RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 CSPG4Q6UVK1 2322 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 TRBV20OR9-2A0A075B6H5 130 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 IGKV1D-43A0A0B4J1Z2 117 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 IGHV1-18A0A0C4DH31 117 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 TRBV27A0A0K0K1C4 114 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 A8MUN3 132 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 DEFB108AA8MXU0 73 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 TMEM256-PLSCR3K7ERE1 68 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 INAFM2P0DMQ5 153 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 CCL8P80075 99 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 KRTAP13-3Q3SY46 172 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 MIC13Q5XKP0 118 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 C2orf50Q96LR7 162 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 NXT2Q9NPJ8 142 aaKnown RBP2.68□□□□□ -1.98
SCLT1-206ENST00000503565 CMC2Q9NRP2 79 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 TP73-AS1Q9UF72 201 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 TACC2O95359 2948 aa2.68□□□□□ -1.98
SCLT1-206ENST00000503565 PRR14LQ5THK1 2151 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 DCHS2Q6V1P9 2916 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 ACANP16112 2415 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 ROS1P08922 2347 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 IGKV1D-37A0A075B6S9 117 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 UBE2L5PA0A1B0GUS4 154 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 K7ERJ3 54 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 SH2D1AO60880 128 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 PRB2P02812 416 aaPredicted RBP2.67□□□□□ -1.98
SCLT1-206ENST00000503565 KRTAP10-8P60410 259 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 HBBP68871 147 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 ZFAND2AQ8N6M9 145 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 CLDND2Q8NHS1 167 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 TOMM6Q96B49 74 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 CCL19Q99731 98 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 UPK3BQ9BT76 320 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 JMJD1CQ15652 2540 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 AKAP6Q13023 2319 aa2.67□□□□□ -1.98
SCLT1-206ENST00000503565 CADP27708 2225 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 ZNF469Q96JG9 3925 aaPredicted RBP2.66□□□□□ -1.98
SCLT1-206ENST00000503565 A6NIN4 97 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 C2orf70A6NJV1 201 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 E7EQL1 145 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 COX7A2LO14548 114 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 TIMM17BO60830 172 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 IGHV3-53P01767 116 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 RPS27P42677 84 aaKnown RBP2.66□□□□□ -1.98
SCLT1-206ENST00000503565 ZNF80P51504 273 aaPredicted RBP2.66□□□□□ -1.98
SCLT1-206ENST00000503565 ATP5EP56381 51 aaPredicted RBP2.66□□□□□ -1.98
SCLT1-206ENST00000503565 SNRPGP62308 76 aaKnown RBP2.66□□□□□ -1.98
SCLT1-206ENST00000503565 SSBP1Q04837 148 aaKnown RBP2.66□□□□□ -1.98
SCLT1-206ENST00000503565 SS18Q15532 418 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 PSMG4Q5JS54 123 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 C12orf73Q69YU5 71 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 SERP2Q8N6R1 65 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 TSKUQ8WUA8 353 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 SPTSSAQ969W0 71 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 CCL13Q99616 98 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 DYNLRB1Q9NP97 96 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 HIGD1BQ9P298 99 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 LHFPL6Q9Y693 200 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 RTTNQ86VV8 2226 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 FN1P02751 2386 aaKnown RBP2.66□□□□□ -1.98
SCLT1-206ENST00000503565 DSCAMO60469 2012 aa2.66□□□□□ -1.98
SCLT1-206ENST00000503565 STAB1Q9NY15 2570 aa2.65□□□□□ -1.98
SCLT1-206ENST00000503565 F2Z2F3 143 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 M0R135 149 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 HBDP02042 147 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 EFNA4P52798 201 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 FGF12P61328 243 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 HIST1H4AP62805 103 aaKnown RBP2.65□□□□□ -1.99
SCLT1-206ENST00000503565 INSL4Q14641 139 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 DEFB113Q30KQ7 82 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 LINC01590Q5TEZ4 76 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 PHF5AQ7RTV0 110 aaKnown RBP2.65□□□□□ -1.99
SCLT1-206ENST00000503565 C6orf201Q7Z4U5 140 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 C5orf38Q86SI9 138 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 H1FXQ92522 213 aaKnown RBP2.65□□□□□ -1.99
SCLT1-206ENST00000503565 TRGV9Q99603 122 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 SMIM7Q9BQ49 75 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 TTTY10Q9BZA0 68 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 EPDR1Q9UM22 224 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 PLCE1Q9P212 2302 aa2.65□□□□□ -1.99
SCLT1-206ENST00000503565 NSD1Q96L73 2696 aaPredicted RBP2.65□□□□□ -1.99
SCLT1-206ENST00000503565 IGHV1-24A0A0C4DH33 117 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 SLC25A20O43772 301 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 DYNLT3P51808 116 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 UBE2BP63146 152 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 CCL20P78556 96 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 TMEM155Q4W5P6 130 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 TMEM170BQ5T4T1 132 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 LYZL2Q7Z4W2 148 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 Q8N2B8 174 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 Q8N8P6 123 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 LINC01600Q96MT4 127 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 CYSTM1Q9H1C7 97 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 NHP2Q9NX24 153 aaKnown RBP2.64□□□□□ -1.99
SCLT1-206ENST00000503565 GNG13Q9P2W3 67 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 R4GN34 69 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 COL6A5A8TX70 2615 aa2.64□□□□□ -1.99
SCLT1-206ENST00000503565 FLNAP21333 2647 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms