RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 SND1-IT1Q9HBX3 110 aa8.4□□□□□ -1.06
PBX1-211ENST00000498497 TMEM190Q8WZ59 177 aa8.4□□□□□ -1.06
PBX1-211ENST00000498497 UBL5Q9BZL1 73 aa8.4□□□□□ -1.06
PBX1-211ENST00000498497 PTPN13Q12923 2485 aa8.4□□□□□ -1.07
PBX1-211ENST00000498497 MRPL53Q96EL3 112 aaKnown RBP8.4□□□□□ -1.07
PBX1-211ENST00000498497 TLN2Q9Y4G6 2542 aa8.39□□□□□ -1.07
PBX1-211ENST00000498497 M0R2N4 97 aa8.39□□□□□ -1.07
PBX1-211ENST00000498497 BSPH1Q075Z2 132 aa8.39□□□□□ -1.07
PBX1-211ENST00000498497 Q8N9L7 120 aa8.39□□□□□ -1.07
PBX1-211ENST00000498497 DPM3Q9P2X0 92 aa8.39□□□□□ -1.07
PBX1-211ENST00000498497 FAM104AQ969W3 186 aa8.38□□□□□ -1.07
PBX1-211ENST00000498497 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
PBX1-211ENST00000498497 ZNF462Q96JM2 2506 aa8.38□□□□□ -1.07
PBX1-211ENST00000498497 FAM222AQ5U5X8 452 aa8.38□□□□□ -1.07
PBX1-211ENST00000498497 NBEAL2Q6ZNJ1 2754 aa8.37□□□□□ -1.07
PBX1-211ENST00000498497 DKK4Q9UBT3 224 aa8.37□□□□□ -1.07
PBX1-211ENST00000498497 IGHV7-81A0A0B4J1V7 117 aa8.37□□□□□ -1.07
PBX1-211ENST00000498497 NDUFA1O15239 70 aa8.37□□□□□ -1.07
PBX1-211ENST00000498497 SPTSSBQ8NFR3 76 aa8.37□□□□□ -1.07
PBX1-211ENST00000498497 ORMDL1Q9P0S3 153 aa8.36□□□□□ -1.07
PBX1-211ENST00000498497 SEM1Q6ZVN7 128 aa8.36□□□□□ -1.07
PBX1-211ENST00000498497 ATRXP46100 2492 aa8.35□□□□□ -1.07
PBX1-211ENST00000498497 OTOGLQ3ZCN5 2332 aa8.35□□□□□ -1.07
PBX1-211ENST00000498497 TRAV7A0A075B6U4 112 aa8.35□□□□□ -1.07
PBX1-211ENST00000498497 MIFP14174 115 aa8.35□□□□□ -1.07
PBX1-211ENST00000498497 Q8N3U1 123 aa8.35□□□□□ -1.07
PBX1-211ENST00000498497 CR1P17927 2039 aa8.35□□□□□ -1.07
PBX1-211ENST00000498497 A8MTW9 85 aa8.35□□□□□ -1.07
PBX1-211ENST00000498497 VPS13CQ709C8 3753 aa8.35□□□□□ -1.07
PBX1-211ENST00000498497 NCOR2Q9Y618 2525 aa8.34□□□□□ -1.07
PBX1-211ENST00000498497 C6orf226Q5I0X4 101 aa8.34□□□□□ -1.07
PBX1-211ENST00000498497 Q6ZSN1 163 aa8.34□□□□□ -1.07
PBX1-211ENST00000498497 ZFYVE26Q68DK2 2539 aa8.34□□□□□ -1.07
PBX1-211ENST00000498497 IGKV2-28A0A075B6P5 120 aa8.34□□□□□ -1.07
PBX1-211ENST00000498497 IGKV2D-28P01615 120 aa8.34□□□□□ -1.07
PBX1-211ENST00000498497 MRPL55Q7Z7F7 128 aaKnown RBP8.34□□□□□ -1.07
PBX1-211ENST00000498497 LAMTOR3Q9UHA4 124 aa8.34□□□□□ -1.07
PBX1-211ENST00000498497 ZNF843Q8N446 348 aa8.34□□□□□ -1.08
PBX1-211ENST00000498497 BBC3Q96PG8 261 aaPredicted RBP8.33□□□□□ -1.08
PBX1-211ENST00000498497 A0A1W2PNU3 283 aaPredicted RBP8.33□□□□□ -1.08
PBX1-211ENST00000498497 CEP295Q9C0D2 2601 aa8.33□□□□□ -1.08
PBX1-211ENST00000498497 IGHV3-53P01767 116 aa8.32□□□□□ -1.08
PBX1-211ENST00000498497 C11orf45Q8TAV5 145 aa8.32□□□□□ -1.08
PBX1-211ENST00000498497 F8P00451 2351 aa8.32□□□□□ -1.08
PBX1-211ENST00000498497 TRAV13-2A0A0B4J235 113 aa8.32□□□□□ -1.08
PBX1-211ENST00000498497 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
PBX1-211ENST00000498497 IGHV3OR16-12A0A075B7B8 117 aa8.31□□□□□ -1.08
PBX1-211ENST00000498497 IGFL3Q6UXB1 125 aa8.31□□□□□ -1.08
PBX1-211ENST00000498497 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
PBX1-211ENST00000498497 COX7B2Q8TF08 81 aa8.3□□□□□ -1.08
PBX1-211ENST00000498497 RHPN1-AS1Q9BWJ2 59 aa8.3□□□□□ -1.08
PBX1-211ENST00000498497 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.08
PBX1-211ENST00000498497 TRBV6-5A0A0K0K1A5 114 aa8.3□□□□□ -1.08
PBX1-211ENST00000498497 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
PBX1-211ENST00000498497 C19orf54Q5BKX5 351 aa8.3□□□□□ -1.08
PBX1-211ENST00000498497 LINC00242Q5T6M2 205 aa8.3□□□□□ -1.08
PBX1-211ENST00000498497 COL27A1Q8IZC6 1860 aaPredicted RBP8.3□□□□□ -1.08
PBX1-211ENST00000498497 TRBV10-1A0A0K0K1A3 114 aa8.29□□□□□ -1.08
PBX1-211ENST00000498497 LINC01547P58512 204 aaPredicted RBP8.29□□□□□ -1.08
PBX1-211ENST00000498497 CFHR3Q02985 330 aa8.29□□□□□ -1.08
PBX1-211ENST00000498497 KLKP1Q107X0 134 aa8.29□□□□□ -1.08
PBX1-211ENST00000498497 ESRGQ1W209 222 aa8.29□□□□□ -1.08
PBX1-211ENST00000498497 FUSP35637 526 aaKnown RBP eCLIP8.29□□□□□ -1.08
PBX1-211ENST00000498497 Q8N9W7 124 aa8.29□□□□□ -1.08
PBX1-211ENST00000498497 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
PBX1-211ENST00000498497 COPS9Q8WXC6 57 aa8.29□□□□□ -1.08
PBX1-211ENST00000498497 FAM110DQ8TAY7 271 aaPredicted RBP8.28□□□□□ -1.08
PBX1-211ENST00000498497 CELA1Q9UNI1 258 aa8.28□□□□□ -1.08
PBX1-211ENST00000498497 CCL18P55774 89 aa8.28□□□□□ -1.08
PBX1-211ENST00000498497 CHCHD7Q9BUK0 85 aa8.28□□□□□ -1.08
PBX1-211ENST00000498497 HIGD2AQ9BW72 106 aa8.28□□□□□ -1.08
PBX1-211ENST00000498497 ARRDC1-AS1Q9H2J1 176 aa8.28□□□□□ -1.08
PBX1-211ENST00000498497 NF1P21359 2839 aa8.28□□□□□ -1.08
PBX1-211ENST00000498497 NAV2Q8IVL1 2488 aa8.27□□□□□ -1.08
PBX1-211ENST00000498497 C4orf48Q5BLP8 95 aa8.27□□□□□ -1.08
PBX1-211ENST00000498497 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.27□□□□□ -1.08
PBX1-211ENST00000498497 SPATA3Q8NHX4 192 aa8.27□□□□□ -1.08
PBX1-211ENST00000498497 NREPQ16612 68 aa8.27□□□□□ -1.09
PBX1-211ENST00000498497 LINC01356Q8N9X3 169 aa8.27□□□□□ -1.09
PBX1-211ENST00000498497 KHDC1LQ5JSQ8 128 aa8.27□□□□□ -1.09
PBX1-211ENST00000498497 LY6EQ16553 131 aa8.26□□□□□ -1.09
PBX1-211ENST00000498497 APCP25054 2843 aa8.26□□□□□ -1.09
PBX1-211ENST00000498497 NPBQ8NG41 125 aa8.25□□□□□ -1.09
PBX1-211ENST00000498497 CHD8Q9HCK8 2581 aa8.25□□□□□ -1.09
PBX1-211ENST00000498497 USP9YO00507 2555 aaPredicted RBP8.25□□□□□ -1.09
PBX1-211ENST00000498497 LENEPQ9Y5L5 61 aa8.25□□□□□ -1.09
PBX1-211ENST00000498497 FAM215AQ9Y5M1 114 aa8.25□□□□□ -1.09
PBX1-211ENST00000498497 ACACBO00763 2458 aa8.25□□□□□ -1.09
PBX1-211ENST00000498497 HRNRQ86YZ3 2850 aaPredicted RBP8.25□□□□□ -1.09
PBX1-211ENST00000498497 CENPEQ02224 2701 aa8.24□□□□□ -1.09
PBX1-211ENST00000498497 Q6ZVQ6 151 aa8.24□□□□□ -1.09
PBX1-211ENST00000498497 CD164Q04900 197 aa8.24□□□□□ -1.09
PBX1-211ENST00000498497 RBM12B-AS1Q9P1G2 102 aa8.24□□□□□ -1.09
PBX1-211ENST00000498497 PLAC8L1A1L4L8 177 aa8.23□□□□□ -1.09
PBX1-211ENST00000498497 DEFB109BQ30KR1 87 aa8.23□□□□□ -1.09
PBX1-211ENST00000498497 RNF5Q99942 180 aa8.23□□□□□ -1.09
PBX1-211ENST00000498497 E7EQL1 145 aa8.23□□□□□ -1.09
PBX1-211ENST00000498497 MED14OSP0DP75 135 aa8.23□□□□□ -1.09
PBX1-211ENST00000498497 A8MUN3 132 aa8.23□□□□□ -1.09
PBX1-211ENST00000498497 H0YGX0 51 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms