RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TMEM238C9JI98 176 aa4.55□□□□□ -1.68
GARNL3-219ENST00000495172 NCR2O95944 276 aa4.55□□□□□ -1.68
GARNL3-219ENST00000495172 LTAP01374 205 aa4.55□□□□□ -1.68
GARNL3-219ENST00000495172 RPL32P62910 135 aaKnown RBP4.55□□□□□ -1.68
GARNL3-219ENST00000495172 ZNF727A8MUV8 499 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 INMT-MINDY4F8WBC2 141 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 SLC25A20O43772 301 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 UPK1BO75841 260 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 CXCL1P09341 107 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 PMCHP20382 165 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 AP3S2P59780 193 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 UBE2G1P62253 170 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 FAM19A1Q7Z5A9 133 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 MRPL52Q86TS9 123 aaKnown RBP4.54□□□□□ -1.68
GARNL3-219ENST00000495172 SCGB1C1Q8TD33 95 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 SPRR4Q96PI1 79 aa4.54□□□□□ -1.68
GARNL3-219ENST00000495172 SIX6O95475 246 aa4.53□□□□□ -1.68
GARNL3-219ENST00000495172 BTCP35070 178 aa4.53□□□□□ -1.68
GARNL3-219ENST00000495172 FAM19A2Q8N3H0 131 aa4.53□□□□□ -1.68
GARNL3-219ENST00000495172 MRAP2Q96G30 205 aa4.53□□□□□ -1.68
GARNL3-219ENST00000495172 FMC1Q96HJ9 113 aa4.53□□□□□ -1.68
GARNL3-219ENST00000495172 IGHV3OR16-9A0A0B4J2B5 98 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 TRBV30A0A0K0K1B3 111 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 A0A1W2PRE2 83 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 IGLC6P0CF74 106 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 MZT2BQ6NZ67 158 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 HIGD2AQ9BW72 106 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 Q9H521 79 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 CYTL1Q9NRR1 136 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 TMEM167BQ9NRX6 74 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 TP73-AS1Q9UF72 201 aa4.52□□□□□ -1.69
GARNL3-219ENST00000495172 FAM74A7A6NL05 159 aa4.51□□□□□ -1.69
GARNL3-219ENST00000495172 F8WDY8 70 aa4.51□□□□□ -1.69
GARNL3-219ENST00000495172 LYZL1Q6UWQ5 148 aa4.51□□□□□ -1.69
GARNL3-219ENST00000495172 CBLN2Q8IUK8 224 aa4.51□□□□□ -1.69
GARNL3-219ENST00000495172 CHTOPQ9Y3Y2 248 aaKnown RBP4.51□□□□□ -1.69
GARNL3-219ENST00000495172 V9GYH0 126 aa4.51□□□□□ -1.69
GARNL3-219ENST00000495172 I3L3M4 83 aa4.5□□□□□ -1.69
GARNL3-219ENST00000495172 CXorf1O96002 111 aa4.5□□□□□ -1.69
GARNL3-219ENST00000495172 RPL37P61927 97 aaKnown RBP4.5□□□□□ -1.69
GARNL3-219ENST00000495172 MOBPQ13875 183 aa4.5□□□□□ -1.69
GARNL3-219ENST00000495172 HSPB11Q9Y547 144 aa4.5□□□□□ -1.69
GARNL3-219ENST00000495172 IGLV6-57P01721 117 aa4.49□□□□□ -1.69
GARNL3-219ENST00000495172 ZNF726P1Q15940 193 aa4.49□□□□□ -1.69
GARNL3-219ENST00000495172 FAM104AQ969W3 186 aa4.49□□□□□ -1.69
GARNL3-219ENST00000495172 HIST1H2BAQ96A08 127 aa4.49□□□□□ -1.69
GARNL3-219ENST00000495172 VCX3AQ9NNX9 186 aa4.49□□□□□ -1.69
GARNL3-219ENST00000495172 A0A087WXM4 84 aa4.48□□□□□ -1.69
GARNL3-219ENST00000495172 IGLV9-49A0A0B4J1Y8 123 aa4.48□□□□□ -1.69
GARNL3-219ENST00000495172 C7orf77A4D0Y5 90 aa4.48□□□□□ -1.69
GARNL3-219ENST00000495172 AKR1C3P42330 323 aa4.48□□□□□ -1.69
GARNL3-219ENST00000495172 TRGC1P0CF51 173 aa4.47□□□□□ -1.69
GARNL3-219ENST00000495172 TMEM126AQ9H061 195 aa4.47□□□□□ -1.69
GARNL3-219ENST00000495172 M0R378 163 aa4.46□□□□□ -1.7
GARNL3-219ENST00000495172 RPS20P60866 119 aaKnown RBP4.46□□□□□ -1.7
GARNL3-219ENST00000495172 BLOC1S1P78537 153 aa4.46□□□□□ -1.7
GARNL3-219ENST00000495172 CCDC32Q9BV29 185 aa4.46□□□□□ -1.7
GARNL3-219ENST00000495172 CCDC160A6NGH7 325 aa4.45□□□□□ -1.7
GARNL3-219ENST00000495172 ATP6V0CP27449 155 aa4.45□□□□□ -1.7
GARNL3-219ENST00000495172 TWIST1Q15672 202 aa4.45□□□□□ -1.7
GARNL3-219ENST00000495172 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
GARNL3-219ENST00000495172 BAGE2Q86Y30 109 aa4.45□□□□□ -1.7
GARNL3-219ENST00000495172 TOMM7Q9P0U1 55 aa4.45□□□□□ -1.7
GARNL3-219ENST00000495172 RPS29P62273 56 aaKnown RBP4.44□□□□□ -1.7
GARNL3-219ENST00000495172 CST9LP1Q5W188 147 aa4.44□□□□□ -1.7
GARNL3-219ENST00000495172 RPL39P62891 51 aaKnown RBP4.43□□□□□ -1.7
GARNL3-219ENST00000495172 NKAPP1Q8N9T2 125 aa4.43□□□□□ -1.7
GARNL3-219ENST00000495172 STOML3Q8TAV4 291 aa4.43□□□□□ -1.7
GARNL3-219ENST00000495172 ACTR3CQ9C0K3 210 aaPredicted RBP4.43□□□□□ -1.7
GARNL3-219ENST00000495172 MED9Q9NWA0 146 aa4.43□□□□□ -1.7
GARNL3-219ENST00000495172 NAP1L6A6NFF2 107 aa4.42□□□□□ -1.7
GARNL3-219ENST00000495172 FHITP49789 147 aa4.42□□□□□ -1.7
GARNL3-219ENST00000495172 TIMM17AQ99595 171 aa4.42□□□□□ -1.7
GARNL3-219ENST00000495172 CSDC2Q9Y534 153 aaKnown RBP4.42□□□□□ -1.7
GARNL3-219ENST00000495172 TRBV6-5A0A0K0K1A5 114 aa4.41□□□□□ -1.7
GARNL3-219ENST00000495172 SPRR2EP22531 72 aa4.41□□□□□ -1.7
GARNL3-219ENST00000495172 SPRR2BP35325 72 aa4.41□□□□□ -1.7
GARNL3-219ENST00000495172 SPRR2AP35326 72 aa4.41□□□□□ -1.7
GARNL3-219ENST00000495172 POLR2KP53803 58 aaKnown RBP4.41□□□□□ -1.7
GARNL3-219ENST00000495172 KIAA1644Q3SXP7 199 aa4.41□□□□□ -1.7
GARNL3-219ENST00000495172 DEDD2Q8WXF8 326 aa4.41□□□□□ -1.7
GARNL3-219ENST00000495172 ST20Q9HBF5 79 aa4.41□□□□□ -1.7
GARNL3-219ENST00000495172 hCG_2014768A0A024R1R8 64 aa4.4□□□□□ -1.71
GARNL3-219ENST00000495172 IGLV5-37A0A075B6J1 123 aa4.4□□□□□ -1.71
GARNL3-219ENST00000495172 TGIF2-C20orf24A0A0A6YYL0 155 aa4.4□□□□□ -1.71
GARNL3-219ENST00000495172 C20orf202A1L168 122 aa4.4□□□□□ -1.71
GARNL3-219ENST00000495172 IFITM10A6NMD0 228 aa4.4□□□□□ -1.71
GARNL3-219ENST00000495172 GAGE2AQ6NT46 116 aa4.4□□□□□ -1.71
GARNL3-219ENST00000495172 HRCT1Q6UXD1 115 aa4.4□□□□□ -1.71
GARNL3-219ENST00000495172 GNB1LQ9BYB4 327 aa4.4□□□□□ -1.71
GARNL3-219ENST00000495172 NUDT15Q9NV35 164 aa4.4□□□□□ -1.71
GARNL3-219ENST00000495172 SMKR1H3BMG3 65 aa4.39□□□□□ -1.71
GARNL3-219ENST00000495172 NPSP0C0P6 89 aa4.39□□□□□ -1.71
GARNL3-219ENST00000495172 FCER1GP30273 86 aa4.39□□□□□ -1.71
GARNL3-219ENST00000495172 CKS1BP61024 79 aa4.39□□□□□ -1.71
GARNL3-219ENST00000495172 PPP1R1CQ8WVI7 109 aa4.39□□□□□ -1.71
GARNL3-219ENST00000495172 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms