RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 NHP2Q9NX24 153 aaKnown RBP2.65□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TIMM9Q9Y5J7 89 aa2.65□□□□□ -1.99
PDLIM1P4-201ENST00000504327 EPPK1P58107 5090 aaKnown RBP2.65□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TRAV30A0A087WSZ9 112 aa2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 PLXNB1O43157 2135 aa2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SAA2P0DJI9 122 aaPredicted RBP2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TPT1P13693 172 aaKnown RBP2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 HIST1H1BP16401 226 aaKnown RBP2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 UBA52P62987 128 aaKnown RBP2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SUPT4H1P63272 117 aaKnown RBP2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 MRPS36P82909 103 aaKnown RBP2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 NDPQ00604 133 aa2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 EBI3Q14213 229 aa2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 FAM229BQ4G0N7 80 aa2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 DIRC1Q969H9 104 aa2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 NAA38Q9BRA0 125 aaKnown RBP2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 LINC00467Q9BRT7 94 aa2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 FXYD6Q9H0Q3 95 aa2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TRRAPQ9Y4A5 3859 aa2.64□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TNCP24821 2201 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 HMSDA8MTL9 139 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 HBDP02042 147 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TRGC1P0CF51 173 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 ZNF705BP0CI00 300 aaPredicted RBP2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 PYYP10082 97 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SLC25A4P12235 298 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 FUSP35637 526 aaKnown RBP eCLIP2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 FXYD2P54710 66 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 EIF4EBP1Q13541 118 aaPredicted RBP2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 ZNF345Q14585 488 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 NMSQ5H8A3 153 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 C3orf56Q8N813 242 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 OR2T35Q8NGX2 323 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 COPS9Q8WXC6 57 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 LEAP2Q969E1 77 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TMEM14BQ9NUH8 114 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 BET1LQ9NYM9 111 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 KIF25-AS1Q9Y6Z4 181 aa2.63□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TRAV7A0A075B6U4 112 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 H3BUX3 64 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 CCL25O15444 150 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TIMM17BO60830 172 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SNCAP37840 140 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TPPP2P59282 170 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TMEM258P61165 79 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 ERHP84090 104 aaKnown RBP2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 PLGLAQ15195 96 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 LY6EQ16553 131 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 RPL39P5Q59GN2 51 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 LYZL1Q6UWQ5 148 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 PATE2Q6UY27 113 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 KCNRGQ8N5I3 272 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 C1orf64Q8NEQ6 169 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 PPP1R1CQ8WVI7 109 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 NABP2Q9BQ15 211 aa2.62□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TRBV10-2A0A0K0K1G8 114 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 CEBPZOSA8MTT3 80 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 FNDC10F2Z333 226 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 PANO1I0J062 215 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SYNGR2O43760 224 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 PITX3O75364 302 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 MPC2O95563 127 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 MDKP21741 143 aaPredicted RBP2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 S100A10P60903 97 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SNRPD3P62318 126 aaKnown RBP2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 C2orf83Q53S99 150 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 LINC01545Q5VT33 79 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 Q8NDZ9 215 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TMEM167AQ8TBQ9 72 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 DPH3Q96FX2 82 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 AQP10Q96PS8 301 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 HILPDAQ9Y5L2 63 aa2.61□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TRBV20-1A0A075B6N2 111 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 FXYD6-FXYD2A0A087WZ82 144 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 A0A1B0GVG6 124 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 KANTRA0A1W2PQU2 76 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 CLPSL1A2RUU4 121 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 C16orf90A8MZG2 172 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 UMAD1C9J7I0 102 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 H3BUA1 57 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 H7C2G1 150 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 NDUFA3O95167 84 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 CFDP00746 253 aaPredicted RBP2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SAA1P0DJI8 122 aaPredicted RBP2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 FABP4P15090 132 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 BLCAPP62952 87 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 PRCDQ00LT1 54 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 Q8N2B8 174 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 Q8N6K4 173 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 CHCHD1Q96BP2 118 aaKnown RBP2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SLC35B3Q9H1N7 401 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 NDUFA4L2Q9NRX3 87 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 PSENENQ9NZ42 101 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 METTL1Q9UBP6 276 aaKnown RBP2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 S4R3C0 116 aa2.6□□□□□ -1.99
PDLIM1P4-201ENST00000504327 CMYA5Q8N3K9 4069 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 TRAV12-2A0A075B6T6 113 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 A0A1B0GU33 70 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 C11orf86A6NJI1 115 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms