RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PGLYRP4Q96LB8 373 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 MAP1LC3BQ9GZQ8 125 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 RPP21Q9H633 154 aaKnown RBP2.1□□□□□ -2.07
USP46-205ENST00000504078 ZFP30Q9Y2G7 519 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 TRAV13-1A0A0B4J241 112 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 CTXND1A0A1B0GTU2 59 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 PCP4L1A6NKN8 68 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 COX7A2LO14548 114 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 CXCL1P09341 107 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 FHITP49789 147 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 FOXA3P55318 350 aaPredicted RBP2.09□□□□□ -2.07
USP46-205ENST00000504078 SS18Q15532 418 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 TPRXLQ17RH7 258 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 KRTAP13-2Q52LG2 175 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 LINC00242Q5T6M2 205 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 RPL7L1Q6DKI1 246 aaKnown RBP2.09□□□□□ -2.07
USP46-205ENST00000504078 LINC00173Q6ZV60 143 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 COX8CQ7Z4L0 72 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 BAGE2Q86Y30 109 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 BOD1L2Q8IYS8 172 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 LINC01561Q8N1V8 128 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 GATD1Q8NB37 220 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 OR2D3Q8NGH3 330 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 ORAOV1Q8WV07 137 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 HIST1H2BAQ96A08 127 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 ISOC2Q96AB3 205 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 BTF3L4Q96K17 158 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 PSMG3Q9BT73 122 aaPredicted RBP2.09□□□□□ -2.07
USP46-205ENST00000504078 RNASE7Q9H1E1 156 aaKnown RBP2.09□□□□□ -2.07
USP46-205ENST00000504078 NIT2Q9NQR4 276 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 C6orf48Q9UBA6 75 aa2.09□□□□□ -2.07
USP46-205ENST00000504078 FXYD6-FXYD2A0A087WZ82 144 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 RAB19A4D1S5 217 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 C19orf71A6NCJ1 209 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 SDHAF1A6NFY7 115 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 NCR2O95944 276 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 TSHBP01222 138 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 TRGC1P0CF51 173 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 IGLC6P0CF74 106 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 RGS21Q2M5E4 152 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 CNPY1Q3B7I2 92 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 CENPWQ5EE01 88 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 AKR1C8PQ5T2L2 129 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 LYZL1Q6UWQ5 148 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 UNQ6190/PRO20217Q6UXQ8 127 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 LINC00304Q8N9R0 145 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 MRAP2Q96G30 205 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 TMEM101Q96IK0 257 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 MAP1LC3CQ9BXW4 147 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 PPDPFQ9H3Y8 114 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 ALG5Q9Y673 324 aa2.08□□□□□ -2.08
USP46-205ENST00000504078 SMKR1H3BMG3 65 aa2.07□□□□□ -2.08
USP46-205ENST00000504078 ZNF861PO60384 105 aa2.07□□□□□ -2.08
USP46-205ENST00000504078 PFDN1O60925 122 aa2.07□□□□□ -2.08
USP46-205ENST00000504078 ZNF25P17030 456 aaPredicted RBP2.07□□□□□ -2.08
USP46-205ENST00000504078 PMCHP20382 165 aa2.07□□□□□ -2.08
USP46-205ENST00000504078 RPL35P42766 123 aaKnown RBP2.07□□□□□ -2.08
USP46-205ENST00000504078 MT1HP80294 61 aa2.07□□□□□ -2.08
USP46-205ENST00000504078 Q5BKY6 102 aa2.07□□□□□ -2.08
USP46-205ENST00000504078 C9orf129Q5T035 196 aaKnown RBP2.07□□□□□ -2.08
USP46-205ENST00000504078 C2orf82Q6UX34 121 aa2.07□□□□□ -2.08
USP46-205ENST00000504078 C3orf22Q8N5N4 141 aa2.07□□□□□ -2.08
USP46-205ENST00000504078 FAM213BQ8TBF2 198 aa2.07□□□□□ -2.08
USP46-205ENST00000504078 SMDT1Q9H4I9 107 aa2.07□□□□□ -2.08
USP46-205ENST00000504078 C7orf77A4D0Y5 90 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 RPL37AP8A6NKH3 93 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 NDUFA1O15239 70 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 CTRLP40313 264 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 SERF2P84101 59 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 IFITM3Q01628 133 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 FAM74A3Q4VXF1 159 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 C5orf47Q569G3 176 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 TSKUQ8WUA8 353 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 C2orf48Q96LS8 159 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 CCDC32Q9BV29 185 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 MED28Q9H204 178 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 XAGE1AQ9HD64 81 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 CDC42SE2Q9NRR3 84 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 TNFSF18Q9UNG2 199 aa2.06□□□□□ -2.08
USP46-205ENST00000504078 CARHSP1Q9Y2V2 147 aaKnown RBP2.06□□□□□ -2.08
USP46-205ENST00000504078 BORCS7-ASMTA0A0B4J1R7 106 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 G3V3Q6 166 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 I3L3M4 83 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 SCO1O75880 301 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 IFNA1P01562 189 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 ESDP10768 282 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 PRLHP81277 87 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 VAMP3Q15836 100 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 KRTAP19-2Q3LHN2 52 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 ASB16-AS1Q495Z4 193 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 LINC00337Q8N6G1 96 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 SFT2D1Q8WV19 159 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 NKX6-2Q9C056 277 aaPredicted RBP2.05□□□□□ -2.08
USP46-205ENST00000504078 MRPL35Q9NZE8 188 aaKnown RBP2.05□□□□□ -2.08
USP46-205ENST00000504078 GNG13Q9P2W3 67 aa2.05□□□□□ -2.08
USP46-205ENST00000504078 TRBV20OR9-2A0A075B6H5 130 aa2.04□□□□□ -2.08
USP46-205ENST00000504078 IGKV2D-26A0A0A0MRZ7 120 aa2.04□□□□□ -2.08
USP46-205ENST00000504078 IFITM10A6NMD0 228 aa2.04□□□□□ -2.08
USP46-205ENST00000504078 C1orf196B1AJZ1 125 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms