RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 CXCL5P42830 114 aa5.9□□□□□ -1.47
HLA-DMB-262ENST00000498020 TP73-AS1Q9UF72 201 aa5.9□□□□□ -1.47
HLA-DMB-262ENST00000498020 TRBV6-5A0A0K0K1A5 114 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 PRO0255Q9UI72 69 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 TRBV10-1A0A0K0K1A3 114 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 LINC01546A6NGU7 62 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 FSHBP01225 129 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 PROK1P58294 105 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 COX7B2Q8TF08 81 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 NDUFS5O43920 106 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 TRAV26-1A0A087WT03 109 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 A0A096LNT2 108 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 A4D1N5 150 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 GAGE12HA6NDE8 117 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 NDUFB1O75438 58 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 NEXN-AS1Q8NBZ9 246 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 TTTY13Q9BZ97 58 aa5.89□□□□□ -1.47
HLA-DMB-262ENST00000498020 E9PLD3 99 aa5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 ACYP1P07311 99 aa5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 POLR2KP53803 58 aaKnown RBP5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 C2orf91Q6ZV80 131 aa5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 RPL39P62891 51 aaKnown RBP5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 SPAG11BQ08648 103 aa5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 TMEM263Q8WUH6 116 aaKnown RBP5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 KLK12Q9UKR0 248 aa5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 H3BQ85 93 aa5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 CCL25O15444 150 aa5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 TRACP01848 142 aa5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 Q8N2B8 174 aa5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 VSIG2Q96IQ7 327 aa5.88□□□□□ -1.47
HLA-DMB-262ENST00000498020 TRAV10A0A0B4J240 114 aa5.87□□□□□ -1.47
HLA-DMB-262ENST00000498020 TRBV27A0A0K0K1C4 114 aa5.87□□□□□ -1.47
HLA-DMB-262ENST00000498020 M0QY20 66 aa5.87□□□□□ -1.47
HLA-DMB-262ENST00000498020 NHLRC4P0CG21 123 aaPredicted RBP5.87□□□□□ -1.47
HLA-DMB-262ENST00000498020 MUSTN1Q8IVN3 82 aa5.87□□□□□ -1.47
HLA-DMB-262ENST00000498020 C20orf203Q8NBC4 194 aa5.87□□□□□ -1.47
HLA-DMB-262ENST00000498020 WWC2-AS2Q96NR7 200 aa5.87□□□□□ -1.47
HLA-DMB-262ENST00000498020 IGKV2D-26A0A0A0MRZ7 120 aa5.87□□□□□ -1.47
HLA-DMB-262ENST00000498020 CRYGDP07320 174 aa5.87□□□□□ -1.47
HLA-DMB-262ENST00000498020 HIVEP1P15822 2718 aa5.87□□□□□ -1.47
HLA-DMB-262ENST00000498020 UBE2AP49459 152 aa5.86□□□□□ -1.47
HLA-DMB-262ENST00000498020 C11orf86A6NJI1 115 aa5.86□□□□□ -1.47
HLA-DMB-262ENST00000498020 CYSRT1A8MQ03 144 aa5.86□□□□□ -1.47
HLA-DMB-262ENST00000498020 FXYD2P54710 66 aa5.86□□□□□ -1.47
HLA-DMB-262ENST00000498020 NUPR2A6NF83 97 aa5.86□□□□□ -1.47
HLA-DMB-262ENST00000498020 RS1O15537 224 aa5.86□□□□□ -1.47
HLA-DMB-262ENST00000498020 C4orf48Q5BLP8 95 aa5.85□□□□□ -1.47
HLA-DMB-262ENST00000498020 PIK3CD-AS1Q5SR53 167 aa5.85□□□□□ -1.47
HLA-DMB-262ENST00000498020 IGKV2-24A0A0C4DH68 120 aa5.85□□□□□ -1.47
HLA-DMB-262ENST00000498020 NREPQ16612 68 aa5.85□□□□□ -1.47
HLA-DMB-262ENST00000498020 KIF25-AS1Q9Y6Z4 181 aa5.85□□□□□ -1.47
HLA-DMB-262ENST00000498020 RBM3P98179 157 aaKnown RBP5.85□□□□□ -1.47
HLA-DMB-262ENST00000498020 JMJD7-PLA2G4BH0Y9G9 81 aa5.84□□□□□ -1.47
HLA-DMB-262ENST00000498020 LECT2O14960 151 aa5.84□□□□□ -1.47
HLA-DMB-262ENST00000498020 LINC01620Q4KN68 170 aa5.84□□□□□ -1.47
HLA-DMB-262ENST00000498020 DIRC1Q969H9 104 aa5.84□□□□□ -1.47
HLA-DMB-262ENST00000498020 ADGRG4Q8IZF6 3080 aa5.84□□□□□ -1.47
HLA-DMB-262ENST00000498020 AGRNO00468 2067 aa5.84□□□□□ -1.47
HLA-DMB-262ENST00000498020 IGHV4-28A0A0C4DH34 117 aa5.84□□□□□ -1.48
HLA-DMB-262ENST00000498020 TMEM258P61165 79 aa5.84□□□□□ -1.48
HLA-DMB-262ENST00000498020 MUC7Q8TAX7 377 aa5.84□□□□□ -1.48
HLA-DMB-262ENST00000498020 NIPBLQ6KC79 2804 aaeCLIP5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 ZFHX4Q86UP3 3567 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 MP68P56378 58 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 MIR7-3HGQ8N6C7 128 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 LINC00315P59091 139 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 TEN1Q86WV5 123 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 DAND5Q8N907 189 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 A0A1B0GX51 115 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 SMIM9A6NGZ8 99 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 P0DMU3 169 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 FAM231AP0DMU4 169 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 FAM231CP0DMU5 169 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 C14orf177Q52M58 125 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 MAPKAPK5-AS1Q8N8E1 139 aa5.83□□□□□ -1.48
HLA-DMB-262ENST00000498020 IGIPA6NJ69 53 aa5.82□□□□□ -1.48
HLA-DMB-262ENST00000498020 ZNF575Q86XF7 245 aa5.82□□□□□ -1.48
HLA-DMB-262ENST00000498020 MIFP14174 115 aa5.82□□□□□ -1.48
HLA-DMB-262ENST00000498020 CFAP126Q5VTH2 177 aa5.82□□□□□ -1.48
HLA-DMB-262ENST00000498020 H3BT86 120 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 TSHBP01222 138 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 HIGD2BQ4VC39 106 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 A0A0B4J2C4 111 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 PDE6GP18545 87 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 ODF3L2Q3SX64 289 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 PYGO1Q9Y3Y4 419 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 LYRM9A8MSI8 78 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 Q6ZTI0 123 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 IGLV4-3A0A075B6K6 122 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 UFSP1Q6NVU6 142 aa5.81□□□□□ -1.48
HLA-DMB-262ENST00000498020 NCR3O14931 201 aa5.8□□□□□ -1.48
HLA-DMB-262ENST00000498020 C16orf95Q9H693 158 aa5.8□□□□□ -1.48
HLA-DMB-262ENST00000498020 PTH2Q96A98 100 aa5.8□□□□□ -1.48
HLA-DMB-262ENST00000498020 CLUHP3Q96NS8 147 aa5.8□□□□□ -1.48
HLA-DMB-262ENST00000498020 Q6ZUT4 128 aa5.8□□□□□ -1.48
HLA-DMB-262ENST00000498020 LINC00467Q9BRT7 94 aa5.8□□□□□ -1.48
HLA-DMB-262ENST00000498020 TMEM256-PLSCR3K7ERE1 68 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms