RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 SMIM7Q9BQ49 75 aa7.3□□□□□ -1.24
NEDD9-209ENST00000504634 TIMM21Q9BVV7 248 aa7.3□□□□□ -1.24
NEDD9-209ENST00000504634 RPL13AP40429 203 aaKnown RBP7.29□□□□□ -1.24
NEDD9-209ENST00000504634 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
NEDD9-209ENST00000504634 LINC01551Q86U37 167 aa7.29□□□□□ -1.24
NEDD9-209ENST00000504634 KRTAP11-1Q8IUC1 163 aa7.29□□□□□ -1.24
NEDD9-209ENST00000504634 OSTCQ9NRP0 149 aa7.29□□□□□ -1.24
NEDD9-209ENST00000504634 M0QXV9 152 aa7.28□□□□□ -1.24
NEDD9-209ENST00000504634 TLX1NBP0CAT3 122 aa7.28□□□□□ -1.24
NEDD9-209ENST00000504634 RPL39P62891 51 aaKnown RBP7.28□□□□□ -1.24
NEDD9-209ENST00000504634 BLOC1S1P78537 153 aa7.28□□□□□ -1.24
NEDD9-209ENST00000504634 UNQ6190/PRO20217Q6UXQ8 127 aa7.28□□□□□ -1.24
NEDD9-209ENST00000504634 EIF5A2Q9GZV4 153 aaKnown RBP7.28□□□□□ -1.24
NEDD9-209ENST00000504634 C6orf48Q9UBA6 75 aa7.28□□□□□ -1.24
NEDD9-209ENST00000504634 IGHV3OR16-9A0A0B4J2B5 98 aa7.27□□□□□ -1.25
NEDD9-209ENST00000504634 IFITM10A6NMD0 228 aa7.27□□□□□ -1.25
NEDD9-209ENST00000504634 ZNF727A8MUV8 499 aa7.27□□□□□ -1.25
NEDD9-209ENST00000504634 TCAPO15273 167 aa7.27□□□□□ -1.25
NEDD9-209ENST00000504634 KRTAP1-4P0C5Y4 121 aa7.27□□□□□ -1.25
NEDD9-209ENST00000504634 HBBP68871 147 aa7.27□□□□□ -1.25
NEDD9-209ENST00000504634 MRPL51Q4U2R6 128 aaKnown RBP7.27□□□□□ -1.25
NEDD9-209ENST00000504634 C20orf78Q9BR46 151 aa7.27□□□□□ -1.25
NEDD9-209ENST00000504634 SMDT1Q9H4I9 107 aa7.27□□□□□ -1.25
NEDD9-209ENST00000504634 SPANXA1Q9NS26 97 aa7.27□□□□□ -1.25
NEDD9-209ENST00000504634 TGIF2-C20orf24A0A0A6YYL0 155 aa7.26□□□□□ -1.25
NEDD9-209ENST00000504634 CKS2P33552 79 aa7.26□□□□□ -1.25
NEDD9-209ENST00000504634 NAT8BQ9UHF3 227 aa7.26□□□□□ -1.25
NEDD9-209ENST00000504634 LINC00862A6NCI5 91 aa7.25□□□□□ -1.25
NEDD9-209ENST00000504634 FAM104BQ5XKR9 115 aa7.25□□□□□ -1.25
NEDD9-209ENST00000504634 ALKAL2Q6UX46 152 aa7.25□□□□□ -1.25
NEDD9-209ENST00000504634 PACRGQ96M98 296 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-209ENST00000504634 V9GYV3 84 aa7.25□□□□□ -1.25
NEDD9-209ENST00000504634 MRPS36P82909 103 aaKnown RBP7.24□□□□□ -1.25
NEDD9-209ENST00000504634 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
NEDD9-209ENST00000504634 CARHSP1Q9Y2V2 147 aaKnown RBP7.24□□□□□ -1.25
NEDD9-209ENST00000504634 TRBV24-1A0A075B6N3 115 aa7.23□□□□□ -1.25
NEDD9-209ENST00000504634 TNFRSF6BO95407 300 aa7.23□□□□□ -1.25
NEDD9-209ENST00000504634 TSPAN13O95857 204 aa7.23□□□□□ -1.25
NEDD9-209ENST00000504634 RPL32P62910 135 aaKnown RBP7.23□□□□□ -1.25
NEDD9-209ENST00000504634 FAM104AQ969W3 186 aa7.23□□□□□ -1.25
NEDD9-209ENST00000504634 TRBV30A0A0K0K1B3 111 aa7.22□□□□□ -1.25
NEDD9-209ENST00000504634 NDUFC2-KCTD14E9PQ53 114 aa7.22□□□□□ -1.25
NEDD9-209ENST00000504634 ZNF861PO60384 105 aa7.22□□□□□ -1.25
NEDD9-209ENST00000504634 IFI27P40305 119 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-209ENST00000504634 SMIM2Q9BVW6 85 aa7.22□□□□□ -1.25
NEDD9-209ENST00000504634 D6R8Y8 96 aa7.21□□□□□ -1.26
NEDD9-209ENST00000504634 SRP19P09132 144 aaKnown RBP7.21□□□□□ -1.26
NEDD9-209ENST00000504634 KIAA0087Q14695 138 aa7.21□□□□□ -1.26
NEDD9-209ENST00000504634 FAM74A3Q4VXF1 159 aa7.21□□□□□ -1.26
NEDD9-209ENST00000504634 C9orf129Q5T035 196 aaKnown RBP7.21□□□□□ -1.26
NEDD9-209ENST00000504634 C2orf82Q6UX34 121 aa7.21□□□□□ -1.26
NEDD9-209ENST00000504634 A0A1B0GW15 77 aa7.2□□□□□ -1.26
NEDD9-209ENST00000504634 RAB5AP20339 215 aa7.2□□□□□ -1.26
NEDD9-209ENST00000504634 ADIRFQ15847 76 aa7.2□□□□□ -1.26
NEDD9-209ENST00000504634 F8W036 122 aa7.19□□□□□ -1.26
NEDD9-209ENST00000504634 NUPR1O60356 82 aa7.19□□□□□ -1.26
NEDD9-209ENST00000504634 NPYP01303 97 aa7.19□□□□□ -1.26
NEDD9-209ENST00000504634 S100A8P05109 93 aa7.19□□□□□ -1.26
NEDD9-209ENST00000504634 PRSS2P07478 247 aa7.19□□□□□ -1.26
NEDD9-209ENST00000504634 LINC00242Q5T6M2 205 aa7.19□□□□□ -1.26
NEDD9-209ENST00000504634 SMIM27A0A1W2PRY6 76 aa7.18□□□□□ -1.26
NEDD9-209ENST00000504634 CKS1BP61024 79 aa7.18□□□□□ -1.26
NEDD9-209ENST00000504634 RPL23P62829 140 aaKnown RBP7.18□□□□□ -1.26
NEDD9-209ENST00000504634 LBHQ53QV2 105 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-209ENST00000504634 C2orf88Q9BSF0 95 aa7.18□□□□□ -1.26
NEDD9-209ENST00000504634 CTDSP1Q9GZU7 261 aa7.18□□□□□ -1.26
NEDD9-209ENST00000504634 IGLV4-3A0A075B6K6 122 aa7.17□□□□□ -1.26
NEDD9-209ENST00000504634 PPBPP02775 128 aa7.17□□□□□ -1.26
NEDD9-209ENST00000504634 MRPL54Q6P161 138 aaKnown RBP7.17□□□□□ -1.26
NEDD9-209ENST00000504634 TEX43Q6ZNM6 134 aa7.17□□□□□ -1.26
NEDD9-209ENST00000504634 LINC00469Q8N7U9 141 aa7.17□□□□□ -1.26
NEDD9-209ENST00000504634 TMEM141Q96I45 108 aa7.17□□□□□ -1.26
NEDD9-209ENST00000504634 TOMM7Q9P0U1 55 aa7.17□□□□□ -1.26
NEDD9-209ENST00000504634 PYGO1Q9Y3Y4 419 aa7.17□□□□□ -1.26
NEDD9-209ENST00000504634 C22orf24Q9Y442 160 aa7.17□□□□□ -1.26
NEDD9-209ENST00000504634 RPL28P46779 137 aaKnown RBP7.16□□□□□ -1.26
NEDD9-209ENST00000504634 C6orf226Q5I0X4 101 aa7.16□□□□□ -1.26
NEDD9-209ENST00000504634 TYMSOSQ8TAI1 123 aa7.16□□□□□ -1.26
NEDD9-209ENST00000504634 XAGE1AQ9HD64 81 aa7.16□□□□□ -1.26
NEDD9-209ENST00000504634 NAT8Q9UHE5 227 aa7.16□□□□□ -1.26
NEDD9-209ENST00000504634 CRYGAP11844 174 aa7.15□□□□□ -1.26
NEDD9-209ENST00000504634 NDUFA5Q16718 116 aa7.15□□□□□ -1.26
NEDD9-209ENST00000504634 Q6ZN92 141 aa7.15□□□□□ -1.26
NEDD9-209ENST00000504634 TMEM136Q6ZRR5 245 aa7.15□□□□□ -1.26
NEDD9-209ENST00000504634 ORMDL3Q8N138 153 aa7.15□□□□□ -1.26
NEDD9-209ENST00000504634 LINC01561Q8N1V8 128 aa7.15□□□□□ -1.26
NEDD9-209ENST00000504634 A0A087X002 238 aa7.14□□□□□ -1.27
NEDD9-209ENST00000504634 RAB14P61106 215 aa7.14□□□□□ -1.27
NEDD9-209ENST00000504634 PRELID3AQ96N28 172 aa7.14□□□□□ -1.27
NEDD9-209ENST00000504634 ALKBH7Q9BT30 221 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-209ENST00000504634 LOC389332A0A1B0GUA5 103 aa7.13□□□□□ -1.27
NEDD9-209ENST00000504634 BCE1O60756 84 aa7.13□□□□□ -1.27
NEDD9-209ENST00000504634 LCE2AQ5TA79 106 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-209ENST00000504634 MRPL55Q7Z7F7 128 aaKnown RBP7.13□□□□□ -1.27
NEDD9-209ENST00000504634 VCX2Q9H322 139 aa7.13□□□□□ -1.27
NEDD9-209ENST00000504634 A0A1B0GXF2 115 aa7.12□□□□□ -1.27
NEDD9-209ENST00000504634 IFITM2Q01629 132 aa7.12□□□□□ -1.27
NEDD9-209ENST00000504634 ZC2HC1BQ5TFG8 222 aa7.12□□□□□ -1.27
NEDD9-209ENST00000504634 CYSLTR1Q9Y271 337 aa7.12□□□□□ -1.27
NEDD9-209ENST00000504634 CLLU1Q5K131 121 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms