RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 TIMM17AQ99595 171 aa11.74□□□□□ -0.53
PDLIM7-209ENST00000503346 PCLOQ9Y6V0 5065 aa11.74□□□□□ -0.53
PDLIM7-209ENST00000503346 C5orf38Q86SI9 138 aa11.73□□□□□ -0.53
PDLIM7-209ENST00000503346 CHAC1Q9BUX1 264 aa11.73□□□□□ -0.53
PDLIM7-209ENST00000503346 KRTAP4-5Q9BYR2 181 aa11.73□□□□□ -0.53
PDLIM7-209ENST00000503346 VCX2Q9H322 139 aa11.73□□□□□ -0.53
PDLIM7-209ENST00000503346 IGHV3-64A0A075B6Q5 118 aa11.72□□□□□ -0.53
PDLIM7-209ENST00000503346 LINC01549A6NIU2 74 aa11.72□□□□□ -0.53
PDLIM7-209ENST00000503346 UBE2D1P51668 147 aa11.72□□□□□ -0.53
PDLIM7-209ENST00000503346 PAPPA-AS1Q5QFB9 102 aa11.72□□□□□ -0.53
PDLIM7-209ENST00000503346 LINC00173Q6ZV60 143 aa11.72□□□□□ -0.53
PDLIM7-209ENST00000503346 C18orf32Q8TCD1 76 aa11.72□□□□□ -0.53
PDLIM7-209ENST00000503346 C2orf88Q9BSF0 95 aa11.72□□□□□ -0.53
PDLIM7-209ENST00000503346 ZNF561-AS1K7EIQ3 104 aa11.71□□□□□ -0.53
PDLIM7-209ENST00000503346 APOMO95445 188 aa11.71□□□□□ -0.53
PDLIM7-209ENST00000503346 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
PDLIM7-209ENST00000503346 SCXQ7RTU7 201 aa11.71□□□□□ -0.53
PDLIM7-209ENST00000503346 ERASQ7Z444 233 aa11.71□□□□□ -0.53
PDLIM7-209ENST00000503346 ZC2HC1BQ5TFG8 222 aa11.7□□□□□ -0.54
PDLIM7-209ENST00000503346 LINC00526Q96FQ7 95 aa11.7□□□□□ -0.54
PDLIM7-209ENST00000503346 SCGB3A1Q96QR1 104 aa11.7□□□□□ -0.54
PDLIM7-209ENST00000503346 SMR3BP02814 79 aaPredicted RBP11.69□□□□□ -0.54
PDLIM7-209ENST00000503346 URB1-AS1Q96HZ7 61 aa11.69□□□□□ -0.54
PDLIM7-209ENST00000503346 EPM2AB3EWF7 344 aa11.68□□□□□ -0.54
PDLIM7-209ENST00000503346 LINC00614P0C842 121 aa11.68□□□□□ -0.54
PDLIM7-209ENST00000503346 COX6A2Q02221 97 aa11.68□□□□□ -0.54
PDLIM7-209ENST00000503346 FAM19A3Q7Z5A8 133 aa11.68□□□□□ -0.54
PDLIM7-209ENST00000503346 OR10D4PQ8NGN7 298 aa11.68□□□□□ -0.54
PDLIM7-209ENST00000503346 CIRBP-AS1Q8TBR5 109 aa11.68□□□□□ -0.54
PDLIM7-209ENST00000503346 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.68□□□□□ -0.54
PDLIM7-209ENST00000503346 IGLV4-69A0A075B6H9 119 aa11.67□□□□□ -0.54
PDLIM7-209ENST00000503346 A0A087WZ39 114 aa11.67□□□□□ -0.54
PDLIM7-209ENST00000503346 SYCNQ0VAF6 134 aa11.67□□□□□ -0.54
PDLIM7-209ENST00000503346 CIRBPQ14011 172 aaKnown RBP11.67□□□□□ -0.54
PDLIM7-209ENST00000503346 C2orf48Q96LS8 159 aa11.67□□□□□ -0.54
PDLIM7-209ENST00000503346 CARD19Q96LW7 228 aa11.67□□□□□ -0.54
PDLIM7-209ENST00000503346 PANO1I0J062 215 aa11.66□□□□□ -0.54
PDLIM7-209ENST00000503346 RAB5BP61020 215 aa11.66□□□□□ -0.54
PDLIM7-209ENST00000503346 SPAG11BQ08648 103 aa11.66□□□□□ -0.54
PDLIM7-209ENST00000503346 Q5VSD8 79 aa11.66□□□□□ -0.54
PDLIM7-209ENST00000503346 A0A096LNJ9 63 aa11.65□□□□□ -0.54
PDLIM7-209ENST00000503346 LINC01561Q8N1V8 128 aa11.65□□□□□ -0.54
PDLIM7-209ENST00000503346 ORAOV1Q8WV07 137 aa11.65□□□□□ -0.54
PDLIM7-209ENST00000503346 VPS13BQ7Z7G8 4022 aa11.64□□□□□ -0.55
PDLIM7-209ENST00000503346 FAM229AH3BQW9 127 aa11.64□□□□□ -0.55
PDLIM7-209ENST00000503346 SEC11AP67812 179 aa11.64□□□□□ -0.55
PDLIM7-209ENST00000503346 Q6ZRU5 148 aa11.63□□□□□ -0.55
PDLIM7-209ENST00000503346 SPACA4Q8TDM5 124 aa11.63□□□□□ -0.55
PDLIM7-209ENST00000503346 CAMK2N2Q96S95 79 aa11.63□□□□□ -0.55
PDLIM7-209ENST00000503346 PKIGQ9Y2B9 76 aa11.63□□□□□ -0.55
PDLIM7-209ENST00000503346 F8WDY8 70 aa11.62□□□□□ -0.55
PDLIM7-209ENST00000503346 HBDP02042 147 aa11.62□□□□□ -0.55
PDLIM7-209ENST00000503346 CHTF8P0CG12 524 aa11.62□□□□□ -0.55
PDLIM7-209ENST00000503346 HERVK_113P63121 156 aa11.62□□□□□ -0.55
PDLIM7-209ENST00000503346 COLCA2A8K830 154 aa11.61□□□□□ -0.55
PDLIM7-209ENST00000503346 LINC00528Q8N1L1 170 aa11.61□□□□□ -0.55
PDLIM7-209ENST00000503346 CST9LQ9H4G1 147 aa11.61□□□□□ -0.55
PDLIM7-209ENST00000503346 A0A0J9YXV3 536 aa11.6□□□□□ -0.55
PDLIM7-209ENST00000503346 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.6□□□□□ -0.55
PDLIM7-209ENST00000503346 TRGC2P03986 189 aa11.6□□□□□ -0.55
PDLIM7-209ENST00000503346 PMVKQ15126 192 aa11.6□□□□□ -0.55
PDLIM7-209ENST00000503346 PDZD11Q5EBL8 140 aa11.6□□□□□ -0.55
PDLIM7-209ENST00000503346 CHCHD1Q96BP2 118 aaKnown RBP11.6□□□□□ -0.55
PDLIM7-209ENST00000503346 KIAA0087Q14695 138 aa11.59□□□□□ -0.55
PDLIM7-209ENST00000503346 PMCHL1Q16048 86 aa11.59□□□□□ -0.55
PDLIM7-209ENST00000503346 RNF151Q2KHN1 245 aa11.59□□□□□ -0.55
PDLIM7-209ENST00000503346 GEMIN7Q9H840 131 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-209ENST00000503346 MRPL35Q9NZE8 188 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-209ENST00000503346 A0A096LNI7 61 aa11.58□□□□□ -0.56
PDLIM7-209ENST00000503346 TINCRA0A1B0GVN0 87 aa11.58□□□□□ -0.56
PDLIM7-209ENST00000503346 CDKN2A-AS1Q9UH64 79 aa11.58□□□□□ -0.56
PDLIM7-209ENST00000503346 A0A087WYN8 130 aa11.57□□□□□ -0.56
PDLIM7-209ENST00000503346 IGKV2-24A0A0C4DH68 120 aa11.57□□□□□ -0.56
PDLIM7-209ENST00000503346 NDUFA1O15239 70 aa11.57□□□□□ -0.56
PDLIM7-209ENST00000503346 DPH3Q96FX2 82 aa11.57□□□□□ -0.56
PDLIM7-209ENST00000503346 PLAC8Q9NZF1 115 aa11.57□□□□□ -0.56
PDLIM7-209ENST00000503346 LINC00474Q9P2X8 69 aa11.57□□□□□ -0.56
PDLIM7-209ENST00000503346 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
PDLIM7-209ENST00000503346 LOC107984640A0A0U1RRK4 108 aa11.56□□□□□ -0.56
PDLIM7-209ENST00000503346 ATP5LO75964 103 aa11.56□□□□□ -0.56
PDLIM7-209ENST00000503346 MAJINQ3KP22 176 aa11.56□□□□□ -0.56
PDLIM7-209ENST00000503346 PLA2G1BP04054 148 aaKnown RBP11.55□□□□□ -0.56
PDLIM7-209ENST00000503346 C10orf25Q5T742 122 aa11.55□□□□□ -0.56
PDLIM7-209ENST00000503346 SCO1O75880 301 aa11.54□□□□□ -0.56
PDLIM7-209ENST00000503346 PTTG1IPP53801 180 aa11.54□□□□□ -0.56
PDLIM7-209ENST00000503346 UNQ6190/PRO20217Q6UXQ8 127 aa11.54□□□□□ -0.56
PDLIM7-209ENST00000503346 BAGE3Q86Y29 109 aa11.54□□□□□ -0.56
PDLIM7-209ENST00000503346 LINC00469Q8N7U9 141 aa11.54□□□□□ -0.56
PDLIM7-209ENST00000503346 PACRGQ96M98 296 aaPredicted RBP11.54□□□□□ -0.56
PDLIM7-209ENST00000503346 Q8IZM0 81 aa11.53□□□□□ -0.56
PDLIM7-209ENST00000503346 C6orf48Q9UBA6 75 aa11.53□□□□□ -0.56
PDLIM7-209ENST00000503346 PRSS2P07478 247 aa11.52□□□□□ -0.57
PDLIM7-209ENST00000503346 IGLC3P0DOY3 106 aa11.52□□□□□ -0.57
PDLIM7-209ENST00000503346 STPG4Q8N801 248 aa11.52□□□□□ -0.57
PDLIM7-209ENST00000503346 TRBV30A0A0K0K1B3 111 aa11.51□□□□□ -0.57
PDLIM7-209ENST00000503346 SMIM1B2RUZ4 78 aa11.51□□□□□ -0.57
PDLIM7-209ENST00000503346 HSBP1O75506 76 aa11.51□□□□□ -0.57
PDLIM7-209ENST00000503346 TLX1NBP0CAT3 122 aa11.51□□□□□ -0.57
PDLIM7-209ENST00000503346 INAFM2P0DMQ5 153 aa11.51□□□□□ -0.57
PDLIM7-209ENST00000503346 NDUFA6P56556 154 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms