RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 CLPSL2Q6UWE3 100 aa9.85□□□□□ -0.83
PTPRE-211ENST00000495530 CHTOPQ9Y3Y2 248 aaKnown RBP9.85□□□□□ -0.83
PTPRE-211ENST00000495530 COX11Q9Y6N1 276 aa9.85□□□□□ -0.83
PTPRE-211ENST00000495530 C20orf202A1L168 122 aa9.84□□□□□ -0.83
PTPRE-211ENST00000495530 ZC2HC1BQ5TFG8 222 aa9.84□□□□□ -0.83
PTPRE-211ENST00000495530 OR10D4PQ8NGN7 298 aa9.84□□□□□ -0.83
PTPRE-211ENST00000495530 C1orf43Q9BWL3 253 aa9.84□□□□□ -0.83
PTPRE-211ENST00000495530 FAM19A3Q7Z5A8 133 aa9.83□□□□□ -0.84
PTPRE-211ENST00000495530 NFE4Q86UQ8 179 aa9.83□□□□□ -0.84
PTPRE-211ENST00000495530 TM2D2Q9BX73 214 aa9.83□□□□□ -0.84
PTPRE-211ENST00000495530 GEMIN7Q9H840 131 aaKnown RBP9.83□□□□□ -0.84
PTPRE-211ENST00000495530 TINCRA0A1B0GVN0 87 aa9.82□□□□□ -0.84
PTPRE-211ENST00000495530 F8VRH5 84 aa9.82□□□□□ -0.84
PTPRE-211ENST00000495530 HERVK_113P63121 156 aa9.82□□□□□ -0.84
PTPRE-211ENST00000495530 ODF1Q14990 250 aa9.82□□□□□ -0.84
PTPRE-211ENST00000495530 CHCHD10Q8WYQ3 142 aaPredicted RBP9.82□□□□□ -0.84
PTPRE-211ENST00000495530 Q9HAA7 133 aa9.82□□□□□ -0.84
PTPRE-211ENST00000495530 M0R2N4 97 aa9.81□□□□□ -0.84
PTPRE-211ENST00000495530 IGLC3P0DOY3 106 aa9.81□□□□□ -0.84
PTPRE-211ENST00000495530 PLNP26678 52 aa9.81□□□□□ -0.84
PTPRE-211ENST00000495530 LINC00242Q5T6M2 205 aa9.81□□□□□ -0.84
PTPRE-211ENST00000495530 LINC01545Q5VT33 79 aa9.81□□□□□ -0.84
PTPRE-211ENST00000495530 CD164L2Q6UWJ8 174 aa9.81□□□□□ -0.84
PTPRE-211ENST00000495530 MRPL35Q9NZE8 188 aaKnown RBP9.81□□□□□ -0.84
PTPRE-211ENST00000495530 IGLV10-54A0A075B6I4 117 aa9.8□□□□□ -0.84
PTPRE-211ENST00000495530 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
PTPRE-211ENST00000495530 A0A0J9YXV3 536 aa9.8□□□□□ -0.84
PTPRE-211ENST00000495530 DPM2O94777 84 aa9.8□□□□□ -0.84
PTPRE-211ENST00000495530 Q6ZR54 194 aa9.8□□□□□ -0.84
PTPRE-211ENST00000495530 KRTAP1-5Q9BYS1 174 aa9.8□□□□□ -0.84
PTPRE-211ENST00000495530 XCL1P47992 114 aa9.79□□□□□ -0.84
PTPRE-211ENST00000495530 DYNC1H1Q14204 4646 aaKnown RBP9.78□□□□□ -0.84
PTPRE-211ENST00000495530 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
PTPRE-211ENST00000495530 H3BRM9 83 aa9.78□□□□□ -0.84
PTPRE-211ENST00000495530 SCGB1D1O95968 90 aa9.78□□□□□ -0.84
PTPRE-211ENST00000495530 IGKCP01834 107 aa9.78□□□□□ -0.84
PTPRE-211ENST00000495530 CHAC1Q9BUX1 264 aa9.78□□□□□ -0.84
PTPRE-211ENST00000495530 FAT2Q9NYQ8 4349 aa9.78□□□□□ -0.84
PTPRE-211ENST00000495530 IGHV3OR16-9A0A0B4J2B5 98 aa9.77□□□□□ -0.85
PTPRE-211ENST00000495530 GAGE12HA6NDE8 117 aa9.77□□□□□ -0.85
PTPRE-211ENST00000495530 COX6A2Q02221 97 aa9.77□□□□□ -0.85
PTPRE-211ENST00000495530 C1orf134Q5TEV5 83 aa9.77□□□□□ -0.85
PTPRE-211ENST00000495530 LINC00469Q8N7U9 141 aa9.77□□□□□ -0.85
PTPRE-211ENST00000495530 IGLV5-45A0A087WSX0 123 aa9.76□□□□□ -0.85
PTPRE-211ENST00000495530 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
PTPRE-211ENST00000495530 COX7A2LO14548 114 aa9.76□□□□□ -0.85
PTPRE-211ENST00000495530 PSCAO43653 123 aa9.76□□□□□ -0.85
PTPRE-211ENST00000495530 TMEM170BQ5T4T1 132 aa9.76□□□□□ -0.85
PTPRE-211ENST00000495530 LINC00336Q6ZUF6 198 aa9.76□□□□□ -0.85
PTPRE-211ENST00000495530 LINC01561Q8N1V8 128 aa9.76□□□□□ -0.85
PTPRE-211ENST00000495530 C6orf223Q8N319 242 aa9.76□□□□□ -0.85
PTPRE-211ENST00000495530 PMCHL2Q9BQD1 86 aa9.76□□□□□ -0.85
PTPRE-211ENST00000495530 DNAH11Q96DT5 4516 aa9.76□□□□□ -0.85
PTPRE-211ENST00000495530 HSPG2P98160 4391 aa9.75□□□□□ -0.85
PTPRE-211ENST00000495530 DNAH2Q9P225 4427 aa9.75□□□□□ -0.85
PTPRE-211ENST00000495530 A0A087WZ39 114 aa9.75□□□□□ -0.85
PTPRE-211ENST00000495530 MALP21145 153 aa9.75□□□□□ -0.85
PTPRE-211ENST00000495530 FOXI1Q12951 378 aa9.75□□□□□ -0.85
PTPRE-211ENST00000495530 JOSD1Q15040 202 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-211ENST00000495530 CFAP161Q6P656 301 aa9.75□□□□□ -0.85
PTPRE-211ENST00000495530 CDKN2A-AS1Q9UH64 79 aa9.75□□□□□ -0.85
PTPRE-211ENST00000495530 DNAH6Q9C0G6 4158 aa9.75□□□□□ -0.85
PTPRE-211ENST00000495530 APOMO95445 188 aa9.74□□□□□ -0.85
PTPRE-211ENST00000495530 KRTAP26-1Q6PEX3 210 aa9.74□□□□□ -0.85
PTPRE-211ENST00000495530 C5orf38Q86SI9 138 aa9.74□□□□□ -0.85
PTPRE-211ENST00000495530 A0A1B0GVY2 172 aa9.73□□□□□ -0.85
PTPRE-211ENST00000495530 ZNF22P17026 224 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-211ENST00000495530 HERVK_113P61574 105 aa9.72□□□□□ -0.85
PTPRE-211ENST00000495530 DMBT1Q9UGM3 2413 aaPredicted RBP9.71□□□□□ -0.85
PTPRE-211ENST00000495530 LOC105371267A0A1B0GV96 52 aa9.71□□□□□ -0.86
PTPRE-211ENST00000495530 HSBP1L1C9JCN9 74 aa9.71□□□□□ -0.86
PTPRE-211ENST00000495530 UBR4Q5T4S7 5183 aa9.71□□□□□ -0.86
PTPRE-211ENST00000495530 IGHV1-58A0A0C4DH39 117 aa9.7□□□□□ -0.86
PTPRE-211ENST00000495530 TMEM223A0PJW6 202 aa9.7□□□□□ -0.86
PTPRE-211ENST00000495530 LORP23490 312 aaPredicted RBP9.69□□□□□ -0.86
PTPRE-211ENST00000495530 Q6ZRN7 208 aaPredicted RBP9.69□□□□□ -0.86
PTPRE-211ENST00000495530 PKD1P98161 4303 aa9.68□□□□□ -0.86
PTPRE-211ENST00000495530 IGHV3-64A0A075B6Q5 118 aa9.68□□□□□ -0.86
PTPRE-211ENST00000495530 SPINK8P0C7L1 97 aa9.68□□□□□ -0.86
PTPRE-211ENST00000495530 C14orf177Q52M58 125 aa9.68□□□□□ -0.86
PTPRE-211ENST00000495530 PYY3Q5JQD4 70 aa9.68□□□□□ -0.86
PTPRE-211ENST00000495530 ATOH7Q8N100 152 aa9.68□□□□□ -0.86
PTPRE-211ENST00000495530 MAPKAPK5-AS1Q8N8E1 139 aa9.68□□□□□ -0.86
PTPRE-211ENST00000495530 SMIM1B2RUZ4 78 aa9.67□□□□□ -0.86
PTPRE-211ENST00000495530 PRSS2P07478 247 aa9.67□□□□□ -0.86
PTPRE-211ENST00000495530 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
PTPRE-211ENST00000495530 DNAH17Q9UFH2 4485 aa9.66□□□□□ -0.86
PTPRE-211ENST00000495530 IGLV5-39A0A0G2JS06 123 aa9.66□□□□□ -0.86
PTPRE-211ENST00000495530 USP17L23D6RBM5 183 aa9.66□□□□□ -0.86
PTPRE-211ENST00000495530 ZNF561-AS1K7EIQ3 104 aa9.66□□□□□ -0.86
PTPRE-211ENST00000495530 C6orf226Q5I0X4 101 aa9.66□□□□□ -0.86
PTPRE-211ENST00000495530 STPG4Q8N801 248 aa9.66□□□□□ -0.86
PTPRE-211ENST00000495530 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
PTPRE-211ENST00000495530 E9PLD3 99 aa9.65□□□□□ -0.86
PTPRE-211ENST00000495530 F8WDY8 70 aa9.65□□□□□ -0.86
PTPRE-211ENST00000495530 LEPROTO15243 131 aa9.65□□□□□ -0.86
PTPRE-211ENST00000495530 Q8IZM0 81 aa9.65□□□□□ -0.86
PTPRE-211ENST00000495530 hDV102S1A0JD36 115 aa9.64□□□□□ -0.87
PTPRE-211ENST00000495530 EREGO14944 169 aa9.64□□□□□ -0.87
PTPRE-211ENST00000495530 S100A12P80511 92 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms