RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 LINC00242Q5T6M2 205 aa11.48□□□□□ -0.57
SMAD1-204ENST00000503324 Q6ZN92 141 aa11.48□□□□□ -0.57
SMAD1-204ENST00000503324 ERASQ7Z444 233 aa11.48□□□□□ -0.57
SMAD1-204ENST00000503324 C9orf163Q8N9P6 203 aa11.48□□□□□ -0.57
SMAD1-204ENST00000503324 LINC01549A6NIU2 74 aa11.47□□□□□ -0.57
SMAD1-204ENST00000503324 Q6ZSA8 131 aa11.47□□□□□ -0.57
SMAD1-204ENST00000503324 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
SMAD1-204ENST00000503324 SCGB3A1Q96QR1 104 aa11.47□□□□□ -0.57
SMAD1-204ENST00000503324 VCX2Q9H322 139 aa11.47□□□□□ -0.57
SMAD1-204ENST00000503324 C2orf88Q9BSF0 95 aa11.46□□□□□ -0.57
SMAD1-204ENST00000503324 KRTAP17-1Q9BYP8 105 aa11.46□□□□□ -0.57
SMAD1-204ENST00000503324 RAB5BP61020 215 aa11.45□□□□□ -0.58
SMAD1-204ENST00000503324 COX6A2Q02221 97 aa11.45□□□□□ -0.58
SMAD1-204ENST00000503324 MALP21145 153 aa11.44□□□□□ -0.58
SMAD1-204ENST00000503324 PAPPA-AS1Q5QFB9 102 aa11.44□□□□□ -0.58
SMAD1-204ENST00000503324 FAM19A3Q7Z5A8 133 aa11.44□□□□□ -0.58
SMAD1-204ENST00000503324 LINC00526Q96FQ7 95 aa11.44□□□□□ -0.58
SMAD1-204ENST00000503324 PMCHL1Q16048 86 aa11.43□□□□□ -0.58
SMAD1-204ENST00000503324 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.42□□□□□ -0.58
SMAD1-204ENST00000503324 HBDP02042 147 aa11.42□□□□□ -0.58
SMAD1-204ENST00000503324 HAMPP81172 84 aa11.42□□□□□ -0.58
SMAD1-204ENST00000503324 SDIM1Q6ZPB5 146 aa11.42□□□□□ -0.58
SMAD1-204ENST00000503324 FAT1Q14517 4588 aa11.42□□□□□ -0.58
SMAD1-204ENST00000503324 A0A087WZ39 114 aa11.41□□□□□ -0.58
SMAD1-204ENST00000503324 PDZD11Q5EBL8 140 aa11.41□□□□□ -0.58
SMAD1-204ENST00000503324 CHCHD1Q96BP2 118 aaKnown RBP11.41□□□□□ -0.58
SMAD1-204ENST00000503324 IGHV3-64A0A075B6Q5 118 aa11.4□□□□□ -0.58
SMAD1-204ENST00000503324 ZNF561-AS1K7EIQ3 104 aa11.4□□□□□ -0.58
SMAD1-204ENST00000503324 APOMO95445 188 aa11.4□□□□□ -0.58
SMAD1-204ENST00000503324 IGLV4-69A0A075B6H9 119 aa11.39□□□□□ -0.59
SMAD1-204ENST00000503324 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.39□□□□□ -0.59
SMAD1-204ENST00000503324 OR10D4PQ8NGN7 298 aa11.39□□□□□ -0.59
SMAD1-204ENST00000503324 CST9LQ9H4G1 147 aa11.39□□□□□ -0.59
SMAD1-204ENST00000503324 A0A0J9YXV3 536 aa11.38□□□□□ -0.59
SMAD1-204ENST00000503324 LINC00310P59036 64 aa11.38□□□□□ -0.59
SMAD1-204ENST00000503324 SPAG11BQ08648 103 aa11.38□□□□□ -0.59
SMAD1-204ENST00000503324 ORAOV1Q8WV07 137 aa11.38□□□□□ -0.59
SMAD1-204ENST00000503324 PANO1I0J062 215 aa11.37□□□□□ -0.59
SMAD1-204ENST00000503324 SEC11AP67812 179 aa11.37□□□□□ -0.59
SMAD1-204ENST00000503324 PMVKQ15126 192 aa11.37□□□□□ -0.59
SMAD1-204ENST00000503324 BAGE3Q86Y29 109 aa11.37□□□□□ -0.59
SMAD1-204ENST00000503324 LINC01561Q8N1V8 128 aa11.37□□□□□ -0.59
SMAD1-204ENST00000503324 C2orf48Q96LS8 159 aa11.37□□□□□ -0.59
SMAD1-204ENST00000503324 CARD19Q96LW7 228 aa11.37□□□□□ -0.59
SMAD1-204ENST00000503324 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.37□□□□□ -0.59
SMAD1-204ENST00000503324 HERVK_113P63121 156 aa11.36□□□□□ -0.59
SMAD1-204ENST00000503324 SYCNQ0VAF6 134 aa11.36□□□□□ -0.59
SMAD1-204ENST00000503324 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
SMAD1-204ENST00000503324 Q8N1X5 172 aa11.36□□□□□ -0.59
SMAD1-204ENST00000503324 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
SMAD1-204ENST00000503324 KIAA0087Q14695 138 aa11.35□□□□□ -0.59
SMAD1-204ENST00000503324 Q6ZRU5 148 aa11.35□□□□□ -0.59
SMAD1-204ENST00000503324 CDKN2A-AS1Q9UH64 79 aa11.35□□□□□ -0.59
SMAD1-204ENST00000503324 TINCRA0A1B0GVN0 87 aa11.34□□□□□ -0.59
SMAD1-204ENST00000503324 SERF1AO75920 110 aa11.34□□□□□ -0.59
SMAD1-204ENST00000503324 ATP5LO75964 103 aa11.34□□□□□ -0.59
SMAD1-204ENST00000503324 CIRBPQ14011 172 aaKnown RBP11.34□□□□□ -0.59
SMAD1-204ENST00000503324 CIRBP-AS1Q8TBR5 109 aa11.34□□□□□ -0.59
SMAD1-204ENST00000503324 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
SMAD1-204ENST00000503324 KRTAP4-5Q9BYR2 181 aa11.34□□□□□ -0.59
SMAD1-204ENST00000503324 GEMIN7Q9H840 131 aaKnown RBP11.34□□□□□ -0.59
SMAD1-204ENST00000503324 IGLV5-45A0A087WSX0 123 aa11.33□□□□□ -0.6
SMAD1-204ENST00000503324 ATP6V1G1O75348 118 aa11.33□□□□□ -0.6
SMAD1-204ENST00000503324 HSBP1O75506 76 aa11.33□□□□□ -0.6
SMAD1-204ENST00000503324 FAM19A2Q8N3H0 131 aa11.33□□□□□ -0.6
SMAD1-204ENST00000503324 NUPR1O60356 82 aa11.32□□□□□ -0.6
SMAD1-204ENST00000503324 SMR3BP02814 79 aaPredicted RBP11.32□□□□□ -0.6
SMAD1-204ENST00000503324 CHTF8P0CG12 524 aa11.32□□□□□ -0.6
SMAD1-204ENST00000503324 S100A1P23297 94 aa11.32□□□□□ -0.6
SMAD1-204ENST00000503324 F8WDY8 70 aa11.31□□□□□ -0.6
SMAD1-204ENST00000503324 IGLC3P0DOY3 106 aa11.31□□□□□ -0.6
SMAD1-204ENST00000503324 NDUFA6P56556 154 aa11.31□□□□□ -0.6
SMAD1-204ENST00000503324 LINC00469Q8N7U9 141 aa11.31□□□□□ -0.6
SMAD1-204ENST00000503324 ABCA13Q86UQ4 5058 aa11.31□□□□□ -0.6
SMAD1-204ENST00000503324 HIST1H2BKO60814 126 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 HIST1H2BJP06899 126 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 HIST1H2BOP23527 126 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 HIST1H2BBP33778 126 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 HIST1H2BDP58876 126 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 HIST1H2BCP62807 126 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 HIST2H2BEQ16778 126 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.3□□□□□ -0.6
SMAD1-204ENST00000503324 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 SPACA4Q8TDM5 124 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 HIST1H2BHQ93079 126 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 HIST1H2BNQ99877 126 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 HIST1H2BMQ99879 126 aa11.3□□□□□ -0.6
SMAD1-204ENST00000503324 A0A096LNI7 61 aa11.29□□□□□ -0.6
SMAD1-204ENST00000503324 RNF151Q2KHN1 245 aa11.29□□□□□ -0.6
SMAD1-204ENST00000503324 IFI27L1Q96BM0 104 aa11.29□□□□□ -0.6
SMAD1-204ENST00000503324 MRPL35Q9NZE8 188 aaKnown RBP11.29□□□□□ -0.6
SMAD1-204ENST00000503324 SMIM1B2RUZ4 78 aa11.28□□□□□ -0.6
SMAD1-204ENST00000503324 NDUFA1O15239 70 aa11.28□□□□□ -0.6
SMAD1-204ENST00000503324 UNQ6190/PRO20217Q6UXQ8 127 aa11.28□□□□□ -0.6
SMAD1-204ENST00000503324 C2orf82Q6UX34 121 aa11.27□□□□□ -0.61
SMAD1-204ENST00000503324 Q8IZM0 81 aa11.27□□□□□ -0.61
SMAD1-204ENST00000503324 PACRGQ96M98 296 aaPredicted RBP11.27□□□□□ -0.61
SMAD1-204ENST00000503324 C6orf48Q9UBA6 75 aa11.27□□□□□ -0.61
SMAD1-204ENST00000503324 IGKV2-24A0A0C4DH68 120 aa11.26□□□□□ -0.61
SMAD1-204ENST00000503324 Q5VSD8 79 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms