RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 C5orf38Q86SI9 138 aa7.59□□□□□ -1.19
CTTN-208ENST00000498223 MAPKAPK5-AS1Q8N8E1 139 aa7.59□□□□□ -1.19
CTTN-208ENST00000498223 A0A087WTM6 91 aa7.58□□□□□ -1.2
CTTN-208ENST00000498223 A0A0J9YXV3 536 aa7.58□□□□□ -1.2
CTTN-208ENST00000498223 USP17L23D6RBM5 183 aa7.58□□□□□ -1.2
CTTN-208ENST00000498223 HERVK_113P63121 156 aa7.58□□□□□ -1.2
CTTN-208ENST00000498223 LINC00242Q5T6M2 205 aa7.58□□□□□ -1.2
CTTN-208ENST00000498223 CFAP161Q6P656 301 aa7.58□□□□□ -1.2
CTTN-208ENST00000498223 KRTAP26-1Q6PEX3 210 aa7.58□□□□□ -1.2
CTTN-208ENST00000498223 MAP1LC3CQ9BXW4 147 aa7.58□□□□□ -1.2
CTTN-208ENST00000498223 APOMO95445 188 aa7.57□□□□□ -1.2
CTTN-208ENST00000498223 COX6A2Q02221 97 aa7.57□□□□□ -1.2
CTTN-208ENST00000498223 C14orf177Q52M58 125 aa7.57□□□□□ -1.2
CTTN-208ENST00000498223 TMA7Q9Y2S6 64 aaKnown RBP7.57□□□□□ -1.2
CTTN-208ENST00000498223 CHTOPQ9Y3Y2 248 aaKnown RBP7.57□□□□□ -1.2
CTTN-208ENST00000498223 FAT2Q9NYQ8 4349 aa7.56□□□□□ -1.2
CTTN-208ENST00000498223 TINCRA0A1B0GVN0 87 aa7.56□□□□□ -1.2
CTTN-208ENST00000498223 SNRPEP62304 92 aaKnown RBP7.56□□□□□ -1.2
CTTN-208ENST00000498223 LINC00469Q8N7U9 141 aa7.56□□□□□ -1.2
CTTN-208ENST00000498223 CHAC1Q9BUX1 264 aa7.56□□□□□ -1.2
CTTN-208ENST00000498223 KRTAP17-1Q9BYP8 105 aa7.56□□□□□ -1.2
CTTN-208ENST00000498223 DNAH2Q9P225 4427 aa7.56□□□□□ -1.2
CTTN-208ENST00000498223 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.55□□□□□ -1.2
CTTN-208ENST00000498223 TRAV12-1A0A0B4J245 112 aa7.55□□□□□ -1.2
CTTN-208ENST00000498223 IGHV3OR16-9A0A0B4J2B5 98 aa7.55□□□□□ -1.2
CTTN-208ENST00000498223 IGHV1-58A0A0C4DH39 117 aa7.55□□□□□ -1.2
CTTN-208ENST00000498223 hDV102S1A0JD36 115 aa7.55□□□□□ -1.2
CTTN-208ENST00000498223 LRCOL1A6NCL2 159 aa7.55□□□□□ -1.2
CTTN-208ENST00000498223 KRTDAPP60985 99 aa7.55□□□□□ -1.2
CTTN-208ENST00000498223 WFDC2Q14508 124 aa7.55□□□□□ -1.2
CTTN-208ENST00000498223 HIGD2BQ4VC39 106 aa7.55□□□□□ -1.2
CTTN-208ENST00000498223 PACRGQ96M98 296 aaPredicted RBP7.55□□□□□ -1.2
CTTN-208ENST00000498223 A0A1B0GVY2 172 aa7.54□□□□□ -1.2
CTTN-208ENST00000498223 H3BRM9 83 aa7.54□□□□□ -1.2
CTTN-208ENST00000498223 IGLC3P0DOY3 106 aa7.54□□□□□ -1.2
CTTN-208ENST00000498223 TMEM170BQ5T4T1 132 aa7.54□□□□□ -1.2
CTTN-208ENST00000498223 FAM19A3Q7Z5A8 133 aa7.54□□□□□ -1.2
CTTN-208ENST00000498223 HIST3H2BBQ8N257 126 aa7.54□□□□□ -1.2
CTTN-208ENST00000498223 Q8N814 137 aa7.54□□□□□ -1.2
CTTN-208ENST00000498223 CDKN2A-AS1Q9UH64 79 aa7.54□□□□□ -1.2
CTTN-208ENST00000498223 A0A087WZ39 114 aa7.53□□□□□ -1.2
CTTN-208ENST00000498223 F8VRH5 84 aa7.53□□□□□ -1.2
CTTN-208ENST00000498223 ZNF561-AS1K7EIQ3 104 aa7.53□□□□□ -1.2
CTTN-208ENST00000498223 SPATA12Q7Z6I5 190 aa7.53□□□□□ -1.2
CTTN-208ENST00000498223 ORAOV1Q8WV07 137 aa7.53□□□□□ -1.2
CTTN-208ENST00000498223 MRPL35Q9NZE8 188 aaKnown RBP7.53□□□□□ -1.2
CTTN-208ENST00000498223 TOMM7Q9P0U1 55 aa7.53□□□□□ -1.2
CTTN-208ENST00000498223 KIAA1109Q2LD37 5005 aa7.52□□□□□ -1.21
CTTN-208ENST00000498223 IGLV4-69A0A075B6H9 119 aa7.52□□□□□ -1.21
CTTN-208ENST00000498223 SYS1-DBNDD2H3BUS1 97 aa7.52□□□□□ -1.21
CTTN-208ENST00000498223 C3orf79P0CE67 100 aa7.52□□□□□ -1.21
CTTN-208ENST00000498223 ODF1Q14990 250 aa7.52□□□□□ -1.21
CTTN-208ENST00000498223 C15orf56Q8N910 161 aa7.52□□□□□ -1.21
CTTN-208ENST00000498223 PMCHL2Q9BQD1 86 aa7.52□□□□□ -1.21
CTTN-208ENST00000498223 DNAH17Q9UFH2 4485 aa7.52□□□□□ -1.21
CTTN-208ENST00000498223 IGHV3-64A0A075B6Q5 118 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 IGLV5-52A0A0A0MRZ9 124 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 C11orf86A6NJI1 115 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 DPM2O94777 84 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 PRSS2P07478 247 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 SPINK8P0C7L1 97 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 ZNF22P17026 224 aaPredicted RBP7.51□□□□□ -1.21
CTTN-208ENST00000498223 FUSP35637 526 aaKnown RBP eCLIP7.51□□□□□ -1.21
CTTN-208ENST00000498223 SPAG11BQ08648 103 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 PET117Q6UWS5 81 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 LINC00526Q96FQ7 95 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 PKHD1P08F94 4074 aa7.51□□□□□ -1.21
CTTN-208ENST00000498223 GVQW2A0A096LPI5 108 aaPredicted RBP7.5□□□□□ -1.21
CTTN-208ENST00000498223 C20orf202A1L168 122 aa7.5□□□□□ -1.21
CTTN-208ENST00000498223 LINC01561Q8N1V8 128 aa7.5□□□□□ -1.21
CTTN-208ENST00000498223 OR10D4PQ8NGN7 298 aa7.5□□□□□ -1.21
CTTN-208ENST00000498223 NTN5Q8WTR8 489 aaPredicted RBP7.5□□□□□ -1.21
CTTN-208ENST00000498223 HIST1H2BLQ99880 126 aa7.5□□□□□ -1.21
CTTN-208ENST00000498223 DNAH11Q96DT5 4516 aa7.5□□□□□ -1.21
CTTN-208ENST00000498223 IGLV5-45A0A087WSX0 123 aa7.49□□□□□ -1.21
CTTN-208ENST00000498223 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.49□□□□□ -1.21
CTTN-208ENST00000498223 IGKCP01834 107 aa7.49□□□□□ -1.21
CTTN-208ENST00000498223 PLNP26678 52 aa7.49□□□□□ -1.21
CTTN-208ENST00000498223 CAMK2N2Q96S95 79 aa7.49□□□□□ -1.21
CTTN-208ENST00000498223 PGPEP1Q9NXJ5 209 aa7.49□□□□□ -1.21
CTTN-208ENST00000498223 SMIM1B2RUZ4 78 aa7.48□□□□□ -1.21
CTTN-208ENST00000498223 KRTAP10-2P60368 255 aa7.48□□□□□ -1.21
CTTN-208ENST00000498223 C6orf226Q5I0X4 101 aa7.48□□□□□ -1.21
CTTN-208ENST00000498223 C16orf90A8MZG2 172 aa7.47□□□□□ -1.21
CTTN-208ENST00000498223 CKS1BP61024 79 aa7.47□□□□□ -1.21
CTTN-208ENST00000498223 HERVK_113P61574 105 aa7.47□□□□□ -1.21
CTTN-208ENST00000498223 SYCNQ0VAF6 134 aa7.47□□□□□ -1.21
CTTN-208ENST00000498223 CDPF1Q6NVV7 123 aa7.47□□□□□ -1.21
CTTN-208ENST00000498223 PKD1P98161 4303 aa7.46□□□□□ -1.22
CTTN-208ENST00000498223 NDUFA1O15239 70 aa7.46□□□□□ -1.22
CTTN-208ENST00000498223 LINC01545Q5VT33 79 aa7.46□□□□□ -1.22
CTTN-208ENST00000498223 Q8IZM0 81 aa7.46□□□□□ -1.22
CTTN-208ENST00000498223 COX7B2Q8TF08 81 aa7.46□□□□□ -1.22
CTTN-208ENST00000498223 C2orf48Q96LS8 159 aa7.46□□□□□ -1.22
CTTN-208ENST00000498223 CARD19Q96LW7 228 aa7.46□□□□□ -1.22
CTTN-208ENST00000498223 TMEM223A0PJW6 202 aa7.45□□□□□ -1.22
CTTN-208ENST00000498223 GCSHP23434 173 aa7.45□□□□□ -1.22
CTTN-208ENST00000498223 LINC01620Q4KN68 170 aa7.45□□□□□ -1.22
CTTN-208ENST00000498223 DYNC1H1Q14204 4646 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms