RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 LINC01549A6NIU2 74 aa8.77□□□□□ -1.01
COL1A1-208ENST00000494334 COX7A2LO14548 114 aa8.77□□□□□ -1.01
COL1A1-208ENST00000494334 SCO1O75880 301 aa8.77□□□□□ -1.01
COL1A1-208ENST00000494334 UBE2D1P51668 147 aa8.77□□□□□ -1.01
COL1A1-208ENST00000494334 XGP55808 180 aa8.77□□□□□ -1.01
COL1A1-208ENST00000494334 LINC00242Q5T6M2 205 aa8.77□□□□□ -1.01
COL1A1-208ENST00000494334 C9orf163Q8N9P6 203 aa8.77□□□□□ -1.01
COL1A1-208ENST00000494334 A0A096LNJ9 63 aa8.76□□□□□ -1.01
COL1A1-208ENST00000494334 MALP21145 153 aa8.76□□□□□ -1.01
COL1A1-208ENST00000494334 RAB5BP61020 215 aa8.76□□□□□ -1.01
COL1A1-208ENST00000494334 C2orf88Q9BSF0 95 aa8.76□□□□□ -1.01
COL1A1-208ENST00000494334 COX6A2Q02221 97 aa8.75□□□□□ -1.01
COL1A1-208ENST00000494334 PAPPA-AS1Q5QFB9 102 aa8.75□□□□□ -1.01
COL1A1-208ENST00000494334 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.74□□□□□ -1.01
COL1A1-208ENST00000494334 PMCHL1Q16048 86 aa8.74□□□□□ -1.01
COL1A1-208ENST00000494334 Q6ZSA8 131 aa8.74□□□□□ -1.01
COL1A1-208ENST00000494334 LINC00526Q96FQ7 95 aa8.74□□□□□ -1.01
COL1A1-208ENST00000494334 ZNF561-AS1K7EIQ3 104 aa8.73□□□□□ -1.01
COL1A1-208ENST00000494334 APOMO95445 188 aa8.73□□□□□ -1.01
COL1A1-208ENST00000494334 HBDP02042 147 aa8.73□□□□□ -1.01
COL1A1-208ENST00000494334 HAMPP81172 84 aa8.73□□□□□ -1.01
COL1A1-208ENST00000494334 FAM19A3Q7Z5A8 133 aa8.73□□□□□ -1.01
COL1A1-208ENST00000494334 KRTAP17-1Q9BYP8 105 aa8.73□□□□□ -1.01
COL1A1-208ENST00000494334 A0A087WZ39 114 aa8.72□□□□□ -1.01
COL1A1-208ENST00000494334 SDIM1Q6ZPB5 146 aa8.72□□□□□ -1.01
COL1A1-208ENST00000494334 CHCHD1Q96BP2 118 aaKnown RBP8.72□□□□□ -1.01
COL1A1-208ENST00000494334 FAT1Q14517 4588 aa8.71□□□□□ -1.01
COL1A1-208ENST00000494334 IGLV4-69A0A075B6H9 119 aa8.71□□□□□ -1.02
COL1A1-208ENST00000494334 IGHV3-64A0A075B6Q5 118 aa8.71□□□□□ -1.02
COL1A1-208ENST00000494334 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.71□□□□□ -1.02
COL1A1-208ENST00000494334 PDZD11Q5EBL8 140 aa8.71□□□□□ -1.02
COL1A1-208ENST00000494334 CST9LQ9H4G1 147 aa8.71□□□□□ -1.02
COL1A1-208ENST00000494334 BAGE3Q86Y29 109 aa8.7□□□□□ -1.02
COL1A1-208ENST00000494334 OR10D4PQ8NGN7 298 aa8.7□□□□□ -1.02
COL1A1-208ENST00000494334 A0A0J9YXV3 536 aa8.69□□□□□ -1.02
COL1A1-208ENST00000494334 HERVK_113P63121 156 aa8.69□□□□□ -1.02
COL1A1-208ENST00000494334 SEC11AP67812 179 aa8.69□□□□□ -1.02
COL1A1-208ENST00000494334 SPAG11BQ08648 103 aa8.69□□□□□ -1.02
COL1A1-208ENST00000494334 SYCNQ0VAF6 134 aa8.69□□□□□ -1.02
COL1A1-208ENST00000494334 PMVKQ15126 192 aa8.69□□□□□ -1.02
COL1A1-208ENST00000494334 LINC01561Q8N1V8 128 aa8.69□□□□□ -1.02
COL1A1-208ENST00000494334 ORAOV1Q8WV07 137 aa8.69□□□□□ -1.02
COL1A1-208ENST00000494334 C2orf48Q96LS8 159 aa8.69□□□□□ -1.02
COL1A1-208ENST00000494334 PANO1I0J062 215 aa8.68□□□□□ -1.02
COL1A1-208ENST00000494334 Q8N1X5 172 aa8.68□□□□□ -1.02
COL1A1-208ENST00000494334 CARD19Q96LW7 228 aa8.68□□□□□ -1.02
COL1A1-208ENST00000494334 CAMK2N2Q96S95 79 aa8.68□□□□□ -1.02
COL1A1-208ENST00000494334 CHAC1Q9BUX1 264 aa8.68□□□□□ -1.02
COL1A1-208ENST00000494334 CDKN2A-AS1Q9UH64 79 aa8.68□□□□□ -1.02
COL1A1-208ENST00000494334 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.68□□□□□ -1.02
COL1A1-208ENST00000494334 TINCRA0A1B0GVN0 87 aa8.67□□□□□ -1.02
COL1A1-208ENST00000494334 HSBP1O75506 76 aa8.67□□□□□ -1.02
COL1A1-208ENST00000494334 ATP5LO75964 103 aa8.67□□□□□ -1.02
COL1A1-208ENST00000494334 SMR3BP02814 79 aaPredicted RBP8.67□□□□□ -1.02
COL1A1-208ENST00000494334 LINC00310P59036 64 aa8.67□□□□□ -1.02
COL1A1-208ENST00000494334 KIAA0087Q14695 138 aa8.67□□□□□ -1.02
COL1A1-208ENST00000494334 Q6ZRU5 148 aa8.67□□□□□ -1.02
COL1A1-208ENST00000494334 SCXQ7RTU7 201 aa8.67□□□□□ -1.02
COL1A1-208ENST00000494334 FAM19A2Q8N3H0 131 aa8.67□□□□□ -1.02
COL1A1-208ENST00000494334 CIRBP-AS1Q8TBR5 109 aa8.67□□□□□ -1.02
COL1A1-208ENST00000494334 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
COL1A1-208ENST00000494334 SERF1AO75920 110 aa8.66□□□□□ -1.02
COL1A1-208ENST00000494334 S100A1P23297 94 aa8.66□□□□□ -1.02
COL1A1-208ENST00000494334 NDUFA6P56556 154 aa8.66□□□□□ -1.02
COL1A1-208ENST00000494334 NUPR1O60356 82 aa8.65□□□□□ -1.02
COL1A1-208ENST00000494334 ATP6V1G1O75348 118 aa8.65□□□□□ -1.02
COL1A1-208ENST00000494334 CIRBPQ14011 172 aaKnown RBP8.65□□□□□ -1.02
COL1A1-208ENST00000494334 KRTAP4-5Q9BYR2 181 aa8.65□□□□□ -1.02
COL1A1-208ENST00000494334 IGLV5-45A0A087WSX0 123 aa8.64□□□□□ -1.03
COL1A1-208ENST00000494334 F8WDY8 70 aa8.64□□□□□ -1.03
COL1A1-208ENST00000494334 CHTF8P0CG12 524 aa8.64□□□□□ -1.03
COL1A1-208ENST00000494334 LINC00469Q8N7U9 141 aa8.64□□□□□ -1.03
COL1A1-208ENST00000494334 NDUFA1O15239 70 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST1H2BKO60814 126 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST1H2BJP06899 126 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 IGLC3P0DOY3 106 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST1H2BOP23527 126 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST1H2BBP33778 126 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST1H2BDP58876 126 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST1H2BCP62807 126 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST2H2BEQ16778 126 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.63□□□□□ -1.03
COL1A1-208ENST00000494334 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST1H2BHQ93079 126 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 IFI27L1Q96BM0 104 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 PACRGQ96M98 296 aaPredicted RBP8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST1H2BNQ99877 126 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 HIST1H2BMQ99879 126 aa8.63□□□□□ -1.03
COL1A1-208ENST00000494334 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
COL1A1-208ENST00000494334 A0A096LNI7 61 aa8.62□□□□□ -1.03
COL1A1-208ENST00000494334 RNF151Q2KHN1 245 aa8.62□□□□□ -1.03
COL1A1-208ENST00000494334 SPACA4Q8TDM5 124 aa8.62□□□□□ -1.03
COL1A1-208ENST00000494334 DPH3Q96FX2 82 aa8.62□□□□□ -1.03
COL1A1-208ENST00000494334 TOMM7Q9P0U1 55 aa8.62□□□□□ -1.03
COL1A1-208ENST00000494334 IGKV2-24A0A0C4DH68 120 aa8.61□□□□□ -1.03
COL1A1-208ENST00000494334 SMIM1B2RUZ4 78 aa8.61□□□□□ -1.03
COL1A1-208ENST00000494334 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
COL1A1-208ENST00000494334 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
COL1A1-208ENST00000494334 Q8IZM0 81 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms