RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
RAPGEF3-215ENST00000495953 LRCOL1A6NCL2 159 aa10.23□□□□□ -0.77
RAPGEF3-215ENST00000495953 FABP4P15090 132 aa10.23□□□□□ -0.77
RAPGEF3-215ENST00000495953 HERVK_113P63121 156 aa10.23□□□□□ -0.77
RAPGEF3-215ENST00000495953 C14orf177Q52M58 125 aa10.23□□□□□ -0.77
RAPGEF3-215ENST00000495953 CFAP161Q6P656 301 aa10.23□□□□□ -0.77
RAPGEF3-215ENST00000495953 DYNC1H1Q14204 4646 aaKnown RBP10.22□□□□□ -0.77
RAPGEF3-215ENST00000495953 IGHV3OR16-9A0A0B4J2B5 98 aa10.22□□□□□ -0.77
RAPGEF3-215ENST00000495953 TINCRA0A1B0GVN0 87 aa10.22□□□□□ -0.77
RAPGEF3-215ENST00000495953 COX7A2LO14548 114 aa10.22□□□□□ -0.77
RAPGEF3-215ENST00000495953 TNP2Q05952 138 aa10.22□□□□□ -0.77
RAPGEF3-215ENST00000495953 PKD1P98161 4303 aa10.21□□□□□ -0.77
RAPGEF3-215ENST00000495953 A0A087WTM6 91 aa10.21□□□□□ -0.77
RAPGEF3-215ENST00000495953 LINC01561Q8N1V8 128 aa10.21□□□□□ -0.77
RAPGEF3-215ENST00000495953 MAP1LC3CQ9BXW4 147 aa10.21□□□□□ -0.77
RAPGEF3-215ENST00000495953 GEMIN7Q9H840 131 aaKnown RBP10.21□□□□□ -0.77
RAPGEF3-215ENST00000495953 A0A0J9YXV3 536 aa10.2□□□□□ -0.78
RAPGEF3-215ENST00000495953 USP17L23D6RBM5 183 aa10.2□□□□□ -0.78
RAPGEF3-215ENST00000495953 KIAA1109Q2LD37 5005 aa10.2□□□□□ -0.78
RAPGEF3-215ENST00000495953 DNAH11Q96DT5 4516 aa10.19□□□□□ -0.78
RAPGEF3-215ENST00000495953 A0A087WZ39 114 aa10.19□□□□□ -0.78
RAPGEF3-215ENST00000495953 IGHV1-58A0A0C4DH39 117 aa10.19□□□□□ -0.78
RAPGEF3-215ENST00000495953 APOMO95445 188 aa10.19□□□□□ -0.78
RAPGEF3-215ENST00000495953 IGLC3P0DOY3 106 aa10.19□□□□□ -0.78
RAPGEF3-215ENST00000495953 MALP21145 153 aa10.19□□□□□ -0.78
RAPGEF3-215ENST00000495953 COX6A2Q02221 97 aa10.19□□□□□ -0.78
RAPGEF3-215ENST00000495953 CHTOPQ9Y3Y2 248 aaKnown RBP10.19□□□□□ -0.78
RAPGEF3-215ENST00000495953 S100A2P29034 98 aa10.18□□□□□ -0.78
RAPGEF3-215ENST00000495953 C5orf38Q86SI9 138 aa10.18□□□□□ -0.78
RAPGEF3-215ENST00000495953 HIST3H2BBQ8N257 126 aa10.18□□□□□ -0.78
RAPGEF3-215ENST00000495953 PKHD1P08F94 4074 aa10.18□□□□□ -0.78
RAPGEF3-215ENST00000495953 IGLV5-45A0A087WSX0 123 aa10.17□□□□□ -0.78
RAPGEF3-215ENST00000495953 A0A1B0GVY2 172 aa10.17□□□□□ -0.78
RAPGEF3-215ENST00000495953 C5orf52A6NGY3 159 aa10.17□□□□□ -0.78
RAPGEF3-215ENST00000495953 F8VRH5 84 aa10.17□□□□□ -0.78
RAPGEF3-215ENST00000495953 SPATA12Q7Z6I5 190 aa10.17□□□□□ -0.78
RAPGEF3-215ENST00000495953 Q8N814 137 aa10.17□□□□□ -0.78
RAPGEF3-215ENST00000495953 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 LECT2O14960 151 aa10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 SNRPEP62304 92 aaKnown RBP10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 WFDC2Q14508 124 aa10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 ODF1Q14990 250 aa10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 C15orf56Q8N910 161 aa10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 OR10D4PQ8NGN7 298 aa10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 NTN5Q8WTR8 489 aaPredicted RBP10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 CHAC1Q9BUX1 264 aa10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 KRTAP17-1Q9BYP8 105 aa10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 CDKN2A-AS1Q9UH64 79 aa10.16□□□□□ -0.78
RAPGEF3-215ENST00000495953 GVQW2A0A096LPI5 108 aaPredicted RBP10.15□□□□□ -0.78
RAPGEF3-215ENST00000495953 H3BRM9 83 aa10.15□□□□□ -0.78
RAPGEF3-215ENST00000495953 SYS1-DBNDD2H3BUS1 97 aa10.15□□□□□ -0.78
RAPGEF3-215ENST00000495953 PET117Q6UWS5 81 aa10.15□□□□□ -0.78
RAPGEF3-215ENST00000495953 LINC00469Q8N7U9 141 aa10.15□□□□□ -0.78
RAPGEF3-215ENST00000495953 IGHV3-64A0A075B6Q5 118 aa10.14□□□□□ -0.79
RAPGEF3-215ENST00000495953 H0Y8G0 127 aa10.14□□□□□ -0.79
RAPGEF3-215ENST00000495953 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
RAPGEF3-215ENST00000495953 MRPL35Q9NZE8 188 aaKnown RBP10.14□□□□□ -0.79
RAPGEF3-215ENST00000495953 hDV102S1A0JD36 115 aa10.13□□□□□ -0.79
RAPGEF3-215ENST00000495953 C11orf86A6NJI1 115 aa10.13□□□□□ -0.79
RAPGEF3-215ENST00000495953 ZNF561-AS1K7EIQ3 104 aa10.13□□□□□ -0.79
RAPGEF3-215ENST00000495953 PLNP26678 52 aa10.13□□□□□ -0.79
RAPGEF3-215ENST00000495953 CDPF1Q6NVV7 123 aa10.13□□□□□ -0.79
RAPGEF3-215ENST00000495953 HIST1H2BLQ99880 126 aa10.13□□□□□ -0.79
RAPGEF3-215ENST00000495953 F8WDY8 70 aa10.12□□□□□ -0.79
RAPGEF3-215ENST00000495953 C3orf79P0CE67 100 aa10.12□□□□□ -0.79
RAPGEF3-215ENST00000495953 ZNF22P17026 224 aaPredicted RBP10.12□□□□□ -0.79
RAPGEF3-215ENST00000495953 ORAOV1Q8WV07 137 aa10.12□□□□□ -0.79
RAPGEF3-215ENST00000495953 DPM2O94777 84 aa10.11□□□□□ -0.79
RAPGEF3-215ENST00000495953 AKR1D1P51857 326 aa10.11□□□□□ -0.79
RAPGEF3-215ENST00000495953 KRTDAPP60985 99 aa10.11□□□□□ -0.79
RAPGEF3-215ENST00000495953 LINC01545Q5VT33 79 aa10.11□□□□□ -0.79
RAPGEF3-215ENST00000495953 C2orf48Q96LS8 159 aa10.11□□□□□ -0.79
RAPGEF3-215ENST00000495953 CNBPP62633 177 aaKnown RBP10.1□□□□□ -0.79
RAPGEF3-215ENST00000495953 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
RAPGEF3-215ENST00000495953 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
RAPGEF3-215ENST00000495953 PCLOQ9Y6V0 5065 aa10.1□□□□□ -0.79
RAPGEF3-215ENST00000495953 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.09□□□□□ -0.79
RAPGEF3-215ENST00000495953 C20orf202A1L168 122 aa10.09□□□□□ -0.79
RAPGEF3-215ENST00000495953 SMIM1B2RUZ4 78 aa10.09□□□□□ -0.79
RAPGEF3-215ENST00000495953 IGKCP01834 107 aa10.09□□□□□ -0.79
RAPGEF3-215ENST00000495953 SPAG11BQ08648 103 aa10.09□□□□□ -0.79
RAPGEF3-215ENST00000495953 Q8IZM0 81 aa10.09□□□□□ -0.79
RAPGEF3-215ENST00000495953 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.08□□□□□ -0.8
RAPGEF3-215ENST00000495953 IGLV5-52A0A0A0MRZ9 124 aa10.08□□□□□ -0.8
RAPGEF3-215ENST00000495953 PRSS2P07478 247 aa10.08□□□□□ -0.8
RAPGEF3-215ENST00000495953 TMA7Q9Y2S6 64 aaKnown RBP10.08□□□□□ -0.8
RAPGEF3-215ENST00000495953 IGLV5-39A0A0G2JS06 123 aa10.07□□□□□ -0.8
RAPGEF3-215ENST00000495953 SPINK8P0C7L1 97 aa10.07□□□□□ -0.8
RAPGEF3-215ENST00000495953 KRTAP10-2P60368 255 aa10.07□□□□□ -0.8
RAPGEF3-215ENST00000495953 KIAA0087Q14695 138 aa10.07□□□□□ -0.8
RAPGEF3-215ENST00000495953 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
RAPGEF3-215ENST00000495953 C6orf226Q5I0X4 101 aa10.06□□□□□ -0.8
RAPGEF3-215ENST00000495953 PMCHL2Q9BQD1 86 aa10.06□□□□□ -0.8
RAPGEF3-215ENST00000495953 CXCL5P42830 114 aa10.05□□□□□ -0.8
RAPGEF3-215ENST00000495953 SYCNQ0VAF6 134 aa10.05□□□□□ -0.8
RAPGEF3-215ENST00000495953 C9orf163Q8N9P6 203 aa10.05□□□□□ -0.8
RAPGEF3-215ENST00000495953 COX7B2Q8TF08 81 aa10.05□□□□□ -0.8
RAPGEF3-215ENST00000495953 CAMK2N2Q96S95 79 aa10.05□□□□□ -0.8
RAPGEF3-215ENST00000495953 TOMM7Q9P0U1 55 aa10.05□□□□□ -0.8
RAPGEF3-215ENST00000495953 DNAH5Q8TE73 4624 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms