RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 N4BP2Q86UW6 1770 aaPredicted RBP0.45□□□□□ -2.34
VPS50-219ENST00000495039 UBR2Q8IWV8 1755 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 PAPPA2Q9BXP8 1791 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 POLR1AO95602 1720 aaPredicted RBP0.45□□□□□ -2.34
VPS50-219ENST00000495039 ITSN1Q15811 1721 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 KNDC1Q76NI1 1749 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 MON2Q7Z3U7 1717 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 MYH2Q9UKX2 1941 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 A0A087WWC5 75 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 TRAV12-3A0A0B4J271 114 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 TRBV30A0A0K0K1B3 111 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 A0A1B0GUT8 65 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 CLPSL1A2RUU4 121 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 LINC01549A6NIU2 74 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 FAM223BA6NKX1 122 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 HIGD1CA8MV81 97 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 LINC00587B1AMM8 73 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 C10orf142B7Z368 130 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 G3V318 75 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 H3BUA1 57 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 M0R143 59 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 NDUFA4O00483 81 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 NDUFA3O95167 84 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 NCR2O95944 276 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 MGPP08493 103 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 NMBP08949 121 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 COX6CP09669 75 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 ARMS2P0C7Q2 107 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 SMIM13P0DJ93 91 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 SAA2P0DJI9 122 aaPredicted RBP0.45□□□□□ -2.34
VPS50-219ENST00000495039 PYYP10082 97 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 CBLN1P23435 193 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 GCHFRP30047 84 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 IFI27P40305 119 aaPredicted RBP0.45□□□□□ -2.34
VPS50-219ENST00000495039 ASIPP42127 132 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 DEFB131AP59861 70 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 KRTDAPP60985 99 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 RPL37AP61513 92 aaKnown RBP0.45□□□□□ -2.34
VPS50-219ENST00000495039 PKIAP61925 76 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 SEC11AP67812 179 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 TFF3Q07654 80 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 ZNF56Q15929 161 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 PMCHL1Q16048 86 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 IQCJQ1A5X6 159 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 DEFB112Q30KQ8 113 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 NMSQ5H8A3 153 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 PSMG4Q5JS54 123 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 FAM74A4Q5TZK3 123 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 Q5XG85 94 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 MRPL54Q6P161 138 aaKnown RBP0.45□□□□□ -2.34
VPS50-219ENST00000495039 LYPD5Q6UWN5 251 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 ATP11AUNQ6ZP68 121 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 FAM223AQ8IWN6 122 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 ATP6V0E2Q8NHE4 81 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 TSKUQ8WUA8 353 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 COPS9Q8WXC6 57 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 DMAC1Q96GE9 116 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 TRGV9Q99603 122 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 C12orf57Q99622 126 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 MGST2Q99735 147 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 PMCHL2Q9BQD1 86 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 LIMD2Q9BT23 127 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 TMEM191AQ9H0A3 160 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 AGPAT4-IT1Q9H0P7 198 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 ST20Q9HBF5 79 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 ERG28Q9UKR5 140 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 C5P01031 1676 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 ALS2Q96Q42 1657 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 MGAMO43451 1857 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 MYO5AQ9Y4I1 1855 aaKnown RBP0.45□□□□□ -2.34
VPS50-219ENST00000495039 NHSL1Q5SYE7 1610 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 AKAP12Q02952 1782 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 KDM3BQ7LBC6 1761 aa0.45□□□□□ -2.34
VPS50-219ENST00000495039 MYH3P11055 1940 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 RGPD1P0DJD0 1748 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 IFT172Q9UG01 1749 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 MYOM1P52179 1685 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 ZNF142P52746 1687 aaPredicted RBP0.44□□□□□ -2.34
VPS50-219ENST00000495039 NHSQ6T4R5 1651 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 USP54Q70EL1 1684 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 FAM208AQ9UK61 1670 aaKnown RBP0.44□□□□□ -2.34
VPS50-219ENST00000495039 KIF20BQ96Q89 1820 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 TRBV20-1A0A075B6N2 111 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 TRAV12-2A0A075B6T6 113 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 TRGV1A0A0A0MS02 117 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 TRBV10-1A0A0K0K1A3 114 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 MYMXA0A1B0GTQ4 84 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 RBAKDNA6NC62 111 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 NUPR2A6NF83 97 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 A6NN06 94 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 CCDC179H3BU77 68 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 H3BVH4 76 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 I3L2K1 104 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 I3L3M4 83 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 M0R2P5 195 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 M0R3E3 92 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 IGKCP01834 107 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 IGLC6P0CF74 106 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 IGLC1P0CG04 106 aa0.44□□□□□ -2.34
VPS50-219ENST00000495039 SPART-AS1P0CW21 52 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms