RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 GPHB5Q86YW7 130 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 WFDC3Q8IUB2 231 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 LINC00477Q96M19 166 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 AGPAT4-IT1Q9H0P7 198 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 C21orf62Q9NYP8 219 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 ICOSQ9Y6W8 199 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 PKHD1P08F94 4074 aa3.73□□□□□ -1.81
HTT-202ENST00000502820 DYNC1H1Q14204 4646 aaKnown RBP3.72□□□□□ -1.81
HTT-202ENST00000502820 HSPG2P98160 4391 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 IGLV4-69A0A075B6H9 119 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 TRGV11A0A075B6L2 103 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 TRBV7-1A0A0A6YYK4 115 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 TRBV27A0A0K0K1C4 114 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 FAM236AA0A1B0GUQ0 79 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 FAM236BA0A1B0GV22 79 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 A4D1N5 150 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 IGIPA6NJ69 53 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 H3BTX0 84 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 BCE1O60756 84 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 TRACP01848 142 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 ZNF22P17026 224 aaPredicted RBP3.72□□□□□ -1.81
HTT-202ENST00000502820 EMP1P54849 157 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 FXYD7P58549 80 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 DEFB114Q30KQ6 69 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 ATP5EP2Q5VTU8 51 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 GAGE2AQ6NT46 116 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 C5orf38Q86SI9 138 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 APRG1Q8IVJ8 170 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 SORL1Q92673 2214 aa3.72□□□□□ -1.81
HTT-202ENST00000502820 DNAH2Q9P225 4427 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 MUC4Q99102 2169 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 IGKV3D-20A0A0C4DH25 116 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 TMEM223A0PJW6 202 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 F8W735 103 aaPredicted RBP3.71□□□□□ -1.82
HTT-202ENST00000502820 IGHV3-23P01764 117 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 ZNF80P51504 273 aaPredicted RBP3.71□□□□□ -1.82
HTT-202ENST00000502820 HIST1H4AP62805 103 aaKnown RBP3.71□□□□□ -1.82
HTT-202ENST00000502820 HERVK_113P63121 156 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 TNP2Q05952 138 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 ZNF56Q15929 161 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 MIAQ16674 131 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 S100A7L2Q5SY68 101 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 C1orf134Q5TEV5 83 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 CLEC19AQ6UXS0 136 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 UNQ9165/PRO28630Q6UXU0 137 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 RNF182Q8N6D2 247 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 EEF1AKMT3Q96AZ1 226 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 AMELXQ99217 191 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 MSRB1Q9NZV6 116 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 TP53TG1Q9Y2A0 90 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 PYGO1Q9Y3Y4 419 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 S4R3C0 116 aa3.71□□□□□ -1.82
HTT-202ENST00000502820 TRAV26-2A0A0B4J265 109 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 TEX49A0A1B0GTD5 131 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 H7C423 109 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 TRIAP1O43715 76 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 NDUFC2O95298 119 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 IGHV3-48P01763 117 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 CRYGDP07320 174 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 S100A4P26447 101 aaKnown RBP3.7□□□□□ -1.82
HTT-202ENST00000502820 POLR2KP53803 58 aaKnown RBP3.7□□□□□ -1.82
HTT-202ENST00000502820 MRPS36P82909 103 aaKnown RBP3.7□□□□□ -1.82
HTT-202ENST00000502820 TMEM61Q8N0U2 210 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 C17orf77Q96MU5 243 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 ZFAND3Q9H8U3 227 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 PHLDA3Q9Y5J5 127 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 DNAH11Q96DT5 4516 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 TNCP24821 2201 aa3.7□□□□□ -1.82
HTT-202ENST00000502820 FAT2Q9NYQ8 4349 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 AGRNO00468 2067 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 COX7A2LO14548 114 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 BUB3O43684 328 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 LINC00694P0DN24 101 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 RNASE4P34096 147 aaKnown RBP3.69□□□□□ -1.82
HTT-202ENST00000502820 ID1P41134 155 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 RPL18AQ02543 176 aaKnown RBP3.69□□□□□ -1.82
HTT-202ENST00000502820 CIRBPQ14011 172 aaKnown RBP3.69□□□□□ -1.82
HTT-202ENST00000502820 PIK3CD-AS1Q5SR53 167 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 Q6ZQT7 251 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 Q6ZTC4 211 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 FAM19A5Q7Z5A7 132 aaPredicted RBP3.69□□□□□ -1.82
HTT-202ENST00000502820 TRPT1Q86TN4 253 aaKnown RBP3.69□□□□□ -1.82
HTT-202ENST00000502820 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 Q8TAT8 98 aa3.69□□□□□ -1.82
HTT-202ENST00000502820 DAZ1Q9NQZ3 744 aaKnown RBP3.69□□□□□ -1.82
HTT-202ENST00000502820 TRAV10A0A0B4J240 114 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 IGHV3-35A0A0C4DH35 117 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 K7EMT4 169 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 NDUFA4O00483 81 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 CTSGP08311 255 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 GATA1P15976 413 aaPredicted RBP3.68□□□□□ -1.82
HTT-202ENST00000502820 ATP5EP56381 51 aaPredicted RBP3.68□□□□□ -1.82
HTT-202ENST00000502820 Q5VSD8 79 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 Q6JHZ5 121 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 MUSTN1Q8IVN3 82 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 DCANP1Q8TF63 244 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 VSIG2Q96IQ7 327 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms