84□□□□□ -0.67
SYNE4-207ENST00000505054 BAGE3Q86Y29 109 aa10.84□□□□□ -0.67
SYNE4-207ENST00000505054 IGHV3-64A0A075B6Q5 118 aa10.83□□□□□ -0.68
SYNE4-207ENST00000505054 A0A087WZ39 114 aa10.83□□□□□ -0.68
SYNE4-207ENST00000505054 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.83□□□□□ -0.68
SYNE4-207ENST00000505054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.83□□□□□ -0.68
SYNE4-207ENST00000505054 APOMO95445 188 aa10.83□□□□□ -0.68
SYNE4-207ENST00000505054 CST9LQ9H4G1 147 aa10.83□□□□□ -0.68
SYNE4-207ENST00000505054 IGLV4-69A0A075B6H9 119 aa10.82□□□□□ -0.68
SYNE4-207ENST00000505054 A0A0J9YXV3 536 aa10.82□□□□□ -0.68
SYNE4-207ENST00000505054 KRTAP29-1A8MX34 341 aaPredicted RBP10.82□□□□□ -0.68
SYNE4-207ENST00000505054 ZNF561-AS1K7EIQ3 104 aa10.82□□□□□ -0.68
SYNE4-207ENST00000505054 SPAG11BQ08648 103 aa10.82□□□□□ -0.68
SYNE4-207ENST00000505054 PMVKQ15126 192 aa10.82□□□□□ -0.68
SYNE4-207ENST00000505054 SDIM1Q6ZPB5 146 aa10.82□□□□□ -0.68
SYNE4-207ENST00000505054 SERF1AO75920 110 aa10.81□□□□□ -0.68
SYNE4-207ENST00000505054 S100A1P23297 94 aa10.81□□□□□ -0.68
SYNE4-207ENST00000505054 OR10D4PQ8NGN7 298 aa10.81□□□□□ -0.68
SYNE4-207ENST00000505054 ORAOV1Q8WV07 137 aa10.81□□□□□ -0.68
SYNE4-207ENST00000505054 HSBP1O75506 76 aa10.8□□□□□ -0.68
SYNE4-207ENST00000505054 SEC11AP67812 179 aa10.8□□□□□ -0.68
SYNE4-207ENST00000505054 LINC00528Q8N1L1 170 aa10.8□□□□□ -0.68
SYNE4-207ENST00000505054 PANO1I0J062 215 aa10.79□□□□□ -0.68
SYNE4-207ENST00000505054 ATP5LO75964 103 aa10.79□□□□□ -0.68
SYNE4-207ENST00000505054 HERVK_113P63121 156 aa10.79□□□□□ -0.68
SYNE4-207ENST00000505054 SYCNQ0VAF6 134 aa10.79□□□□□ -0.68
SYNE4-207ENST00000505054 LINC01561Q8N1V8 128 aa10.79□□□□□ -0.68
SYNE4-207ENST00000505054 FAM19A2Q8N3H0 131 aa10.79□□□□□ -0.68
SYNE4-207ENST00000505054 C2orf48Q96LS8 159 aa10.79□□□□□ -0.68
SYNE4-207ENST00000505054 CARD19Q96LW7 228 aa10.79□□□□□ -0.68
SYNE4-207ENST00000505054 CDKN2A-AS1Q9UH64 79 aa10.79□□□□□ -0.68
SYNE4-207ENST00000505054 TINCRA0A1B0GVN0 87 aa10.78□□□□□ -0.68
SYNE4-207ENST00000505054 Q6ZRU5 148 aa10.78□□□□□ -0.68
SYNE4-207ENST00000505054 GEMIN7Q9H840 131 aaKnown RBP10.78□□□□□ -0.68
SYNE4-207ENST00000505054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.78□□□□□ -0.68
SYNE4-207ENST00000505054 IGLV5-45A0A087WSX0 123 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 NUPR1O60356 82 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST1H2BKO60814 126 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST1H2BJP06899 126 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST1H2BOP23527 126 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST1H2BBP33778 126 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST1H2BDP58876 126 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST1H2BCP62807 126 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 KIAA0087Q14695 138 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST2H2BEQ16778 126 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.77□□□□□ -0.69
SYNE4-207ENST00000505054 SCXQ7RTU7 201 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST1H2BHQ93079 126 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 CAMK2N2Q96S95 79 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST1H2BNQ99877 126 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 HIST1H2BMQ99879 126 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 CHAC1Q9BUX1 264 aa10.77□□□□□ -0.69
SYNE4-207ENST00000505054 NDUFA6P56556 154 aa10.76□□□□□ -0.69
SYNE4-207ENST00000505054 LINC00469Q8N7U9 141 aa10.76□□□□□ -0.69
SYNE4-207ENST00000505054 CHTF8P0CG12 524 aa10.75□□□□□ -0.69
SYNE4-207ENST00000505054 IGLC3P0DOY3 106 aa10.75□□□□□ -0.69
SYNE4-207ENST00000505054 CIRBPQ14011 172 aaKnown RBP10.74□□□□□ -0.69
SYNE4-207ENST00000505054 SERTAD4-AS1Q5TG53 156 aa10.74□□□□□ -0.69
SYNE4-207ENST00000505054 CIRBP-AS1Q8TBR5 109 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms