RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 TTTY13Q9BZ97 58 aa18.14■□□□□ 0.49
HOXB3-212ENST00000498678 A0A096LPF7 62 aa18.13■□□□□ 0.49
HOXB3-212ENST00000498678 B5MCH6 92 aa18.13■□□□□ 0.49
HOXB3-212ENST00000498678 TMEM170BQ5T4T1 132 aa18.13■□□□□ 0.49
HOXB3-212ENST00000498678 A0A0J9YWU9 116 aa18.12■□□□□ 0.49
HOXB3-212ENST00000498678 FOXI1Q12951 378 aa18.12■□□□□ 0.49
HOXB3-212ENST00000498678 PRO0461Q9UI25 63 aa18.12■□□□□ 0.49
HOXB3-212ENST00000498678 TM2D2Q9BX73 214 aa18.11■□□□□ 0.49
HOXB3-212ENST00000498678 CDC42SE2Q9NRR3 84 aa18.11■□□□□ 0.49
HOXB3-212ENST00000498678 TM2D3Q9BRN9 247 aa18.1■□□□□ 0.49
HOXB3-212ENST00000498678 SMIM20Q8N5G0 67 aa18.1■□□□□ 0.49
HOXB3-212ENST00000498678 CHCHD5Q9BSY4 110 aa18.1■□□□□ 0.49
HOXB3-212ENST00000498678 ZNF22P17026 224 aaPredicted RBP18.09■□□□□ 0.49
HOXB3-212ENST00000498678 ZFAND6Q6FIF0 208 aa18.09■□□□□ 0.49
HOXB3-212ENST00000498678 IGLL5B9A064 214 aa18.08■□□□□ 0.49
HOXB3-212ENST00000498678 MT-ATP8P03928 68 aa18.08■□□□□ 0.49
HOXB3-212ENST00000498678 UBE2D1P51668 147 aa18.08■□□□□ 0.49
HOXB3-212ENST00000498678 MRAPQ8TCY5 172 aa18.08■□□□□ 0.49
HOXB3-212ENST00000498678 MAPKAPK5-AS1Q8N8E1 139 aa18.08■□□□□ 0.48
HOXB3-212ENST00000498678 TMEM101Q96IK0 257 aa18.08■□□□□ 0.48
HOXB3-212ENST00000498678 APOMO95445 188 aa18.07■□□□□ 0.48
HOXB3-212ENST00000498678 HERVK_113P61574 105 aa18.07■□□□□ 0.48
HOXB3-212ENST00000498678 TINCRA0A1B0GVN0 87 aa18.07■□□□□ 0.48
HOXB3-212ENST00000498678 Q6ZTC4 211 aa18.07■□□□□ 0.48
HOXB3-212ENST00000498678 TENM3Q9P273 2699 aa18.06■□□□□ 0.48
HOXB3-212ENST00000498678 MRPL23Q16540 153 aaKnown RBP18.06■□□□□ 0.48
HOXB3-212ENST00000498678 TMEM223A0PJW6 202 aa18.05■□□□□ 0.48
HOXB3-212ENST00000498678 H3BMG7 143 aa18.04■□□□□ 0.48
HOXB3-212ENST00000498678 GCSHP23434 173 aa18.04■□□□□ 0.48
HOXB3-212ENST00000498678 ICOSQ9Y6W8 199 aa18.04■□□□□ 0.48
HOXB3-212ENST00000498678 A0A1B0GWB2 263 aa18.03■□□□□ 0.48
HOXB3-212ENST00000498678 FXYD2P54710 66 aa18.03■□□□□ 0.48
HOXB3-212ENST00000498678 XGP55808 180 aa18.03■□□□□ 0.48
HOXB3-212ENST00000498678 IGLV4-60A0A075B6I1 120 aa18.03■□□□□ 0.48
HOXB3-212ENST00000498678 TAL2Q16559 108 aa18.03■□□□□ 0.48
HOXB3-212ENST00000498678 C11orf45Q8TAV5 145 aa18.02■□□□□ 0.48
HOXB3-212ENST00000498678 NANOS2P60321 138 aaKnown RBP18.01■□□□□ 0.47
HOXB3-212ENST00000498678 TIRAPP58753 221 aa18.01■□□□□ 0.47
HOXB3-212ENST00000498678 FAM19A3Q7Z5A8 133 aa18.01■□□□□ 0.47
HOXB3-212ENST00000498678 TRAV13-1A0A0B4J241 112 aa18■□□□□ 0.47
HOXB3-212ENST00000498678 MYMXA0A1B0GTQ4 84 aa18■□□□□ 0.47
HOXB3-212ENST00000498678 LINC00242Q5T6M2 205 aa18■□□□□ 0.47
HOXB3-212ENST00000498678 TMEM262E9PQX1 116 aa17.99■□□□□ 0.47
HOXB3-212ENST00000498678 CEND1Q8N111 149 aa17.99■□□□□ 0.47
HOXB3-212ENST00000498678 H3BNG1 76 aa17.98■□□□□ 0.47
HOXB3-212ENST00000498678 NHLRC4P0CG21 123 aaPredicted RBP17.98■□□□□ 0.47
HOXB3-212ENST00000498678 TSPEAR-AS2P59090 65 aa17.98■□□□□ 0.47
HOXB3-212ENST00000498678 COX6A2Q02221 97 aa17.98■□□□□ 0.47
HOXB3-212ENST00000498678 IGLV5-45A0A087WSX0 123 aa17.97■□□□□ 0.47
HOXB3-212ENST00000498678 A0A1B0GUV1 79 aa17.97■□□□□ 0.47
HOXB3-212ENST00000498678 IGHV3-64A0A075B6Q5 118 aa17.96■□□□□ 0.47
HOXB3-212ENST00000498678 LEPROTO15243 131 aa17.96■□□□□ 0.47
HOXB3-212ENST00000498678 CDKN2A-AS1Q9UH64 79 aa17.96■□□□□ 0.47
HOXB3-212ENST00000498678 HERVK_113P63121 156 aa17.96■□□□□ 0.46
HOXB3-212ENST00000498678 NHP2Q9NX24 153 aaKnown RBP17.96■□□□□ 0.46
HOXB3-212ENST00000498678 ZNF815PA8K554 130 aa17.95■□□□□ 0.46
HOXB3-212ENST00000498678 J3QQQ9 107 aa17.95■□□□□ 0.46
HOXB3-212ENST00000498678 PPDPFLQ8WWR9 84 aa17.95■□□□□ 0.46
HOXB3-212ENST00000498678 DEFB131BA0A096LNP1 70 aa17.93■□□□□ 0.46
HOXB3-212ENST00000498678 TRAV8-3A0A0A6YYJ7 113 aa17.93■□□□□ 0.46
HOXB3-212ENST00000498678 K7ERJ3 54 aa17.93■□□□□ 0.46
HOXB3-212ENST00000498678 LELP1Q5T871 98 aa17.93■□□□□ 0.46
HOXB3-212ENST00000498678 IGHV1-58A0A0C4DH39 117 aa17.91■□□□□ 0.46
HOXB3-212ENST00000498678 IGHV3-30-3P0DP02 117 aa17.91■□□□□ 0.46
HOXB3-212ENST00000498678 LYPD5Q6UWN5 251 aa17.91■□□□□ 0.46
HOXB3-212ENST00000498678 PLEKHB2Q96CS7 222 aa17.91■□□□□ 0.46
HOXB3-212ENST00000498678 LGALS3P17931 250 aaKnown RBP17.91■□□□□ 0.46
HOXB3-212ENST00000498678 C5orf47Q569G3 176 aa17.91■□□□□ 0.46
HOXB3-212ENST00000498678 Q6Q795 121 aa17.91■□□□□ 0.46
HOXB3-212ENST00000498678 IGKV3OR2-268A0A0C4DH90 116 aa17.9■□□□□ 0.46
HOXB3-212ENST00000498678 NDUFV3P56181 108 aaKnown RBP17.9■□□□□ 0.46
HOXB3-212ENST00000498678 TMEM126AQ9H061 195 aa17.9■□□□□ 0.46
HOXB3-212ENST00000498678 HUWE1Q7Z6Z7 4374 aaKnown RBP17.88■□□□□ 0.45
HOXB3-212ENST00000498678 Q8N3U1 123 aa17.87■□□□□ 0.45
HOXB3-212ENST00000498678 LINC00959A0A1B0GUT2 108 aa17.86■□□□□ 0.45
HOXB3-212ENST00000498678 GAGE2BQ13066 116 aa17.86■□□□□ 0.45
HOXB3-212ENST00000498678 GAGE2EQ4V326 116 aa17.86■□□□□ 0.45
HOXB3-212ENST00000498678 SCGB1D4Q6XE38 83 aa17.86■□□□□ 0.45
HOXB3-212ENST00000498678 GAGE2DQ9UEU5 116 aa17.86■□□□□ 0.45
HOXB3-212ENST00000498678 TEN1Q86WV5 123 aa17.84■□□□□ 0.45
HOXB3-212ENST00000498678 IFITM1P13164 125 aa17.84■□□□□ 0.45
HOXB3-212ENST00000498678 TRAV10A0A0B4J240 114 aa17.83■□□□□ 0.45
HOXB3-212ENST00000498678 SMCPP49901 116 aaPredicted RBP17.83■□□□□ 0.45
HOXB3-212ENST00000498678 TTC32Q5I0X7 151 aa17.83■□□□□ 0.45
HOXB3-212ENST00000498678 B9D2Q9BPU9 175 aa17.83■□□□□ 0.45
HOXB3-212ENST00000498678 IGLV5-39A0A0G2JS06 123 aa17.83■□□□□ 0.44
HOXB3-212ENST00000498678 SMIM1B2RUZ4 78 aa17.83■□□□□ 0.44
HOXB3-212ENST00000498678 CCDC179H3BU77 68 aa17.83■□□□□ 0.44
HOXB3-212ENST00000498678 LINC00269Q8N2A0 174 aa17.81■□□□□ 0.44
HOXB3-212ENST00000498678 CLPSL2Q6UWE3 100 aa17.81■□□□□ 0.44
HOXB3-212ENST00000498678 ANGP03950 147 aaKnown RBP17.8■□□□□ 0.44
HOXB3-212ENST00000498678 CARD19Q96LW7 228 aa17.8■□□□□ 0.44
HOXB3-212ENST00000498678 IGHV3OR16-9A0A0B4J2B5 98 aa17.8■□□□□ 0.44
HOXB3-212ENST00000498678 LYRM7Q5U5X0 104 aa17.79■□□□□ 0.44
HOXB3-212ENST00000498678 C10orf126Q8N4M7 172 aa17.79■□□□□ 0.44
HOXB3-212ENST00000498678 HIST1H4GQ99525 98 aa17.79■□□□□ 0.44
HOXB3-212ENST00000498678 SS18Q15532 418 aa17.79■□□□□ 0.44
HOXB3-212ENST00000498678 ESRGQ1W209 222 aa17.79■□□□□ 0.44
HOXB3-212ENST00000498678 NDUFA12Q9UI09 145 aa17.78■□□□□ 0.44
HOXB3-212ENST00000498678 M0QXV9 152 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms