RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 IGIPA6NJ69 53 aa6.34□□□□□ -1.39
CALD1-223ENST00000496024 ZNF561-AS1K7EIQ3 104 aa6.34□□□□□ -1.39
CALD1-223ENST00000496024 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.39
CALD1-223ENST00000496024 Q6ZSA8 131 aa6.34□□□□□ -1.39
CALD1-223ENST00000496024 Q8N1X5 172 aa6.34□□□□□ -1.39
CALD1-223ENST00000496024 SCGB3A1Q96QR1 104 aa6.34□□□□□ -1.39
CALD1-223ENST00000496024 C2orf88Q9BSF0 95 aa6.34□□□□□ -1.39
CALD1-223ENST00000496024 KRTAP4-5Q9BYR2 181 aa6.34□□□□□ -1.39
CALD1-223ENST00000496024 FAT1Q14517 4588 aa6.33□□□□□ -1.4
CALD1-223ENST00000496024 IGHV3-64A0A075B6Q5 118 aa6.33□□□□□ -1.4
CALD1-223ENST00000496024 LINC01546A6NGU7 62 aa6.33□□□□□ -1.4
CALD1-223ENST00000496024 COX6A2Q02221 97 aa6.33□□□□□ -1.4
CALD1-223ENST00000496024 LINC00242Q5T6M2 205 aa6.33□□□□□ -1.4
CALD1-223ENST00000496024 LINC00173Q6ZV60 143 aa6.33□□□□□ -1.4
CALD1-223ENST00000496024 AMELXQ99217 191 aa6.33□□□□□ -1.4
CALD1-223ENST00000496024 IGLV4-69A0A075B6H9 119 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 IGHV3OR16-9A0A0B4J2B5 98 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 APOMO95445 188 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 LINC00614P0C842 121 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 UBE2D1P51668 147 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 PMCHL1Q16048 86 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 PAPPA-AS1Q5QFB9 102 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 SDIM1Q6ZPB5 146 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 SCXQ7RTU7 201 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 ERASQ7Z444 233 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 ORAOV1Q8WV07 137 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 URB1-AS1Q96HZ7 61 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 TIMM17AQ99595 171 aa6.32□□□□□ -1.4
CALD1-223ENST00000496024 PCLOQ9Y6V0 5065 aa6.31□□□□□ -1.4
CALD1-223ENST00000496024 PANO1I0J062 215 aa6.31□□□□□ -1.4
CALD1-223ENST00000496024 SCO1O75880 301 aa6.31□□□□□ -1.4
CALD1-223ENST00000496024 CHTF8P0CG12 524 aa6.31□□□□□ -1.4
CALD1-223ENST00000496024 SPAG11BQ08648 103 aa6.31□□□□□ -1.4
CALD1-223ENST00000496024 SYCNQ0VAF6 134 aa6.31□□□□□ -1.4
CALD1-223ENST00000496024 DPH3Q96FX2 82 aa6.31□□□□□ -1.4
CALD1-223ENST00000496024 CARD19Q96LW7 228 aa6.31□□□□□ -1.4
CALD1-223ENST00000496024 CHAC1Q9BUX1 264 aa6.31□□□□□ -1.4
CALD1-223ENST00000496024 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
CALD1-223ENST00000496024 IGKV2-24A0A0C4DH68 120 aa6.3□□□□□ -1.4
CALD1-223ENST00000496024 A0A0J9YXV3 536 aa6.3□□□□□ -1.4
CALD1-223ENST00000496024 EPM2AB3EWF7 344 aa6.3□□□□□ -1.4
CALD1-223ENST00000496024 TRGC2P03986 189 aa6.3□□□□□ -1.4
CALD1-223ENST00000496024 NPSP0C0P6 89 aa6.3□□□□□ -1.4
CALD1-223ENST00000496024 RAB5BP61020 215 aa6.3□□□□□ -1.4
CALD1-223ENST00000496024 CIRBP-AS1Q8TBR5 109 aa6.3□□□□□ -1.4
CALD1-223ENST00000496024 CAMK2N2Q96S95 79 aa6.3□□□□□ -1.4
CALD1-223ENST00000496024 A0A087WZ39 114 aa6.29□□□□□ -1.4
CALD1-223ENST00000496024 A0A096LNJ9 63 aa6.29□□□□□ -1.4
CALD1-223ENST00000496024 LINC01549A6NIU2 74 aa6.29□□□□□ -1.4
CALD1-223ENST00000496024 COLCA2A8K830 154 aa6.29□□□□□ -1.4
CALD1-223ENST00000496024 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.29□□□□□ -1.4
CALD1-223ENST00000496024 NDUFA6P56556 154 aa6.29□□□□□ -1.4
CALD1-223ENST00000496024 Q5VSD8 79 aa6.29□□□□□ -1.4
CALD1-223ENST00000496024 Q6ZRU5 148 aa6.29□□□□□ -1.4
CALD1-223ENST00000496024 GEMIN7Q9H840 131 aaKnown RBP6.29□□□□□ -1.4
CALD1-223ENST00000496024 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
CALD1-223ENST00000496024 HBDP02042 147 aa6.28□□□□□ -1.4
CALD1-223ENST00000496024 BAGE3Q86Y29 109 aa6.28□□□□□ -1.4
CALD1-223ENST00000496024 LINC00528Q8N1L1 170 aa6.28□□□□□ -1.4
CALD1-223ENST00000496024 OR10D4PQ8NGN7 298 aa6.28□□□□□ -1.4
CALD1-223ENST00000496024 SRRM2Q9UQ35 2752 aaKnown RBP6.27□□□□□ -1.41
CALD1-223ENST00000496024 A0A096LNI7 61 aa6.27□□□□□ -1.41
CALD1-223ENST00000496024 ATP6V1G1O75348 118 aa6.27□□□□□ -1.41
CALD1-223ENST00000496024 HERVK_113P63121 156 aa6.27□□□□□ -1.41
CALD1-223ENST00000496024 PMVKQ15126 192 aa6.27□□□□□ -1.41
CALD1-223ENST00000496024 MAJINQ3KP22 176 aa6.27□□□□□ -1.41
CALD1-223ENST00000496024 LINC00469Q8N7U9 141 aa6.27□□□□□ -1.41
CALD1-223ENST00000496024 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
CALD1-223ENST00000496024 PACRGQ96M98 296 aaPredicted RBP6.27□□□□□ -1.41
CALD1-223ENST00000496024 CST9LQ9H4G1 147 aa6.27□□□□□ -1.41
CALD1-223ENST00000496024 TOMM7Q9P0U1 55 aa6.27□□□□□ -1.41
CALD1-223ENST00000496024 CDKN2A-AS1Q9UH64 79 aa6.27□□□□□ -1.41
CALD1-223ENST00000496024 A0A087WYN8 130 aa6.26□□□□□ -1.41
CALD1-223ENST00000496024 NDUFA1O15239 70 aa6.26□□□□□ -1.41
CALD1-223ENST00000496024 SEC11AP67812 179 aa6.26□□□□□ -1.41
CALD1-223ENST00000496024 GAGE2BQ13066 116 aa6.26□□□□□ -1.41
CALD1-223ENST00000496024 PDZD11Q5EBL8 140 aa6.26□□□□□ -1.41
CALD1-223ENST00000496024 C10orf25Q5T742 122 aa6.26□□□□□ -1.41
CALD1-223ENST00000496024 UNQ6190/PRO20217Q6UXQ8 127 aa6.26□□□□□ -1.41
CALD1-223ENST00000496024 FAM19A3Q7Z5A8 133 aa6.26□□□□□ -1.41
CALD1-223ENST00000496024 LOC107984640A0A0U1RRK4 108 aa6.25□□□□□ -1.41
CALD1-223ENST00000496024 ATP5LO75964 103 aa6.25□□□□□ -1.41
CALD1-223ENST00000496024 PRSS2P07478 247 aa6.25□□□□□ -1.41
CALD1-223ENST00000496024 RPL18AQ02543 176 aaKnown RBP6.25□□□□□ -1.41
CALD1-223ENST00000496024 C2orf82Q6UX34 121 aa6.25□□□□□ -1.41
CALD1-223ENST00000496024 FAM19A2Q8N3H0 131 aa6.25□□□□□ -1.41
CALD1-223ENST00000496024 SPACA4Q8TDM5 124 aa6.25□□□□□ -1.41
CALD1-223ENST00000496024 CHCHD1Q96BP2 118 aaKnown RBP6.25□□□□□ -1.41
CALD1-223ENST00000496024 TINCRA0A1B0GVN0 87 aa6.24□□□□□ -1.41
CALD1-223ENST00000496024 HSBP1O75506 76 aa6.24□□□□□ -1.41
CALD1-223ENST00000496024 CIRBPQ14011 172 aaKnown RBP6.24□□□□□ -1.41
CALD1-223ENST00000496024 KIAA0087Q14695 138 aa6.24□□□□□ -1.41
CALD1-223ENST00000496024 C6orf226Q5I0X4 101 aa6.24□□□□□ -1.41
CALD1-223ENST00000496024 LINC01561Q8N1V8 128 aa6.24□□□□□ -1.41
CALD1-223ENST00000496024 STPG4Q8N801 248 aa6.24□□□□□ -1.41
CALD1-223ENST00000496024 PKIGQ9Y2B9 76 aa6.24□□□□□ -1.41
CALD1-223ENST00000496024 FLG2Q5D862 2391 aaPredicted RBP6.24□□□□□ -1.41
CALD1-223ENST00000496024 SERF1AO75920 110 aa6.23□□□□□ -1.41
CALD1-223ENST00000496024 PLA2G1BP04054 148 aaKnown RBP6.23□□□□□ -1.41
CALD1-223ENST00000496024 SPINK8P0C7L1 97 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms