RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
NFKB1-204ENST00000504044 C2orf66Q6UXQ4 117 aa11.45□□□□□ -0.58
NFKB1-204ENST00000504044 C5orf38Q86SI9 138 aa11.45□□□□□ -0.58
NFKB1-204ENST00000504044 OR10D4PQ8NGN7 298 aa11.45□□□□□ -0.58
NFKB1-204ENST00000504044 CAMK2N2Q96S95 79 aa11.45□□□□□ -0.58
NFKB1-204ENST00000504044 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
NFKB1-204ENST00000504044 F8WDY8 70 aa11.44□□□□□ -0.58
NFKB1-204ENST00000504044 MT-ND6P03923 174 aa11.44□□□□□ -0.58
NFKB1-204ENST00000504044 C7orf33Q8WU49 177 aa11.44□□□□□ -0.58
NFKB1-204ENST00000504044 C2orf48Q96LS8 159 aa11.44□□□□□ -0.58
NFKB1-204ENST00000504044 GNB1LQ9BYB4 327 aa11.44□□□□□ -0.58
NFKB1-204ENST00000504044 RPS10P5Q9NQ39 176 aa11.44□□□□□ -0.58
NFKB1-204ENST00000504044 CARHSP1Q9Y2V2 147 aaKnown RBP11.44□□□□□ -0.58
NFKB1-204ENST00000504044 A0A087WYN8 130 aa11.43□□□□□ -0.58
NFKB1-204ENST00000504044 IGKV2-24A0A0C4DH68 120 aa11.43□□□□□ -0.58
NFKB1-204ENST00000504044 CHTF8P0CG12 524 aa11.43□□□□□ -0.58
NFKB1-204ENST00000504044 SPAG11BQ08648 103 aa11.43□□□□□ -0.58
NFKB1-204ENST00000504044 PRSS3P2Q8NHM4 247 aa11.43□□□□□ -0.58
NFKB1-204ENST00000504044 OPRPNQ99935 248 aaPredicted RBP11.43□□□□□ -0.58
NFKB1-204ENST00000504044 IGLV4-3A0A075B6K6 122 aa11.42□□□□□ -0.58
NFKB1-204ENST00000504044 LINC01549A6NIU2 74 aa11.42□□□□□ -0.58
NFKB1-204ENST00000504044 C10orf91Q5T1B1 145 aa11.42□□□□□ -0.58
NFKB1-204ENST00000504044 LINC00526Q96FQ7 95 aa11.42□□□□□ -0.58
NFKB1-204ENST00000504044 VCX2Q9H322 139 aa11.42□□□□□ -0.58
NFKB1-204ENST00000504044 LOC107984640A0A0U1RRK4 108 aa11.41□□□□□ -0.58
NFKB1-204ENST00000504044 PANO1I0J062 215 aa11.41□□□□□ -0.58
NFKB1-204ENST00000504044 PLAC8Q9NZF1 115 aa11.41□□□□□ -0.58
NFKB1-204ENST00000504044 IGHV3OR16-9A0A0B4J2B5 98 aa11.4□□□□□ -0.58
NFKB1-204ENST00000504044 J3QL48 77 aa11.4□□□□□ -0.58
NFKB1-204ENST00000504044 SEC11AP67812 179 aa11.4□□□□□ -0.58
NFKB1-204ENST00000504044 KIAA1644Q3SXP7 199 aa11.4□□□□□ -0.58
NFKB1-204ENST00000504044 STPG4Q8N801 248 aa11.4□□□□□ -0.58
NFKB1-204ENST00000504044 ORAOV1Q8WV07 137 aa11.4□□□□□ -0.58
NFKB1-204ENST00000504044 A0A096LNI7 61 aa11.38□□□□□ -0.59
NFKB1-204ENST00000504044 NDUFA1O15239 70 aa11.38□□□□□ -0.59
NFKB1-204ENST00000504044 SNAPINO95295 136 aa11.38□□□□□ -0.59
NFKB1-204ENST00000504044 RNF151Q2KHN1 245 aa11.38□□□□□ -0.59
NFKB1-204ENST00000504044 Q6ZRU5 148 aa11.38□□□□□ -0.59
NFKB1-204ENST00000504044 SVBPQ8N300 66 aa11.38□□□□□ -0.59
NFKB1-204ENST00000504044 FAM104AQ969W3 186 aa11.38□□□□□ -0.59
NFKB1-204ENST00000504044 DNAH8Q96JB1 4490 aa11.38□□□□□ -0.59
NFKB1-204ENST00000504044 FABP9Q0Z7S8 132 aa11.37□□□□□ -0.59
NFKB1-204ENST00000504044 TIMM17AQ99595 171 aa11.37□□□□□ -0.59
NFKB1-204ENST00000504044 SMCO4Q9NRQ5 59 aa11.37□□□□□ -0.59
NFKB1-204ENST00000504044 A0A087WZ39 114 aa11.36□□□□□ -0.59
NFKB1-204ENST00000504044 APOC3P02656 99 aa11.36□□□□□ -0.59
NFKB1-204ENST00000504044 LINC00242Q5T6M2 205 aa11.36□□□□□ -0.59
NFKB1-204ENST00000504044 LINC01561Q8N1V8 128 aa11.36□□□□□ -0.59
NFKB1-204ENST00000504044 MRPL18Q9H0U6 180 aaKnown RBP11.36□□□□□ -0.59
NFKB1-204ENST00000504044 FAT1Q14517 4588 aa11.36□□□□□ -0.59
NFKB1-204ENST00000504044 VPS13BQ7Z7G8 4022 aa11.35□□□□□ -0.59
NFKB1-204ENST00000504044 UBE2D1P51668 147 aa11.35□□□□□ -0.59
NFKB1-204ENST00000504044 PTTG1IPP53801 180 aa11.35□□□□□ -0.59
NFKB1-204ENST00000504044 GAGE2BQ13066 116 aa11.35□□□□□ -0.59
NFKB1-204ENST00000504044 FA2HQ7L5A8 372 aa11.35□□□□□ -0.59
NFKB1-204ENST00000504044 TOMM6Q96B49 74 aa11.35□□□□□ -0.59
NFKB1-204ENST00000504044 AMELXQ99217 191 aa11.35□□□□□ -0.59
NFKB1-204ENST00000504044 ALKBH7Q9BT30 221 aaPredicted RBP11.35□□□□□ -0.59
NFKB1-204ENST00000504044 MRPL35Q9NZE8 188 aaKnown RBP11.35□□□□□ -0.59
NFKB1-204ENST00000504044 IGIPA6NJ69 53 aa11.34□□□□□ -0.59
NFKB1-204ENST00000504044 RPL18AQ02543 176 aaKnown RBP11.34□□□□□ -0.59
NFKB1-204ENST00000504044 SCGB3A1Q96QR1 104 aa11.34□□□□□ -0.59
NFKB1-204ENST00000504044 KRTAP29-1A8MX34 341 aaPredicted RBP11.33□□□□□ -0.6
NFKB1-204ENST00000504044 KRTAP10-4P60372 401 aaPredicted RBP11.33□□□□□ -0.6
NFKB1-204ENST00000504044 HERVK_113P63121 156 aa11.33□□□□□ -0.6
NFKB1-204ENST00000504044 ERASQ7Z444 233 aa11.33□□□□□ -0.6
NFKB1-204ENST00000504044 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
NFKB1-204ENST00000504044 OXTP01178 125 aa11.32□□□□□ -0.6
NFKB1-204ENST00000504044 PRSS2P07478 247 aa11.32□□□□□ -0.6
NFKB1-204ENST00000504044 PACRGQ96M98 296 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-204ENST00000504044 SRRM2Q9UQ35 2752 aaKnown RBP11.32□□□□□ -0.6
NFKB1-204ENST00000504044 TRAPPC1Q9Y5R8 145 aa11.31□□□□□ -0.6
NFKB1-204ENST00000504044 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-204ENST00000504044 FAM19A3Q7Z5A8 133 aa11.3□□□□□ -0.6
NFKB1-204ENST00000504044 LINC01546A6NGU7 62 aa11.29□□□□□ -0.6
NFKB1-204ENST00000504044 LINC00173Q6ZV60 143 aa11.29□□□□□ -0.6
NFKB1-204ENST00000504044 TRBV30A0A0K0K1B3 111 aa11.28□□□□□ -0.6
NFKB1-204ENST00000504044 CKS1BP61024 79 aa11.28□□□□□ -0.6
NFKB1-204ENST00000504044 RAB5BP61020 215 aa11.27□□□□□ -0.61
NFKB1-204ENST00000504044 TLX1NBP0CAT3 122 aa11.26□□□□□ -0.61
NFKB1-204ENST00000504044 C6orf226Q5I0X4 101 aa11.26□□□□□ -0.61
NFKB1-204ENST00000504044 ZC2HC1BQ5TFG8 222 aa11.26□□□□□ -0.61
NFKB1-204ENST00000504044 UNQ6190/PRO20217Q6UXQ8 127 aa11.26□□□□□ -0.61
NFKB1-204ENST00000504044 TOMM7Q9P0U1 55 aa11.26□□□□□ -0.61
NFKB1-204ENST00000504044 FLG2Q5D862 2391 aaPredicted RBP11.26□□□□□ -0.61
NFKB1-204ENST00000504044 A0A0J9YXV3 536 aa11.25□□□□□ -0.61
NFKB1-204ENST00000504044 Q6ZRP5 223 aa11.25□□□□□ -0.61
NFKB1-204ENST00000504044 Q8IZM0 81 aa11.25□□□□□ -0.61
NFKB1-204ENST00000504044 CXCL5P42830 114 aa11.24□□□□□ -0.61
NFKB1-204ENST00000504044 KIAA0087Q14695 138 aa11.24□□□□□ -0.61
NFKB1-204ENST00000504044 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-204ENST00000504044 LINC00469Q8N7U9 141 aa11.24□□□□□ -0.61
NFKB1-204ENST00000504044 C6orf48Q9UBA6 75 aa11.24□□□□□ -0.61
NFKB1-204ENST00000504044 TINCRA0A1B0GVN0 87 aa11.23□□□□□ -0.61
NFKB1-204ENST00000504044 LINC00614P0C842 121 aa11.23□□□□□ -0.61
NFKB1-204ENST00000504044 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
NFKB1-204ENST00000504044 PMVKQ15126 192 aa11.23□□□□□ -0.61
NFKB1-204ENST00000504044 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
NFKB1-204ENST00000504044 CDKN2A-AS1Q9UH64 79 aa11.22□□□□□ -0.61
NFKB1-204ENST00000504044 DMBT1Q9UGM3 2413 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms