RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 RPL32P62910 135 aaKnown RBP4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 TMEM241Q24JQ0 296 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 SVBPQ8N300 66 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 NUP35Q8NFH5 326 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 OR10D4PQ8NGN7 298 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 RPL39LQ96EH5 51 aaKnown RBP4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 IMMP2LQ96T52 175 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 KIR2DL4Q99706 377 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 RNASE7Q9H1E1 156 aaKnown RBP4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 ZNF727A8MUV8 499 aa4.41□□□□□ -1.7
SH3RF1-202ENST00000502315 SNAPINO95295 136 aa4.41□□□□□ -1.7
SH3RF1-202ENST00000502315 TSHBP01222 138 aa4.41□□□□□ -1.7
SH3RF1-202ENST00000502315 TLX1NBP0CAT3 122 aa4.41□□□□□ -1.7
SH3RF1-202ENST00000502315 FAM74A3Q4VXF1 159 aa4.41□□□□□ -1.7
SH3RF1-202ENST00000502315 CBLN2Q8IUK8 224 aa4.41□□□□□ -1.7
SH3RF1-202ENST00000502315 DIRC1Q969H9 104 aa4.41□□□□□ -1.7
SH3RF1-202ENST00000502315 LRP2P98164 4655 aa4.41□□□□□ -1.7
SH3RF1-202ENST00000502315 A0A1B0GW15 77 aa4.4□□□□□ -1.71
SH3RF1-202ENST00000502315 RAB4AP20338 218 aa4.4□□□□□ -1.71
SH3RF1-202ENST00000502315 RIGQ13278 110 aa4.4□□□□□ -1.71
SH3RF1-202ENST00000502315 CAMK2N2Q96S95 79 aa4.4□□□□□ -1.71
SH3RF1-202ENST00000502315 SMIM7Q9BQ49 75 aa4.4□□□□□ -1.71
SH3RF1-202ENST00000502315 C20orf78Q9BR46 151 aa4.4□□□□□ -1.71
SH3RF1-202ENST00000502315 OSTCQ9NRP0 149 aa4.4□□□□□ -1.71
SH3RF1-202ENST00000502315 MRPL35Q9NZE8 188 aaKnown RBP4.4□□□□□ -1.71
SH3RF1-202ENST00000502315 IGLV1-50A0A075B6I6 118 aa4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 TRBV24-1A0A075B6N3 115 aa4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 HIGD1CA8MV81 97 aa4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 MT-ND6P03923 174 aa4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 FCER1GP30273 86 aa4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 SUMO2P61956 95 aaKnown RBP4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 RPL23P62829 140 aaKnown RBP4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 GAGE2BQ13066 116 aa4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 ADIRFQ15847 76 aa4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 C9orf116Q5BN46 136 aaPredicted RBP4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 RPS10P5Q9NQ39 176 aa4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 NAT8Q9UHE5 227 aa4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 UBE2D4Q9Y2X8 147 aa4.39□□□□□ -1.71
SH3RF1-202ENST00000502315 A0A1W2PNN7 141 aa4.38□□□□□ -1.71
SH3RF1-202ENST00000502315 RPL13AP40429 203 aaKnown RBP4.38□□□□□ -1.71
SH3RF1-202ENST00000502315 MRPS36P82909 103 aaKnown RBP4.38□□□□□ -1.71
SH3RF1-202ENST00000502315 RHEBQ15382 184 aa4.38□□□□□ -1.71
SH3RF1-202ENST00000502315 LINC01561Q8N1V8 128 aa4.38□□□□□ -1.71
SH3RF1-202ENST00000502315 SPANXA1Q9NS26 97 aa4.38□□□□□ -1.71
SH3RF1-202ENST00000502315 TMEM242Q9NWH2 141 aa4.38□□□□□ -1.71
SH3RF1-202ENST00000502315 IGHV3OR16-9A0A0B4J2B5 98 aa4.37□□□□□ -1.71
SH3RF1-202ENST00000502315 NDUFA1O15239 70 aa4.37□□□□□ -1.71
SH3RF1-202ENST00000502315 PPBPP02775 128 aa4.37□□□□□ -1.71
SH3RF1-202ENST00000502315 IGLV7-43P04211 117 aa4.37□□□□□ -1.71
SH3RF1-202ENST00000502315 S100A8P05109 93 aa4.37□□□□□ -1.71
SH3RF1-202ENST00000502315 PNRC1Q12796 327 aaPredicted RBP4.37□□□□□ -1.71
SH3RF1-202ENST00000502315 LINC01551Q86U37 167 aa4.37□□□□□ -1.71
SH3RF1-202ENST00000502315 NAT8BQ9UHF3 227 aa4.37□□□□□ -1.71
SH3RF1-202ENST00000502315 A0A0U1RQV1 116 aa4.36□□□□□ -1.71
SH3RF1-202ENST00000502315 H0Y9J4 135 aa4.36□□□□□ -1.71
SH3RF1-202ENST00000502315 CTAG1AP78358 180 aa4.36□□□□□ -1.71
SH3RF1-202ENST00000502315 SPAG11BQ08648 103 aa4.36□□□□□ -1.71
SH3RF1-202ENST00000502315 C1orf137Q5JT78 98 aa4.36□□□□□ -1.71
SH3RF1-202ENST00000502315 FAM104BQ5XKR9 115 aa4.36□□□□□ -1.71
SH3RF1-202ENST00000502315 AMN1Q8IY45 258 aa4.36□□□□□ -1.71
SH3RF1-202ENST00000502315 NRACQ8N912 160 aa4.36□□□□□ -1.71
SH3RF1-202ENST00000502315 SMCO4Q9NRQ5 59 aa4.36□□□□□ -1.71
SH3RF1-202ENST00000502315 TMA7Q9Y2S6 64 aaKnown RBP4.36□□□□□ -1.71
SH3RF1-202ENST00000502315 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
SH3RF1-202ENST00000502315 TRAV13-1A0A0B4J241 112 aa4.35□□□□□ -1.71
SH3RF1-202ENST00000502315 TRBV30A0A0K0K1B3 111 aa4.35□□□□□ -1.71
SH3RF1-202ENST00000502315 GAS8-AS1O95177 125 aa4.35□□□□□ -1.71
SH3RF1-202ENST00000502315 NPSP0C0P6 89 aa4.35□□□□□ -1.71
SH3RF1-202ENST00000502315 RPL18AQ02543 176 aaKnown RBP4.35□□□□□ -1.71
SH3RF1-202ENST00000502315 LINC00526Q96FQ7 95 aa4.35□□□□□ -1.71
SH3RF1-202ENST00000502315 PYGO1Q9Y3Y4 419 aa4.35□□□□□ -1.71
SH3RF1-202ENST00000502315 V9GYV3 84 aa4.35□□□□□ -1.71
SH3RF1-202ENST00000502315 A0A087WZ39 114 aa4.34□□□□□ -1.71
SH3RF1-202ENST00000502315 SMIM27A0A1W2PRY6 76 aa4.34□□□□□ -1.71
SH3RF1-202ENST00000502315 COLCA2A8K830 154 aa4.34□□□□□ -1.71
SH3RF1-202ENST00000502315 PRSS47A8MTI9 375 aa4.34□□□□□ -1.71
SH3RF1-202ENST00000502315 MT-ND4LP03901 98 aa4.34□□□□□ -1.71
SH3RF1-202ENST00000502315 HBBP68871 147 aa4.34□□□□□ -1.71
SH3RF1-202ENST00000502315 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
SH3RF1-202ENST00000502315 C5orf38Q86SI9 138 aa4.34□□□□□ -1.71
SH3RF1-202ENST00000502315 YPEL4Q96NS1 127 aa4.34□□□□□ -1.71
SH3RF1-202ENST00000502315 CTDSP1Q9GZU7 261 aa4.34□□□□□ -1.71
SH3RF1-202ENST00000502315 TGIF2-C20orf24A0A0A6YYL0 155 aa4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 NDUFC2-KCTD14E9PQ53 114 aa4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 K7EMI3 77 aa4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 NUPR1O60356 82 aa4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 G0S2P27469 103 aa4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 CKS2P33552 79 aa4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 MRPL51Q4U2R6 128 aaKnown RBP4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 PHF5AQ7RTV0 110 aaKnown RBP4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 ORAOV1Q8WV07 137 aa4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 ANAPC16Q96DE5 110 aa4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 LAMTOR2Q9Y2Q5 125 aa4.33□□□□□ -1.72
SH3RF1-202ENST00000502315 TNFRSF6BO95407 300 aa4.32□□□□□ -1.72
SH3RF1-202ENST00000502315 RAB5AP20339 215 aa4.32□□□□□ -1.72
SH3RF1-202ENST00000502315 IFI27P40305 119 aaPredicted RBP4.32□□□□□ -1.72
SH3RF1-202ENST00000502315 UBE2D1P51668 147 aa4.32□□□□□ -1.72
SH3RF1-202ENST00000502315 Q6ZUT4 128 aa4.32□□□□□ -1.72
SH3RF1-202ENST00000502315 PACRGQ96M98 296 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms