RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 SNURFQ9Y675 71 aa14.7□□□□□ -0.06
RNF40-203ENST00000493683 POM121L12Q8N7R1 296 aa14.69□□□□□ -0.06
RNF40-203ENST00000493683 SMIM26A0A096LP01 95 aa14.69□□□□□ -0.06
RNF40-203ENST00000493683 WFDC13Q8IUB5 93 aa14.69□□□□□ -0.06
RNF40-203ENST00000493683 NAV2Q8IVL1 2488 aa14.69□□□□□ -0.06
RNF40-203ENST00000493683 NTM-AS1Q6ZSK4 140 aa14.68□□□□□ -0.06
RNF40-203ENST00000493683 SERP1Q9Y6X1 66 aa14.68□□□□□ -0.06
RNF40-203ENST00000493683 LINC01006Q8NI28 216 aa14.68□□□□□ -0.06
RNF40-203ENST00000493683 TRAV7A0A075B6U4 112 aa14.68□□□□□ -0.06
RNF40-203ENST00000493683 CCDC179H3BU77 68 aa14.67□□□□□ -0.06
RNF40-203ENST00000493683 A6NED7 52 aa14.67□□□□□ -0.06
RNF40-203ENST00000493683 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.67□□□□□ -0.06
RNF40-203ENST00000493683 A0A0U1RQV1 116 aa14.66□□□□□ -0.06
RNF40-203ENST00000493683 RPL28P46779 137 aaKnown RBP14.66□□□□□ -0.06
RNF40-203ENST00000493683 ZNF843Q8N446 348 aa14.66□□□□□ -0.06
RNF40-203ENST00000493683 DSCAML1Q8TD84 2053 aa14.66□□□□□ -0.06
RNF40-203ENST00000493683 LRCOL1A6NCL2 159 aa14.65□□□□□ -0.06
RNF40-203ENST00000493683 LINC00242Q5T6M2 205 aa14.65□□□□□ -0.06
RNF40-203ENST00000493683 EGFEM1PQ0D2K5 195 aa14.65□□□□□ -0.06
RNF40-203ENST00000493683 LOC100131303A0A0U1RQF7 123 aa14.65□□□□□ -0.06
RNF40-203ENST00000493683 COX8CQ7Z4L0 72 aa14.64□□□□□ -0.07
RNF40-203ENST00000493683 CRIP2P52943 208 aaPredicted RBP14.64□□□□□ -0.07
RNF40-203ENST00000493683 DSCAMO60469 2012 aa14.63□□□□□ -0.07
RNF40-203ENST00000493683 LY6G6DO95868 133 aa14.63□□□□□ -0.07
RNF40-203ENST00000493683 NUP210LQ5VU65 1888 aa14.63□□□□□ -0.07
RNF40-203ENST00000493683 GAS8-AS1O95177 125 aa14.63□□□□□ -0.07
RNF40-203ENST00000493683 LINC00310P59036 64 aa14.63□□□□□ -0.07
RNF40-203ENST00000493683 MED12LQ86YW9 2145 aa14.63□□□□□ -0.07
RNF40-203ENST00000493683 CLUHP3Q96NS8 147 aa14.62□□□□□ -0.07
RNF40-203ENST00000493683 CYSRT1A8MQ03 144 aa14.62□□□□□ -0.07
RNF40-203ENST00000493683 PRO3102Q9H379 93 aa14.62□□□□□ -0.07
RNF40-203ENST00000493683 BRI3O95415 125 aa14.61□□□□□ -0.07
RNF40-203ENST00000493683 CSDC2Q9Y534 153 aaKnown RBP14.61□□□□□ -0.07
RNF40-203ENST00000493683 SMIM1B2RUZ4 78 aa14.61□□□□□ -0.07
RNF40-203ENST00000493683 Q8N814 137 aa14.61□□□□□ -0.07
RNF40-203ENST00000493683 URB1-AS1Q96HZ7 61 aa14.6□□□□□ -0.07
RNF40-203ENST00000493683 PPDPFQ9H3Y8 114 aa14.6□□□□□ -0.07
RNF40-203ENST00000493683 HIVEP3Q5T1R4 2406 aa14.6□□□□□ -0.07
RNF40-203ENST00000493683 F8WDY8 70 aa14.6□□□□□ -0.07
RNF40-203ENST00000493683 PLAC8L1A1L4L8 177 aa14.59□□□□□ -0.07
RNF40-203ENST00000493683 LINC00526Q96FQ7 95 aa14.59□□□□□ -0.07
RNF40-203ENST00000493683 C10orf25Q5T742 122 aa14.59□□□□□ -0.07
RNF40-203ENST00000493683 SPINK6Q6UWN8 80 aa14.58□□□□□ -0.08
RNF40-203ENST00000493683 ZNF580Q9UK33 172 aa14.58□□□□□ -0.08
RNF40-203ENST00000493683 CCDC168Q8NDH2 2452 aa14.57□□□□□ -0.08
RNF40-203ENST00000493683 RPL37AP8A6NKH3 93 aa14.56□□□□□ -0.08
RNF40-203ENST00000493683 A0A0J9YWU9 116 aa14.56□□□□□ -0.08
RNF40-203ENST00000493683 AMELXQ99217 191 aa14.55□□□□□ -0.08
RNF40-203ENST00000493683 FAM30AQ9NZY2 134 aa14.55□□□□□ -0.08
RNF40-203ENST00000493683 PIEZO1Q92508 2521 aa14.55□□□□□ -0.08
RNF40-203ENST00000493683 M0QXV9 152 aa14.55□□□□□ -0.08
RNF40-203ENST00000493683 C1orf195Q5TG92 126 aa14.54□□□□□ -0.08
RNF40-203ENST00000493683 WFDC10AQ9H1F0 79 aa14.54□□□□□ -0.08
RNF40-203ENST00000493683 C18orf65Q6ZTR6 163 aa14.53□□□□□ -0.08
RNF40-203ENST00000493683 C2CD3Q4AC94 2353 aa14.53□□□□□ -0.08
RNF40-203ENST00000493683 KIAA1549Q9HCM3 1950 aa14.53□□□□□ -0.08
RNF40-203ENST00000493683 DOPEY1Q5JWR5 2465 aa14.53□□□□□ -0.08
RNF40-203ENST00000493683 ODF3L2Q3SX64 289 aa14.52□□□□□ -0.08
RNF40-203ENST00000493683 C1orf137Q5JT78 98 aa14.52□□□□□ -0.08
RNF40-203ENST00000493683 LINC00694P0DN24 101 aa14.52□□□□□ -0.09
RNF40-203ENST00000493683 LINC01561Q8N1V8 128 aa14.51□□□□□ -0.09
RNF40-203ENST00000493683 COL4A4P53420 1690 aaPredicted RBP14.51□□□□□ -0.09
RNF40-203ENST00000493683 UNQ6190/PRO20217Q6UXQ8 127 aa14.51□□□□□ -0.09
RNF40-203ENST00000493683 PRR4Q16378 134 aa14.5□□□□□ -0.09
RNF40-203ENST00000493683 PLXNB1O43157 2135 aa14.5□□□□□ -0.09
RNF40-203ENST00000493683 IGLV9-49A0A0B4J1Y8 123 aa14.49□□□□□ -0.09
RNF40-203ENST00000493683 TRBV10-3A0A0K0K1G6 114 aa14.49□□□□□ -0.09
RNF40-203ENST00000493683 C10orf142B7Z368 130 aa14.49□□□□□ -0.09
RNF40-203ENST00000493683 REG3GQ6UW15 175 aa14.48□□□□□ -0.09
RNF40-203ENST00000493683 HRCT1Q6UXD1 115 aa14.47□□□□□ -0.09
RNF40-203ENST00000493683 PRYO14603 147 aa14.47□□□□□ -0.09
RNF40-203ENST00000493683 IGLV2-18A0A075B6J9 118 aa14.47□□□□□ -0.09
RNF40-203ENST00000493683 BEAN1Q3B7T3 259 aa14.47□□□□□ -0.09
RNF40-203ENST00000493683 TSPEAR-AS2P59090 65 aa14.47□□□□□ -0.09
RNF40-203ENST00000493683 IGLV1-51P01701 117 aa14.47□□□□□ -0.09
RNF40-203ENST00000493683 PRM2P04554 102 aa14.46□□□□□ -0.09
RNF40-203ENST00000493683 IGHV4-30-4P0DP06 118 aa14.46□□□□□ -0.09
RNF40-203ENST00000493683 A0A087WYN8 130 aa14.45□□□□□ -0.1
RNF40-203ENST00000493683 ABCA2Q9BZC7 2435 aa14.44□□□□□ -0.1
RNF40-203ENST00000493683 COX6A2Q02221 97 aa14.44□□□□□ -0.1
RNF40-203ENST00000493683 LINC00208Q96KT6 92 aa14.44□□□□□ -0.1
RNF40-203ENST00000493683 CELA1Q9UNI1 258 aa14.44□□□□□ -0.1
RNF40-203ENST00000493683 A0A1B0GUV1 79 aa14.44□□□□□ -0.1
RNF40-203ENST00000493683 MUC22E2RYF6 1773 aaPredicted RBP14.44□□□□□ -0.1
RNF40-203ENST00000493683 C2orf48Q96LS8 159 aa14.43□□□□□ -0.1
RNF40-203ENST00000493683 NANOS2P60321 138 aaKnown RBP14.43□□□□□ -0.1
RNF40-203ENST00000493683 FHL2Q14192 279 aa14.42□□□□□ -0.1
RNF40-203ENST00000493683 ESRGQ1W209 222 aa14.42□□□□□ -0.1
RNF40-203ENST00000493683 ADAMTSL4-AS1Q5T5F5 129 aa14.42□□□□□ -0.1
RNF40-203ENST00000493683 PCDH15Q96QU1 1955 aa14.41□□□□□ -0.1
RNF40-203ENST00000493683 HCFC1P51610 2035 aa14.41□□□□□ -0.1
RNF40-203ENST00000493683 A0A096LNJ9 63 aa14.41□□□□□ -0.1
RNF40-203ENST00000493683 ATG2AQ2TAZ0 1938 aa14.41□□□□□ -0.1
RNF40-203ENST00000493683 Q8N3U1 123 aa14.41□□□□□ -0.1
RNF40-203ENST00000493683 PCNX3Q9H6A9 2034 aa14.41□□□□□ -0.1
RNF40-203ENST00000493683 IGLV4-60A0A075B6I1 120 aa14.4□□□□□ -0.1
RNF40-203ENST00000493683 NUPR2A6NF83 97 aa14.4□□□□□ -0.1
RNF40-203ENST00000493683 MYO9AB2RTY4 2548 aa14.4□□□□□ -0.11
RNF40-203ENST00000493683 M0R2N4 97 aa14.39□□□□□ -0.11
RNF40-203ENST00000493683 LY6G6CO95867 125 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms