RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ZNF563Q8TA94 476 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 TSKUQ8WUA8 353 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 C10orf82Q8WW14 230 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 PSMF1Q92530 271 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 SORL1Q92673 2214 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 CR1P17927 2039 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 hDV103S1A0JD37 113 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 ROMO1P60602 79 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 ELOBQ15370 118 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 NNATQ16517 81 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 Q1T7F1 81 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 DPPA3Q6W0C5 159 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 FAM19A2Q8N3H0 131 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 C9orf163Q8N9P6 203 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 ATP6V0E2Q8NHE4 81 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 PATE1Q8WXA2 126 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 SPTSSAQ969W0 71 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 PMCHL2Q9BQD1 86 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 DPH3P1Q9H4G8 78 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 TMEM242Q9NWH2 141 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 LHFPL6Q9Y693 200 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 DOPEY1Q5JWR5 2465 aa2.14□□□□□ -2.07
CCDC39-207ENST00000495817 HIVEP1P15822 2718 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 KNL1Q8NG31 2342 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 C2CD3Q4AC94 2353 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 APCP25054 2843 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 IGHV1-24A0A0C4DH33 117 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 LOC107984156A0A0G2JMH3 177 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 SPTY2D1-AS1A0A0U1RR47 76 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 GNGT2O14610 69 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 NUPR1O60356 82 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 SFT2D2O95562 160 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 CYB5AP00167 134 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 APOC3P02656 99 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 ESRGQ1W209 222 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 DEFB109BQ30KR1 87 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 KRTAP21-3Q3LHN1 58 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 S100A7L2Q5SY68 101 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 C1orf134Q5TEV5 83 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 ATP11AUNQ6ZP68 121 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 ARL17AQ8IVW1 177 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 LINC00301Q8NCQ3 95 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 LINC00467Q9BRT7 94 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 SLC50A1Q9BRV3 221 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 MUC4Q99102 2169 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 DCHS2Q6V1P9 2916 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 ANKRD36A6QL64 1941 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 ITPR3Q14573 2671 aa2.13□□□□□ -2.07
CCDC39-207ENST00000495817 SNRNP200O75643 2136 aaKnown RBP2.12□□□□□ -2.07
CCDC39-207ENST00000495817 NBASA2RRP1 2371 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 F8P00451 2351 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 UBE2L5PA0A1B0GUS4 154 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 IGLC7A0M8Q6 106 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 M0R233 179 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 LYRM1O43325 122 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 PROSCO94903 275 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 CRPP02741 224 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 PRB4P10163 310 aaPredicted RBP2.12□□□□□ -2.07
CCDC39-207ENST00000495817 UBE2L3P68036 154 aaKnown RBP2.12□□□□□ -2.07
CCDC39-207ENST00000495817 ZNF345Q14585 488 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 ASB16-AS1Q495Z4 193 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 Q6ZQT0 140 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 C20orf78Q9BR46 151 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 AHCTF1Q8WYP5 2266 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 VPS13CQ709C8 3753 aa2.12□□□□□ -2.07
CCDC39-207ENST00000495817 TRAV14DV4A0A0A6YYC5 116 aa2.11□□□□□ -2.07
CCDC39-207ENST00000495817 SSSCA1O60232 199 aa2.11□□□□□ -2.07
CCDC39-207ENST00000495817 PIRTP0C851 137 aa2.11□□□□□ -2.07
CCDC39-207ENST00000495817 MGST1P10620 155 aaKnown RBP2.11□□□□□ -2.07
CCDC39-207ENST00000495817 ATP5EP56381 51 aaPredicted RBP2.11□□□□□ -2.07
CCDC39-207ENST00000495817 RBM3P98179 157 aaKnown RBP2.11□□□□□ -2.07
CCDC39-207ENST00000495817 DEFA5Q01523 94 aa2.11□□□□□ -2.07
CCDC39-207ENST00000495817 C12orf73Q69YU5 71 aa2.11□□□□□ -2.07
CCDC39-207ENST00000495817 C5orf38Q86SI9 138 aa2.11□□□□□ -2.07
CCDC39-207ENST00000495817 LY96Q9Y6Y9 160 aa2.11□□□□□ -2.07
CCDC39-207ENST00000495817 SETD2Q9BYW2 2564 aaPredicted RBP2.11□□□□□ -2.07
CCDC39-207ENST00000495817 RTTNQ86VV8 2226 aa2.11□□□□□ -2.07
CCDC39-207ENST00000495817 TACC2O95359 2948 aa2.11□□□□□ -2.07
CCDC39-207ENST00000495817 RP1P56715 2156 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 SPTBN1Q01082 2364 aaKnown RBP2.1□□□□□ -2.07
CCDC39-207ENST00000495817 POLQO75417 2590 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 ANK3Q12955 4377 aaKnown RBP2.1□□□□□ -2.07
CCDC39-207ENST00000495817 MTORP42345 2549 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 hADV29S1A0JD25 119 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 C17orf112F2Z3M2 114 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 ADCYAP1P18509 176 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 CBLN1P23435 193 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 SSR2P43308 183 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 LINC00269Q8N2A0 174 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 Q96M85 177 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 S100A13Q99584 98 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 UQCR10Q9UDW1 63 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 CUBNO60494 3623 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 CREBBPQ92793 2442 aa2.1□□□□□ -2.07
CCDC39-207ENST00000495817 NAV3Q8IVL0 2385 aa2.09□□□□□ -2.07
CCDC39-207ENST00000495817 TRBV6-5A0A0K0K1A5 114 aa2.09□□□□□ -2.07
CCDC39-207ENST00000495817 TRBV7-7A0A0K0K1E9 115 aa2.09□□□□□ -2.07
CCDC39-207ENST00000495817 F8W1H4 67 aa2.09□□□□□ -2.07
CCDC39-207ENST00000495817 PDCD5O14737 125 aa2.09□□□□□ -2.07
CCDC39-207ENST00000495817 IGKCP01834 107 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms