RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 LINC00242Q5T6M2 205 aa9.95□□□□□ -0.82
ACTB-213ENST00000493945 PET117Q6UWS5 81 aa9.95□□□□□ -0.82
ACTB-213ENST00000493945 LINC00469Q8N7U9 141 aa9.95□□□□□ -0.82
ACTB-213ENST00000493945 FAM104AQ969W3 186 aa9.95□□□□□ -0.82
ACTB-213ENST00000493945 IGHV1-58A0A0C4DH39 117 aa9.94□□□□□ -0.82
ACTB-213ENST00000493945 C5orf52A6NGY3 159 aa9.94□□□□□ -0.82
ACTB-213ENST00000493945 IGLC3P0DOY3 106 aa9.94□□□□□ -0.82
ACTB-213ENST00000493945 KRTDAPP60985 99 aa9.94□□□□□ -0.82
ACTB-213ENST00000493945 Q6ZRN7 208 aaPredicted RBP9.94□□□□□ -0.82
ACTB-213ENST00000493945 LINC01561Q8N1V8 128 aa9.94□□□□□ -0.82
ACTB-213ENST00000493945 A0A0J9YXV3 536 aa9.93□□□□□ -0.82
ACTB-213ENST00000493945 SYS1-DBNDD2H3BUS1 97 aa9.93□□□□□ -0.82
ACTB-213ENST00000493945 FOXI1Q12951 378 aa9.93□□□□□ -0.82
ACTB-213ENST00000493945 SPATA12Q7Z6I5 190 aa9.93□□□□□ -0.82
ACTB-213ENST00000493945 A0A087WZ39 114 aa9.92□□□□□ -0.82
ACTB-213ENST00000493945 IGHV3OR16-9A0A0B4J2B5 98 aa9.92□□□□□ -0.82
ACTB-213ENST00000493945 ZC2HC1BQ5TFG8 222 aa9.92□□□□□ -0.82
ACTB-213ENST00000493945 HIST1H2BLQ99880 126 aa9.92□□□□□ -0.82
ACTB-213ENST00000493945 DPM2O94777 84 aa9.91□□□□□ -0.82
ACTB-213ENST00000493945 HERVK_113P61574 105 aa9.91□□□□□ -0.82
ACTB-213ENST00000493945 TMEM170BQ5T4T1 132 aa9.91□□□□□ -0.82
ACTB-213ENST00000493945 OR10D4PQ8NGN7 298 aa9.91□□□□□ -0.82
ACTB-213ENST00000493945 IGLV5-45A0A087WSX0 123 aa9.9□□□□□ -0.82
ACTB-213ENST00000493945 USP17L23D6RBM5 183 aa9.9□□□□□ -0.82
ACTB-213ENST00000493945 ZNF561-AS1K7EIQ3 104 aa9.9□□□□□ -0.82
ACTB-213ENST00000493945 RTL8CO15255 209 aa9.9□□□□□ -0.82
ACTB-213ENST00000493945 PRSS2P07478 247 aa9.9□□□□□ -0.82
ACTB-213ENST00000493945 ODF1Q14990 250 aa9.9□□□□□ -0.82
ACTB-213ENST00000493945 C5orf38Q86SI9 138 aa9.9□□□□□ -0.82
ACTB-213ENST00000493945 MRPL35Q9NZE8 188 aaKnown RBP9.9□□□□□ -0.82
ACTB-213ENST00000493945 SACSQ9NZJ4 4579 aa9.89□□□□□ -0.83
ACTB-213ENST00000493945 IGKCP01834 107 aa9.89□□□□□ -0.83
ACTB-213ENST00000493945 C3orf79P0CE67 100 aa9.89□□□□□ -0.83
ACTB-213ENST00000493945 KRTAP26-1Q6PEX3 210 aa9.89□□□□□ -0.83
ACTB-213ENST00000493945 PKIGQ9Y2B9 76 aa9.89□□□□□ -0.83
ACTB-213ENST00000493945 KMT2AQ03164 3969 aa9.89□□□□□ -0.83
ACTB-213ENST00000493945 IGLV4-69A0A075B6H9 119 aa9.88□□□□□ -0.83
ACTB-213ENST00000493945 A0A087WTM6 91 aa9.88□□□□□ -0.83
ACTB-213ENST00000493945 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
ACTB-213ENST00000493945 hDV102S1A0JD36 115 aa9.88□□□□□ -0.83
ACTB-213ENST00000493945 F8WDY8 70 aa9.88□□□□□ -0.83
ACTB-213ENST00000493945 NTN5Q8WTR8 489 aaPredicted RBP9.88□□□□□ -0.83
ACTB-213ENST00000493945 ORAOV1Q8WV07 137 aa9.88□□□□□ -0.83
ACTB-213ENST00000493945 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
ACTB-213ENST00000493945 GVQW2A0A096LPI5 108 aaPredicted RBP9.87□□□□□ -0.83
ACTB-213ENST00000493945 C11orf86A6NJI1 115 aa9.87□□□□□ -0.83
ACTB-213ENST00000493945 SPAG11BQ08648 103 aa9.87□□□□□ -0.83
ACTB-213ENST00000493945 LINC01545Q5VT33 79 aa9.87□□□□□ -0.83
ACTB-213ENST00000493945 SFTA2Q6UW10 78 aa9.87□□□□□ -0.83
ACTB-213ENST00000493945 IGHV3-64A0A075B6Q5 118 aa9.86□□□□□ -0.83
ACTB-213ENST00000493945 ZNF22P17026 224 aaPredicted RBP9.86□□□□□ -0.83
ACTB-213ENST00000493945 CXCL5P42830 114 aa9.86□□□□□ -0.83
ACTB-213ENST00000493945 COX6A2Q02221 97 aa9.86□□□□□ -0.83
ACTB-213ENST00000493945 Q8N814 137 aa9.86□□□□□ -0.83
ACTB-213ENST00000493945 KMT2CQ8NEZ4 4911 aaKnown RBP9.85□□□□□ -0.83
ACTB-213ENST00000493945 LRCOL1A6NCL2 159 aa9.85□□□□□ -0.83
ACTB-213ENST00000493945 LECT2O14960 151 aa9.85□□□□□ -0.83
ACTB-213ENST00000493945 TNP2Q05952 138 aa9.85□□□□□ -0.83
ACTB-213ENST00000493945 CDPF1Q6NVV7 123 aa9.85□□□□□ -0.83
ACTB-213ENST00000493945 HSBP1L1C9JCN9 74 aa9.84□□□□□ -0.83
ACTB-213ENST00000493945 CKS1BP61024 79 aa9.84□□□□□ -0.83
ACTB-213ENST00000493945 Q8IZM0 81 aa9.84□□□□□ -0.83
ACTB-213ENST00000493945 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
ACTB-213ENST00000493945 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
ACTB-213ENST00000493945 SMIM1B2RUZ4 78 aa9.83□□□□□ -0.84
ACTB-213ENST00000493945 HIGD2BQ4VC39 106 aa9.83□□□□□ -0.84
ACTB-213ENST00000493945 C6orf226Q5I0X4 101 aa9.83□□□□□ -0.84
ACTB-213ENST00000493945 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
ACTB-213ENST00000493945 C2orf48Q96LS8 159 aa9.83□□□□□ -0.84
ACTB-213ENST00000493945 RYR2Q92736 4967 aa9.83□□□□□ -0.84
ACTB-213ENST00000493945 NDUFA1O15239 70 aa9.82□□□□□ -0.84
ACTB-213ENST00000493945 SCGB1D1O95968 90 aa9.82□□□□□ -0.84
ACTB-213ENST00000493945 SPINK8P0C7L1 97 aa9.82□□□□□ -0.84
ACTB-213ENST00000493945 CAMK2N2Q96S95 79 aa9.82□□□□□ -0.84
ACTB-213ENST00000493945 PMCHL2Q9BQD1 86 aa9.82□□□□□ -0.84
ACTB-213ENST00000493945 PGPEP1Q9NXJ5 209 aa9.82□□□□□ -0.84
ACTB-213ENST00000493945 IGLV5-52A0A0A0MRZ9 124 aa9.81□□□□□ -0.84
ACTB-213ENST00000493945 TMEM223A0PJW6 202 aa9.81□□□□□ -0.84
ACTB-213ENST00000493945 COX7B2Q8TF08 81 aa9.81□□□□□ -0.84
ACTB-213ENST00000493945 PLEKHB2Q96CS7 222 aa9.81□□□□□ -0.84
ACTB-213ENST00000493945 HYDINQ4G0P3 5121 aa9.81□□□□□ -0.84
ACTB-213ENST00000493945 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.8□□□□□ -0.84
ACTB-213ENST00000493945 CNBPP62633 177 aaKnown RBP9.8□□□□□ -0.84
ACTB-213ENST00000493945 CARD19Q96LW7 228 aa9.8□□□□□ -0.84
ACTB-213ENST00000493945 SYCNQ0VAF6 134 aa9.79□□□□□ -0.84
ACTB-213ENST00000493945 IGLV5-39A0A0G2JS06 123 aa9.78□□□□□ -0.84
ACTB-213ENST00000493945 LGALS3P17931 250 aaKnown RBP9.78□□□□□ -0.84
ACTB-213ENST00000493945 WFDC2Q14508 124 aa9.78□□□□□ -0.84
ACTB-213ENST00000493945 TRBV30A0A0K0K1B3 111 aa9.77□□□□□ -0.85
ACTB-213ENST00000493945 LEPROTO15243 131 aa9.77□□□□□ -0.85
ACTB-213ENST00000493945 NMUP48645 174 aa9.77□□□□□ -0.85
ACTB-213ENST00000493945 LINC00587B1AMM8 73 aa9.76□□□□□ -0.85
ACTB-213ENST00000493945 E9PLD3 99 aa9.75□□□□□ -0.85
ACTB-213ENST00000493945 HERV-K104P63124 156 aa9.75□□□□□ -0.85
ACTB-213ENST00000493945 RNF151Q2KHN1 245 aa9.75□□□□□ -0.85
ACTB-213ENST00000493945 MYMXA0A1B0GTQ4 84 aa9.74□□□□□ -0.85
ACTB-213ENST00000493945 JOSD1Q15040 202 aaPredicted RBP9.74□□□□□ -0.85
ACTB-213ENST00000493945 J3QQQ9 107 aa9.73□□□□□ -0.85
ACTB-213ENST00000493945 KIAA0087Q14695 138 aa9.73□□□□□ -0.85
ACTB-213ENST00000493945 FRAS1Q86XX4 4008 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms