RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 APOMO95445 188 aa13.02□□□□□ -0.33
LMO4-204ENST00000495705 C5orf38Q86SI9 138 aa13.02□□□□□ -0.33
LMO4-204ENST00000495705 CHCHD1Q96BP2 118 aaKnown RBP13.02□□□□□ -0.33
LMO4-204ENST00000495705 A0A096LNJ9 63 aa13.01□□□□□ -0.33
LMO4-204ENST00000495705 LINC00242Q5T6M2 205 aa13.01□□□□□ -0.33
LMO4-204ENST00000495705 C9orf163Q8N9P6 203 aa13.01□□□□□ -0.33
LMO4-204ENST00000495705 S100A1P23297 94 aa13□□□□□ -0.33
LMO4-204ENST00000495705 SEC11AP67812 179 aa13□□□□□ -0.33
LMO4-204ENST00000495705 ZC2HC1BQ5TFG8 222 aa13□□□□□ -0.33
LMO4-204ENST00000495705 FAM19A3Q7Z5A8 133 aa13□□□□□ -0.33
LMO4-204ENST00000495705 BAGE3Q86Y29 109 aa13□□□□□ -0.33
LMO4-204ENST00000495705 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.99□□□□□ -0.33
LMO4-204ENST00000495705 ZNF561-AS1K7EIQ3 104 aa12.99□□□□□ -0.33
LMO4-204ENST00000495705 LINC01620Q4KN68 170 aa12.99□□□□□ -0.33
LMO4-204ENST00000495705 PMCHL1Q16048 86 aa12.98□□□□□ -0.33
LMO4-204ENST00000495705 RYR1P21817 5038 aa12.98□□□□□ -0.33
LMO4-204ENST00000495705 SLPIP03973 132 aa12.97□□□□□ -0.33
LMO4-204ENST00000495705 PDZD11Q5EBL8 140 aa12.97□□□□□ -0.33
LMO4-204ENST00000495705 OR10D4PQ8NGN7 298 aa12.97□□□□□ -0.33
LMO4-204ENST00000495705 APOBP04114 4563 aaKnown RBP12.97□□□□□ -0.33
LMO4-204ENST00000495705 A0A087WZ39 114 aa12.96□□□□□ -0.33
LMO4-204ENST00000495705 ATP6V1G1O75348 118 aa12.96□□□□□ -0.33
LMO4-204ENST00000495705 ATP5LO75964 103 aa12.96□□□□□ -0.33
LMO4-204ENST00000495705 HERVK_113P63121 156 aa12.96□□□□□ -0.33
LMO4-204ENST00000495705 COX6A2Q02221 97 aa12.96□□□□□ -0.33
LMO4-204ENST00000495705 PMVKQ15126 192 aa12.96□□□□□ -0.33
LMO4-204ENST00000495705 Q6ZSA8 131 aa12.96□□□□□ -0.33
LMO4-204ENST00000495705 IGHV3-64A0A075B6Q5 118 aa12.95□□□□□ -0.34
LMO4-204ENST00000495705 HSBP1O75506 76 aa12.95□□□□□ -0.34
LMO4-204ENST00000495705 LINC01561Q8N1V8 128 aa12.95□□□□□ -0.34
LMO4-204ENST00000495705 CST9LQ9H4G1 147 aa12.95□□□□□ -0.34
LMO4-204ENST00000495705 SPAG11BQ08648 103 aa12.94□□□□□ -0.34
LMO4-204ENST00000495705 ORAOV1Q8WV07 137 aa12.94□□□□□ -0.34
LMO4-204ENST00000495705 GEMIN7Q9H840 131 aaKnown RBP12.94□□□□□ -0.34
LMO4-204ENST00000495705 IGLV4-69A0A075B6H9 119 aa12.93□□□□□ -0.34
LMO4-204ENST00000495705 XGP55808 180 aa12.93□□□□□ -0.34
LMO4-204ENST00000495705 LINC00526Q96FQ7 95 aa12.93□□□□□ -0.34
LMO4-204ENST00000495705 C2orf48Q96LS8 159 aa12.93□□□□□ -0.34
LMO4-204ENST00000495705 FAM30AQ9NZY2 134 aa12.93□□□□□ -0.34
LMO4-204ENST00000495705 HERC2O95714 4834 aa12.93□□□□□ -0.34
LMO4-204ENST00000495705 A0A0J9YXV3 536 aa12.92□□□□□ -0.34
LMO4-204ENST00000495705 SYCNQ0VAF6 134 aa12.92□□□□□ -0.34
LMO4-204ENST00000495705 CARD19Q96LW7 228 aa12.92□□□□□ -0.34
LMO4-204ENST00000495705 TINCRA0A1B0GVN0 87 aa12.91□□□□□ -0.34
LMO4-204ENST00000495705 SERF1AO75920 110 aa12.91□□□□□ -0.34
LMO4-204ENST00000495705 SDIM1Q6ZPB5 146 aa12.91□□□□□ -0.34
LMO4-204ENST00000495705 PKIGQ9Y2B9 76 aa12.91□□□□□ -0.34
LMO4-204ENST00000495705 DNAH8Q96JB1 4490 aa12.9□□□□□ -0.34
LMO4-204ENST00000495705 F8WDY8 70 aa12.9□□□□□ -0.34
LMO4-204ENST00000495705 CAMK2N2Q96S95 79 aa12.9□□□□□ -0.34
LMO4-204ENST00000495705 NDUFA6P56556 154 aa12.89□□□□□ -0.35
LMO4-204ENST00000495705 LINC00310P59036 64 aa12.89□□□□□ -0.35
LMO4-204ENST00000495705 CDKN2A-AS1Q9UH64 79 aa12.89□□□□□ -0.35
LMO4-204ENST00000495705 HSPG2P98160 4391 aa12.89□□□□□ -0.35
LMO4-204ENST00000495705 IGLV5-45A0A087WSX0 123 aa12.88□□□□□ -0.35
LMO4-204ENST00000495705 FAM19A2Q8N3H0 131 aa12.88□□□□□ -0.35
LMO4-204ENST00000495705 LINC00469Q8N7U9 141 aa12.88□□□□□ -0.35
LMO4-204ENST00000495705 PACRGQ96M98 296 aaPredicted RBP12.88□□□□□ -0.35
LMO4-204ENST00000495705 HIST1H2BKO60814 126 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 HIST1H2BJP06899 126 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 HIST1H2BOP23527 126 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 HIST1H2BBP33778 126 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 HIST1H2BDP58876 126 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 HIST1H2BCP62807 126 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 HIST2H2BEQ16778 126 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.87□□□□□ -0.35
LMO4-204ENST00000495705 HIST1H2BHQ93079 126 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 HIST1H2BNQ99877 126 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 HIST1H2BMQ99879 126 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 CHAC1Q9BUX1 264 aa12.87□□□□□ -0.35
LMO4-204ENST00000495705 IGLC3P0DOY3 106 aa12.86□□□□□ -0.35
LMO4-204ENST00000495705 Q6ZRU5 148 aa12.86□□□□□ -0.35
LMO4-204ENST00000495705 IFI27L1Q96BM0 104 aa12.86□□□□□ -0.35
LMO4-204ENST00000495705 NDUFA1O15239 70 aa12.85□□□□□ -0.35
LMO4-204ENST00000495705 HAMPP81172 84 aa12.85□□□□□ -0.35
LMO4-204ENST00000495705 KIAA0087Q14695 138 aa12.85□□□□□ -0.35
LMO4-204ENST00000495705 SCXQ7RTU7 201 aa12.85□□□□□ -0.35
LMO4-204ENST00000495705 TRAV12-1A0A0B4J245 112 aa12.84□□□□□ -0.35
LMO4-204ENST00000495705 LEPROTL1O95214 131 aa12.84□□□□□ -0.35
LMO4-204ENST00000495705 PRSS2P07478 247 aa12.84□□□□□ -0.35
LMO4-204ENST00000495705 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
LMO4-204ENST00000495705 H3BRM9 83 aa12.83□□□□□ -0.36
LMO4-204ENST00000495705 CIRBPQ14011 172 aaKnown RBP12.83□□□□□ -0.36
LMO4-204ENST00000495705 RNF151Q2KHN1 245 aa12.83□□□□□ -0.36
LMO4-204ENST00000495705 Q8N1X5 172 aa12.83□□□□□ -0.36
LMO4-204ENST00000495705 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.83□□□□□ -0.36
LMO4-204ENST00000495705 SMIM1B2RUZ4 78 aa12.82□□□□□ -0.36
LMO4-204ENST00000495705 NUPR1O60356 82 aa12.82□□□□□ -0.36
LMO4-204ENST00000495705 Q8IZM0 81 aa12.82□□□□□ -0.36
LMO4-204ENST00000495705 TOMM7Q9P0U1 55 aa12.82□□□□□ -0.36
LMO4-204ENST00000495705 CIRBP-AS1Q8TBR5 109 aa12.81□□□□□ -0.36
LMO4-204ENST00000495705 CHTOPQ9Y3Y2 248 aaKnown RBP12.81□□□□□ -0.36
LMO4-204ENST00000495705 LOC107984640A0A0U1RRK4 108 aa12.8□□□□□ -0.36
LMO4-204ENST00000495705 PANO1I0J062 215 aa12.8□□□□□ -0.36
LMO4-204ENST00000495705 SPACA4Q8TDM5 124 aa12.8□□□□□ -0.36
LMO4-204ENST00000495705 LINC00474Q9P2X8 69 aa12.8□□□□□ -0.36
LMO4-204ENST00000495705 HSPB8Q9UJY1 196 aa12.8□□□□□ -0.36
LMO4-204ENST00000495705 CHTF8P0CG12 524 aa12.79□□□□□ -0.36
LMO4-204ENST00000495705 ZNF22P17026 224 aaPredicted RBP12.79□□□□□ -0.36
LMO4-204ENST00000495705 C6orf226Q5I0X4 101 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms