RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
RFC1-205ENST00000502991 CATR1Q13166 79 aa2.31□□□□□ -2.04
RFC1-205ENST00000502991 OR2T2Q6IF00 324 aa2.31□□□□□ -2.04
RFC1-205ENST00000502991 C6orf201Q7Z4U5 140 aa2.31□□□□□ -2.04
RFC1-205ENST00000502991 C5orf17Q8NAS9 161 aa2.31□□□□□ -2.04
RFC1-205ENST00000502991 OR10AG1Q8NH19 301 aa2.31□□□□□ -2.04
RFC1-205ENST00000502991 ATMQ13315 3056 aa2.31□□□□□ -2.04
RFC1-205ENST00000502991 BOD1L1Q8NFC6 3051 aa2.31□□□□□ -2.04
RFC1-205ENST00000502991 ESPL1Q14674 2120 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 PTPRQQ9UMZ3 2332 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 DSPP15924 2871 aaKnown RBP2.3□□□□□ -2.04
RFC1-205ENST00000502991 LAMA5O15230 3695 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 TRBV6-7A0A0A0MS04 114 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 SFT2D2O95562 160 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 IFNA17P01571 189 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 HSD52Q0P140 79 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 NCMAPQ5T1S8 102 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 FP248Q71RG6 208 aaPredicted RBP2.3□□□□□ -2.04
RFC1-205ENST00000502991 DYNLRB2Q8TF09 96 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 LSM10Q969L4 123 aaKnown RBP2.3□□□□□ -2.04
RFC1-205ENST00000502991 NMES1Q9C002 83 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 APC2O95996 2303 aa2.3□□□□□ -2.04
RFC1-205ENST00000502991 ANKRD11Q6UB99 2663 aaPredicted RBP2.29□□□□□ -2.04
RFC1-205ENST00000502991 TRAV2A0A0B4J234 112 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 TMEM30CPA0ZSE6 113 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 M0R143 59 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 PPYP01298 95 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 IGKV1-17P01599 117 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 SLC25A6P12236 298 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 PIGYQ3MUY2 71 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 Q6AWC8 147 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 MRPL54Q6P161 138 aaKnown RBP2.29□□□□□ -2.04
RFC1-205ENST00000502991 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.29□□□□□ -2.04
RFC1-205ENST00000502991 TXNDC17Q9BRA2 123 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 KAAG1Q9UBP8 84 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 CACFD1Q9UGQ2 172 aa2.29□□□□□ -2.04
RFC1-205ENST00000502991 SPTBN4Q9H254 2564 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 TRBV6-8A0A0A6YYG3 113 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 CRYM-AS1A6NIL9 109 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 F8W1H4 67 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 IGHV3-33P01772 117 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 COX7CP15954 63 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 HMGN3Q15651 99 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 LINC00052Q96N35 136 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 TMEM242Q9NWH2 141 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 ORMDL1Q9P0S3 153 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 CHD3Q12873 2000 aaKnown RBP2.28□□□□□ -2.04
RFC1-205ENST00000502991 PIEZO2Q9H5I5 2752 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 PIEZO1Q92508 2521 aa2.28□□□□□ -2.04
RFC1-205ENST00000502991 MAP1BP46821 2468 aaKnown RBP2.28□□□□□ -2.04
RFC1-205ENST00000502991 PCNX1Q96RV3 2341 aa2.27□□□□□ -2.05
RFC1-205ENST00000502991 IGKV1D-17A0A075B6S4 117 aa2.27□□□□□ -2.05
RFC1-205ENST00000502991 MPC2O95563 127 aa2.27□□□□□ -2.05
RFC1-205ENST00000502991 PKIAP61925 76 aa2.27□□□□□ -2.05
RFC1-205ENST00000502991 TFF3Q07654 80 aa2.27□□□□□ -2.05
RFC1-205ENST00000502991 C9orf62Q8N4C0 152 aa2.27□□□□□ -2.05
RFC1-205ENST00000502991 PPP1R1CQ8WVI7 109 aa2.27□□□□□ -2.05
RFC1-205ENST00000502991 LINC00526Q96FQ7 95 aa2.27□□□□□ -2.05
RFC1-205ENST00000502991 CADP27708 2225 aa2.27□□□□□ -2.05
RFC1-205ENST00000502991 SPTBN2O15020 2390 aa2.27□□□□□ -2.05
RFC1-205ENST00000502991 ICE1Q9Y2F5 2266 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 BSNQ9UPA5 3926 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 CEP295Q9C0D2 2601 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 MUC4Q99102 2169 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 RP1L1Q8IWN7 2480 aaPredicted RBP2.26□□□□□ -2.05
RFC1-205ENST00000502991 DOCK11Q5JSL3 2073 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 KANTRA0A1W2PQU2 76 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 DEFB108AA8MXU0 73 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 FXYD4P59646 89 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 CCL8P80075 99 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 Q5BKY6 102 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 C10orf55Q5SWW7 151 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 C9orf153Q5TBE3 101 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 HEPN1Q6WQI6 88 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 ZNF818PQ6ZRF7 136 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 AQP10Q96PS8 301 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 FXYD6Q9H0Q3 95 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 TMEM106BQ9NUM4 274 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 MED9Q9NWA0 146 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 LINC00312Q9Y6C7 94 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 ZZEF1O43149 2961 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 CACNA1AO00555 2505 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 TLN1Q9Y490 2541 aaKnown RBP2.26□□□□□ -2.05
RFC1-205ENST00000502991 ADGRG4Q8IZF6 3080 aa2.26□□□□□ -2.05
RFC1-205ENST00000502991 KALRNO60229 2985 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 PLCE1Q9P212 2302 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 NBEAQ8NFP9 2946 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 ARFGEF3Q5TH69 2177 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 FXYD6-FXYD2A0A087WZ82 144 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 SNCGO76070 127 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 SIX6O95475 246 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 RNASE3P12724 160 aaKnown RBP2.25□□□□□ -2.05
RFC1-205ENST00000502991 IFITM1P13164 125 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 UBA52P62987 128 aaKnown RBP2.25□□□□□ -2.05
RFC1-205ENST00000502991 RHOHQ15669 191 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 NMSQ5H8A3 153 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 SPANXN1Q5VSR9 72 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 SVBPQ8N300 66 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 GAFA1Q96PS6 74 aa2.25□□□□□ -2.05
RFC1-205ENST00000502991 DYNLRB1Q9NP97 96 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms