RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 TGIF2-C20orf24A0A0A6YYL0 155 aa5.85□□□□□ -1.47
UBR4-216ENST00000494503 A6NJY4 79 aa5.85□□□□□ -1.47
UBR4-216ENST00000494503 M0QXV9 152 aa5.85□□□□□ -1.47
UBR4-216ENST00000494503 HBBP68871 147 aa5.85□□□□□ -1.47
UBR4-216ENST00000494503 ADIRFQ15847 76 aa5.85□□□□□ -1.47
UBR4-216ENST00000494503 UNQ6190/PRO20217Q6UXQ8 127 aa5.85□□□□□ -1.47
UBR4-216ENST00000494503 MRPL35Q9NZE8 188 aaKnown RBP5.85□□□□□ -1.47
UBR4-216ENST00000494503 LPAP08519 4548 aa5.85□□□□□ -1.47
UBR4-216ENST00000494503 TCAPO15273 167 aa5.84□□□□□ -1.47
UBR4-216ENST00000494503 RNF151Q2KHN1 245 aa5.84□□□□□ -1.47
UBR4-216ENST00000494503 C10orf25Q5T742 122 aa5.84□□□□□ -1.47
UBR4-216ENST00000494503 TIMM21Q9BVV7 248 aa5.84□□□□□ -1.47
UBR4-216ENST00000494503 C6orf48Q9UBA6 75 aa5.84□□□□□ -1.47
UBR4-216ENST00000494503 V9GYV3 84 aa5.84□□□□□ -1.47
UBR4-216ENST00000494503 hCG_2014768A0A024R1R8 64 aa5.83□□□□□ -1.48
UBR4-216ENST00000494503 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
UBR4-216ENST00000494503 TNFRSF6BO95407 300 aa5.83□□□□□ -1.48
UBR4-216ENST00000494503 TMEM241Q24JQ0 296 aa5.83□□□□□ -1.48
UBR4-216ENST00000494503 FAM104BQ5XKR9 115 aa5.83□□□□□ -1.48
UBR4-216ENST00000494503 AKAP14Q86UN6 197 aa5.83□□□□□ -1.48
UBR4-216ENST00000494503 KRTAP11-1Q8IUC1 163 aa5.83□□□□□ -1.48
UBR4-216ENST00000494503 PACRGQ96M98 296 aaPredicted RBP5.83□□□□□ -1.48
UBR4-216ENST00000494503 C20orf78Q9BR46 151 aa5.83□□□□□ -1.48
UBR4-216ENST00000494503 SMIM2Q9BVW6 85 aa5.83□□□□□ -1.48
UBR4-216ENST00000494503 SPANXA1Q9NS26 97 aa5.83□□□□□ -1.48
UBR4-216ENST00000494503 LINC00862A6NCI5 91 aa5.82□□□□□ -1.48
UBR4-216ENST00000494503 D6R8Y8 96 aa5.82□□□□□ -1.48
UBR4-216ENST00000494503 F8WDY8 70 aa5.82□□□□□ -1.48
UBR4-216ENST00000494503 SRP19P09132 144 aaKnown RBP5.82□□□□□ -1.48
UBR4-216ENST00000494503 RAB5AP20339 215 aa5.82□□□□□ -1.48
UBR4-216ENST00000494503 IFI27P40305 119 aaPredicted RBP5.82□□□□□ -1.48
UBR4-216ENST00000494503 MRPL54Q6P161 138 aaKnown RBP5.82□□□□□ -1.48
UBR4-216ENST00000494503 SMDT1Q9H4I9 107 aa5.82□□□□□ -1.48
UBR4-216ENST00000494503 IGHV3OR16-9A0A0B4J2B5 98 aa5.81□□□□□ -1.48
UBR4-216ENST00000494503 F8W036 122 aa5.81□□□□□ -1.48
UBR4-216ENST00000494503 PRSS2P07478 247 aa5.81□□□□□ -1.48
UBR4-216ENST00000494503 RPL13AP40429 203 aaKnown RBP5.81□□□□□ -1.48
UBR4-216ENST00000494503 FAM74A3Q4VXF1 159 aa5.81□□□□□ -1.48
UBR4-216ENST00000494503 C2orf82Q6UX34 121 aa5.81□□□□□ -1.48
UBR4-216ENST00000494503 TOMM7Q9P0U1 55 aa5.81□□□□□ -1.48
UBR4-216ENST00000494503 TSPAN13O95857 204 aa5.8□□□□□ -1.48
UBR4-216ENST00000494503 NPYP01303 97 aa5.8□□□□□ -1.48
UBR4-216ENST00000494503 S100A8P05109 93 aa5.8□□□□□ -1.48
UBR4-216ENST00000494503 TLX1NBP0CAT3 122 aa5.8□□□□□ -1.48
UBR4-216ENST00000494503 RPL23P62829 140 aaKnown RBP5.8□□□□□ -1.48
UBR4-216ENST00000494503 A0A0U1RQV1 116 aa5.79□□□□□ -1.48
UBR4-216ENST00000494503 A0A1B0GW15 77 aa5.79□□□□□ -1.48
UBR4-216ENST00000494503 NDUFC2-KCTD14E9PQ53 114 aa5.79□□□□□ -1.48
UBR4-216ENST00000494503 CKS1BP61024 79 aa5.79□□□□□ -1.48
UBR4-216ENST00000494503 MRPS36P82909 103 aaKnown RBP5.79□□□□□ -1.48
UBR4-216ENST00000494503 LINC00469Q8N7U9 141 aa5.79□□□□□ -1.48
UBR4-216ENST00000494503 C2orf88Q9BSF0 95 aa5.79□□□□□ -1.48
UBR4-216ENST00000494503 NAT8Q9UHE5 227 aa5.79□□□□□ -1.48
UBR4-216ENST00000494503 TRBV24-1A0A075B6N3 115 aa5.78□□□□□ -1.48
UBR4-216ENST00000494503 TRBV30A0A0K0K1B3 111 aa5.78□□□□□ -1.48
UBR4-216ENST00000494503 LOC389332A0A1B0GUA5 103 aa5.78□□□□□ -1.48
UBR4-216ENST00000494503 SMIM27A0A1W2PRY6 76 aa5.78□□□□□ -1.48
UBR4-216ENST00000494503 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
UBR4-216ENST00000494503 RPL32P62910 135 aaKnown RBP5.78□□□□□ -1.48
UBR4-216ENST00000494503 Q6ZN92 141 aa5.78□□□□□ -1.48
UBR4-216ENST00000494503 TEX43Q6ZNM6 134 aa5.78□□□□□ -1.48
UBR4-216ENST00000494503 TMEM141Q96I45 108 aa5.78□□□□□ -1.48
UBR4-216ENST00000494503 IGLV4-3A0A075B6K6 122 aa5.77□□□□□ -1.49
UBR4-216ENST00000494503 C9orf129Q5T035 196 aaKnown RBP5.77□□□□□ -1.49
UBR4-216ENST00000494503 LINC00242Q5T6M2 205 aa5.77□□□□□ -1.49
UBR4-216ENST00000494503 ORMDL3Q8N138 153 aa5.77□□□□□ -1.49
UBR4-216ENST00000494503 FAM104AQ969W3 186 aa5.77□□□□□ -1.49
UBR4-216ENST00000494503 PRELID3AQ96N28 172 aa5.77□□□□□ -1.49
UBR4-216ENST00000494503 PPBPP02775 128 aa5.76□□□□□ -1.49
UBR4-216ENST00000494503 KIAA0087Q14695 138 aa5.76□□□□□ -1.49
UBR4-216ENST00000494503 C6orf226Q5I0X4 101 aa5.76□□□□□ -1.49
UBR4-216ENST00000494503 ZC2HC1BQ5TFG8 222 aa5.76□□□□□ -1.49
UBR4-216ENST00000494503 TMEM136Q6ZRR5 245 aa5.76□□□□□ -1.49
UBR4-216ENST00000494503 KRTAP7-1Q8IUC3 87 aa5.76□□□□□ -1.49
UBR4-216ENST00000494503 XAGE1AQ9HD64 81 aa5.76□□□□□ -1.49
UBR4-216ENST00000494503 ZNF861PO60384 105 aa5.75□□□□□ -1.49
UBR4-216ENST00000494503 PEA15Q15121 130 aa5.75□□□□□ -1.49
UBR4-216ENST00000494503 ALKBH7Q9BT30 221 aaPredicted RBP5.75□□□□□ -1.49
UBR4-216ENST00000494503 CTDSP1Q9GZU7 261 aa5.75□□□□□ -1.49
UBR4-216ENST00000494503 VCX2Q9H322 139 aa5.75□□□□□ -1.49
UBR4-216ENST00000494503 MAP1LC3AQ9H492 121 aa5.75□□□□□ -1.49
UBR4-216ENST00000494503 C9JQL5 133 aa5.74□□□□□ -1.49
UBR4-216ENST00000494503 NUPR1O60356 82 aa5.74□□□□□ -1.49
UBR4-216ENST00000494503 LBHQ53QV2 105 aaPredicted RBP5.74□□□□□ -1.49
UBR4-216ENST00000494503 CYSLTR1Q9Y271 337 aa5.74□□□□□ -1.49
UBR4-216ENST00000494503 CARHSP1Q9Y2V2 147 aaKnown RBP5.74□□□□□ -1.49
UBR4-216ENST00000494503 PYGO1Q9Y3Y4 419 aa5.74□□□□□ -1.49
UBR4-216ENST00000494503 C22orf24Q9Y442 160 aa5.74□□□□□ -1.49
UBR4-216ENST00000494503 A0A1B0GXF2 115 aa5.73□□□□□ -1.49
UBR4-216ENST00000494503 RPL28P46779 137 aaKnown RBP5.73□□□□□ -1.49
UBR4-216ENST00000494503 SRSF3P84103 164 aaKnown RBP5.73□□□□□ -1.49
UBR4-216ENST00000494503 C2orf66Q6UXQ4 117 aa5.73□□□□□ -1.49
UBR4-216ENST00000494503 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
UBR4-216ENST00000494503 GEMIN7Q9H840 131 aaKnown RBP5.73□□□□□ -1.49
UBR4-216ENST00000494503 MUC2Q02817 5179 aa5.72□□□□□ -1.49
UBR4-216ENST00000494503 GAGE10A6NGK3 116 aa5.72□□□□□ -1.49
UBR4-216ENST00000494503 MRPL55Q7Z7F7 128 aaKnown RBP5.72□□□□□ -1.49
UBR4-216ENST00000494503 RPL37AP8A6NKH3 93 aa5.71□□□□□ -1.5
UBR4-216ENST00000494503 CRYGAP11844 174 aa5.71□□□□□ -1.5
UBR4-216ENST00000494503 ATP5L2Q7Z4Y8 100 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms