RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 TRAV8-4A0A0B4J246 113 aa8.13□□□□□ -1.11
POLR2J3-210ENST00000504677 IGHV3OR16-9A0A0B4J2B5 98 aa8.13□□□□□ -1.11
POLR2J3-210ENST00000504677 IGLV5-39A0A0G2JS06 123 aa8.13□□□□□ -1.11
POLR2J3-210ENST00000504677 MYMXA0A1B0GTQ4 84 aa8.13□□□□□ -1.11
POLR2J3-210ENST00000504677 ZNF815PA8K554 130 aa8.13□□□□□ -1.11
POLR2J3-210ENST00000504677 SPINK8P0C7L1 97 aa8.13□□□□□ -1.11
POLR2J3-210ENST00000504677 HIGD1BQ9P298 99 aa8.13□□□□□ -1.11
POLR2J3-210ENST00000504677 A0A087WZ39 114 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 LINC00587B1AMM8 73 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 SMIM1B2RUZ4 78 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 IGHV3-30P01768 117 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 IGHV3-33P01772 117 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 IGHV3-30-3P0DP02 117 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 IGHV3-30-5P0DP03 117 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 MIAQ16674 131 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 CLPSL2Q6UWE3 100 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 CD164L2Q6UWJ8 174 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 Q8N3U1 123 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 CHCHD10Q8WYQ3 142 aaPredicted RBP8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 KLK12Q9UKR0 248 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 LINC00588Q9Y4M8 146 aa8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 PRKDCP78527 4128 aaKnown RBP8.12□□□□□ -1.11
POLR2J3-210ENST00000504677 STAB2Q8WWQ8 2551 aa8.11□□□□□ -1.11
POLR2J3-210ENST00000504677 TRAV8-3A0A0A6YYJ7 113 aa8.11□□□□□ -1.11
POLR2J3-210ENST00000504677 XCL1P47992 114 aa8.11□□□□□ -1.11
POLR2J3-210ENST00000504677 C2orf91Q6ZV80 131 aa8.11□□□□□ -1.11
POLR2J3-210ENST00000504677 APLNQ9ULZ1 77 aa8.11□□□□□ -1.11
POLR2J3-210ENST00000504677 IGHV3-64A0A075B6Q5 118 aa8.1□□□□□ -1.11
POLR2J3-210ENST00000504677 K7EP13 123 aa8.1□□□□□ -1.11
POLR2J3-210ENST00000504677 TSPEAR-AS2P59090 65 aa8.1□□□□□ -1.11
POLR2J3-210ENST00000504677 CTAG1AP78358 180 aa8.1□□□□□ -1.11
POLR2J3-210ENST00000504677 ZFAND6Q6FIF0 208 aa8.1□□□□□ -1.11
POLR2J3-210ENST00000504677 SCGB1D4Q6XE38 83 aa8.1□□□□□ -1.11
POLR2J3-210ENST00000504677 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
POLR2J3-210ENST00000504677 UBE2WQ96B02 151 aa8.1□□□□□ -1.11
POLR2J3-210ENST00000504677 TTTY13Q9BZ97 58 aa8.1□□□□□ -1.11
POLR2J3-210ENST00000504677 MEGF8Q7Z7M0 2845 aa8.1□□□□□ -1.11
POLR2J3-210ENST00000504677 COX7A2LO14548 114 aa8.09□□□□□ -1.11
POLR2J3-210ENST00000504677 SFTA2Q6UW10 78 aa8.09□□□□□ -1.11
POLR2J3-210ENST00000504677 ENHOQ6UWT2 76 aa8.09□□□□□ -1.11
POLR2J3-210ENST00000504677 MAPKAPK5-AS1Q8N8E1 139 aa8.09□□□□□ -1.11
POLR2J3-210ENST00000504677 TP73-AS1Q9UF72 201 aa8.09□□□□□ -1.11
POLR2J3-210ENST00000504677 NDUFA12Q9UI09 145 aa8.09□□□□□ -1.11
POLR2J3-210ENST00000504677 COL7A1Q02388 2944 aa8.09□□□□□ -1.12
POLR2J3-210ENST00000504677 M0R143 59 aa8.08□□□□□ -1.12
POLR2J3-210ENST00000504677 NDUFA1O15239 70 aa8.08□□□□□ -1.12
POLR2J3-210ENST00000504677 HSD52Q0P140 79 aa8.08□□□□□ -1.12
POLR2J3-210ENST00000504677 UBE2DNLQ8IWF7 75 aa8.08□□□□□ -1.12
POLR2J3-210ENST00000504677 IGLV10-54A0A075B6I4 117 aa8.07□□□□□ -1.12
POLR2J3-210ENST00000504677 APOMO95445 188 aa8.07□□□□□ -1.12
POLR2J3-210ENST00000504677 FOXI1Q12951 378 aa8.07□□□□□ -1.12
POLR2J3-210ENST00000504677 TAL2Q16559 108 aa8.07□□□□□ -1.12
POLR2J3-210ENST00000504677 C5orf38Q86SI9 138 aa8.07□□□□□ -1.12
POLR2J3-210ENST00000504677 DYNC2H1Q8NCM8 4307 aaKnown RBP8.06□□□□□ -1.12
POLR2J3-210ENST00000504677 MALP21145 153 aa8.06□□□□□ -1.12
POLR2J3-210ENST00000504677 HERV-K104P63124 156 aa8.06□□□□□ -1.12
POLR2J3-210ENST00000504677 COX7B2Q8TF08 81 aa8.06□□□□□ -1.12
POLR2J3-210ENST00000504677 C1orf43Q9BWL3 253 aa8.06□□□□□ -1.12
POLR2J3-210ENST00000504677 GAGE12HA6NDE8 117 aa8.05□□□□□ -1.12
POLR2J3-210ENST00000504677 IBA57-AS1B1ANH7 110 aa8.05□□□□□ -1.12
POLR2J3-210ENST00000504677 TMEM238C9JI98 176 aa8.05□□□□□ -1.12
POLR2J3-210ENST00000504677 Q8IZM0 81 aa8.05□□□□□ -1.12
POLR2J3-210ENST00000504677 RMI2Q96E14 147 aa8.05□□□□□ -1.12
POLR2J3-210ENST00000504677 Q9H8V8 135 aa8.05□□□□□ -1.12
POLR2J3-210ENST00000504677 SPANXB1Q9NS25 103 aaPredicted RBP8.05□□□□□ -1.12
POLR2J3-210ENST00000504677 A0A0J9YXY3 114 aa8.04□□□□□ -1.12
POLR2J3-210ENST00000504677 TIMM17BO60830 172 aa8.04□□□□□ -1.12
POLR2J3-210ENST00000504677 PRSS2P07478 247 aa8.04□□□□□ -1.12
POLR2J3-210ENST00000504677 CXCL5P42830 114 aa8.04□□□□□ -1.12
POLR2J3-210ENST00000504677 LBHQ53QV2 105 aaPredicted RBP8.04□□□□□ -1.12
POLR2J3-210ENST00000504677 CIRBPQ14011 172 aaKnown RBP8.03□□□□□ -1.12
POLR2J3-210ENST00000504677 CFAP161Q6P656 301 aa8.03□□□□□ -1.12
POLR2J3-210ENST00000504677 MUC7Q8TAX7 377 aa8.03□□□□□ -1.12
POLR2J3-210ENST00000504677 ORAOV1Q8WV07 137 aa8.03□□□□□ -1.12
POLR2J3-210ENST00000504677 ZNF625Q96I27 306 aaPredicted RBP8.03□□□□□ -1.12
POLR2J3-210ENST00000504677 HIST1H4GQ99525 98 aa8.03□□□□□ -1.12
POLR2J3-210ENST00000504677 TOMM7Q9P0U1 55 aa8.03□□□□□ -1.12
POLR2J3-210ENST00000504677 HINT1P49773 126 aaPredicted RBP8.02□□□□□ -1.13
POLR2J3-210ENST00000504677 TTC32Q5I0X7 151 aa8.02□□□□□ -1.13
POLR2J3-210ENST00000504677 BVES-AS1Q5T3Y7 98 aa8.02□□□□□ -1.13
POLR2J3-210ENST00000504677 Q6ZVH6 145 aa8.02□□□□□ -1.13
POLR2J3-210ENST00000504677 WWC2-AS2Q96NR7 200 aa8.02□□□□□ -1.13
POLR2J3-210ENST00000504677 SNHG12Q9BXW3 62 aa8.02□□□□□ -1.13
POLR2J3-210ENST00000504677 COX11Q9Y6N1 276 aa8.02□□□□□ -1.13
POLR2J3-210ENST00000504677 IGKV2D-24A0A075B6R9 120 aa8.01□□□□□ -1.13
POLR2J3-210ENST00000504677 EREGO14944 169 aa8.01□□□□□ -1.13
POLR2J3-210ENST00000504677 SRSF9Q13242 221 aaKnown RBP eCLIP8.01□□□□□ -1.13
POLR2J3-210ENST00000504677 BATFQ16520 125 aa8.01□□□□□ -1.13
POLR2J3-210ENST00000504677 C6orf226Q5I0X4 101 aa8.01□□□□□ -1.13
POLR2J3-210ENST00000504677 TM2D2Q9BX73 214 aa8.01□□□□□ -1.13
POLR2J3-210ENST00000504677 GCSHP23434 173 aa8□□□□□ -1.13
POLR2J3-210ENST00000504677 KRTAP26-1Q6PEX3 210 aa8□□□□□ -1.13
POLR2J3-210ENST00000504677 CEND1Q8N111 149 aa8□□□□□ -1.13
POLR2J3-210ENST00000504677 COPS9Q8WXC6 57 aa8□□□□□ -1.13
POLR2J3-210ENST00000504677 SPANXDQ9BXN6 97 aa8□□□□□ -1.13
POLR2J3-210ENST00000504677 SPANXCQ9NY87 97 aa8□□□□□ -1.13
POLR2J3-210ENST00000504677 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
POLR2J3-210ENST00000504677 A6NDN8 102 aa7.99□□□□□ -1.13
POLR2J3-210ENST00000504677 A6NJY4 79 aa7.99□□□□□ -1.13
POLR2J3-210ENST00000504677 CKS1BP61024 79 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms