RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 SMCO4Q9NRQ5 59 aa13.37□□□□□ -0.27
CCDC12-207ENST00000494655 SLPIP03973 132 aa13.36□□□□□ -0.27
CCDC12-207ENST00000494655 PLA2G1BP04054 148 aaKnown RBP13.36□□□□□ -0.27
CCDC12-207ENST00000494655 C5orf38Q86SI9 138 aa13.36□□□□□ -0.27
CCDC12-207ENST00000494655 CARD19Q96LW7 228 aa13.36□□□□□ -0.27
CCDC12-207ENST00000494655 LINC01549A6NIU2 74 aa13.35□□□□□ -0.27
CCDC12-207ENST00000494655 DPH3Q96FX2 82 aa13.35□□□□□ -0.27
CCDC12-207ENST00000494655 VCX2Q9H322 139 aa13.35□□□□□ -0.27
CCDC12-207ENST00000494655 TRAPPC1Q9Y5R8 145 aa13.35□□□□□ -0.27
CCDC12-207ENST00000494655 FA2HQ7L5A8 372 aa13.34□□□□□ -0.27
CCDC12-207ENST00000494655 FAM104AQ969W3 186 aa13.34□□□□□ -0.27
CCDC12-207ENST00000494655 SYCNQ0VAF6 134 aa13.33□□□□□ -0.28
CCDC12-207ENST00000494655 OR10D4PQ8NGN7 298 aa13.33□□□□□ -0.28
CCDC12-207ENST00000494655 LINC00526Q96FQ7 95 aa13.33□□□□□ -0.28
CCDC12-207ENST00000494655 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.33□□□□□ -0.28
CCDC12-207ENST00000494655 ABCA13Q86UQ4 5058 aa13.32□□□□□ -0.28
CCDC12-207ENST00000494655 COX6A2Q02221 97 aa13.32□□□□□ -0.28
CCDC12-207ENST00000494655 SPAG11BQ08648 103 aa13.32□□□□□ -0.28
CCDC12-207ENST00000494655 CAMK2N2Q96S95 79 aa13.32□□□□□ -0.28
CCDC12-207ENST00000494655 TIMM17AQ99595 171 aa13.32□□□□□ -0.28
CCDC12-207ENST00000494655 IGLV4-69A0A075B6H9 119 aa13.31□□□□□ -0.28
CCDC12-207ENST00000494655 IGHV3OR16-9A0A0B4J2B5 98 aa13.31□□□□□ -0.28
CCDC12-207ENST00000494655 ORAOV1Q8WV07 137 aa13.31□□□□□ -0.28
CCDC12-207ENST00000494655 TOMM6Q96B49 74 aa13.31□□□□□ -0.28
CCDC12-207ENST00000494655 IGIPA6NJ69 53 aa13.3□□□□□ -0.28
CCDC12-207ENST00000494655 INAFM2P0DMQ5 153 aa13.3□□□□□ -0.28
CCDC12-207ENST00000494655 C2orf48Q96LS8 159 aa13.3□□□□□ -0.28
CCDC12-207ENST00000494655 UBE2D1P51668 147 aa13.29□□□□□ -0.28
CCDC12-207ENST00000494655 CIRBPQ14011 172 aaKnown RBP13.29□□□□□ -0.28
CCDC12-207ENST00000494655 SCGB3A1Q96QR1 104 aa13.29□□□□□ -0.28
CCDC12-207ENST00000494655 LINC00474Q9P2X8 69 aa13.29□□□□□ -0.28
CCDC12-207ENST00000494655 IGKV2-24A0A0C4DH68 120 aa13.28□□□□□ -0.28
CCDC12-207ENST00000494655 SEC11AP67812 179 aa13.28□□□□□ -0.28
CCDC12-207ENST00000494655 LINC00242Q5T6M2 205 aa13.28□□□□□ -0.28
CCDC12-207ENST00000494655 ERASQ7Z444 233 aa13.28□□□□□ -0.28
CCDC12-207ENST00000494655 SPACA4Q8TDM5 124 aa13.28□□□□□ -0.28
CCDC12-207ENST00000494655 AMELXQ99217 191 aa13.28□□□□□ -0.28
CCDC12-207ENST00000494655 LINC01546A6NGU7 62 aa13.27□□□□□ -0.29
CCDC12-207ENST00000494655 CHTF8P0CG12 524 aa13.27□□□□□ -0.29
CCDC12-207ENST00000494655 A0A087WZ39 114 aa13.26□□□□□ -0.29
CCDC12-207ENST00000494655 F8WDY8 70 aa13.26□□□□□ -0.29
CCDC12-207ENST00000494655 PANO1I0J062 215 aa13.26□□□□□ -0.29
CCDC12-207ENST00000494655 MAJINQ3KP22 176 aa13.26□□□□□ -0.29
CCDC12-207ENST00000494655 LINC00173Q6ZV60 143 aa13.26□□□□□ -0.29
CCDC12-207ENST00000494655 DNAH8Q96JB1 4490 aa13.25□□□□□ -0.29
CCDC12-207ENST00000494655 Q6ZRU5 148 aa13.25□□□□□ -0.29
CCDC12-207ENST00000494655 GEMIN7Q9H840 131 aaKnown RBP13.25□□□□□ -0.29
CCDC12-207ENST00000494655 LOC107984640A0A0U1RRK4 108 aa13.24□□□□□ -0.29
CCDC12-207ENST00000494655 NDUFA1O15239 70 aa13.24□□□□□ -0.29
CCDC12-207ENST00000494655 RAB5BP61020 215 aa13.24□□□□□ -0.29
CCDC12-207ENST00000494655 HERVK_113P63121 156 aa13.24□□□□□ -0.29
CCDC12-207ENST00000494655 C18orf32Q8TCD1 76 aa13.24□□□□□ -0.29
CCDC12-207ENST00000494655 A0A087WYN8 130 aa13.23□□□□□ -0.29
CCDC12-207ENST00000494655 A0A096LNI7 61 aa13.23□□□□□ -0.29
CCDC12-207ENST00000494655 ZC2HC1BQ5TFG8 222 aa13.23□□□□□ -0.29
CCDC12-207ENST00000494655 RPL37AP61513 92 aaKnown RBP13.22□□□□□ -0.29
CCDC12-207ENST00000494655 SLC7A5P1Q8MH63 180 aa13.22□□□□□ -0.29
CCDC12-207ENST00000494655 LINC01561Q8N1V8 128 aa13.22□□□□□ -0.29
CCDC12-207ENST00000494655 PACRGQ96M98 296 aaPredicted RBP13.22□□□□□ -0.29
CCDC12-207ENST00000494655 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.21□□□□□ -0.29
CCDC12-207ENST00000494655 LINC00614P0C842 121 aa13.21□□□□□ -0.29
CCDC12-207ENST00000494655 CBLN2Q8IUK8 224 aa13.21□□□□□ -0.29
CCDC12-207ENST00000494655 PRSS2P07478 247 aa13.2□□□□□ -0.3
CCDC12-207ENST00000494655 RNF151Q2KHN1 245 aa13.2□□□□□ -0.3
CCDC12-207ENST00000494655 FAM19A3Q7Z5A8 133 aa13.2□□□□□ -0.3
CCDC12-207ENST00000494655 STPG4Q8N801 248 aa13.2□□□□□ -0.3
CCDC12-207ENST00000494655 C7orf33Q8WU49 177 aa13.2□□□□□ -0.3
CCDC12-207ENST00000494655 MRPL35Q9NZE8 188 aaKnown RBP13.2□□□□□ -0.3
CCDC12-207ENST00000494655 PLAC8Q9NZF1 115 aa13.2□□□□□ -0.3
CCDC12-207ENST00000494655 HBDP02042 147 aa13.19□□□□□ -0.3
CCDC12-207ENST00000494655 RPL18AQ02543 176 aaKnown RBP13.19□□□□□ -0.3
CCDC12-207ENST00000494655 GAGE2BQ13066 116 aa13.19□□□□□ -0.3
CCDC12-207ENST00000494655 YPEL4Q96NS1 127 aa13.19□□□□□ -0.3
CCDC12-207ENST00000494655 PTTG1IPP53801 180 aa13.18□□□□□ -0.3
CCDC12-207ENST00000494655 SRRM2Q9UQ35 2752 aaKnown RBP13.18□□□□□ -0.3
CCDC12-207ENST00000494655 PMVKQ15126 192 aa13.17□□□□□ -0.3
CCDC12-207ENST00000494655 LINC00469Q8N7U9 141 aa13.17□□□□□ -0.3
CCDC12-207ENST00000494655 FAT1Q14517 4588 aa13.17□□□□□ -0.3
CCDC12-207ENST00000494655 TOMM7Q9P0U1 55 aa13.16□□□□□ -0.3
CCDC12-207ENST00000494655 A0A0J9YXV3 536 aa13.15□□□□□ -0.3
CCDC12-207ENST00000494655 TINCRA0A1B0GVN0 87 aa13.15□□□□□ -0.3
CCDC12-207ENST00000494655 CKS1BP61024 79 aa13.15□□□□□ -0.3
CCDC12-207ENST00000494655 CST9LQ9H4G1 147 aa13.15□□□□□ -0.3
CCDC12-207ENST00000494655 CDKN2A-AS1Q9UH64 79 aa13.15□□□□□ -0.3
CCDC12-207ENST00000494655 TRBV30A0A0K0K1B3 111 aa13.13□□□□□ -0.31
CCDC12-207ENST00000494655 ATP5LO75964 103 aa13.13□□□□□ -0.31
CCDC12-207ENST00000494655 NDUFA6P56556 154 aa13.13□□□□□ -0.31
CCDC12-207ENST00000494655 C6orf226Q5I0X4 101 aa13.13□□□□□ -0.31
CCDC12-207ENST00000494655 UNQ6190/PRO20217Q6UXQ8 127 aa13.13□□□□□ -0.31
CCDC12-207ENST00000494655 Q8IZM0 81 aa13.13□□□□□ -0.31
CCDC12-207ENST00000494655 KIAA0087Q14695 138 aa13.12□□□□□ -0.31
CCDC12-207ENST00000494655 PMCHL1Q16048 86 aa13.12□□□□□ -0.31
CCDC12-207ENST00000494655 CHCHD1Q96BP2 118 aaKnown RBP13.12□□□□□ -0.31
CCDC12-207ENST00000494655 URB1-AS1Q96HZ7 61 aa13.12□□□□□ -0.31
CCDC12-207ENST00000494655 VPS13BQ7Z7G8 4022 aa13.12□□□□□ -0.31
CCDC12-207ENST00000494655 H3BRM9 83 aa13.11□□□□□ -0.31
CCDC12-207ENST00000494655 C6orf48Q9UBA6 75 aa13.11□□□□□ -0.31
CCDC12-207ENST00000494655 A0A096LNJ9 63 aa13.1□□□□□ -0.31
CCDC12-207ENST00000494655 C10orf25Q5T742 122 aa13.1□□□□□ -0.31
CCDC12-207ENST00000494655 TLX1NBP0CAT3 122 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms